Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01211 ATGAGAACGTCGTCGTTTGGGAGATGCAGCACCGACGAGTTCGAGTTGCGGGAAAATTACGGCAATTCGTCGCCGACGGCCGGAGGACACGTATACGGCGCCATGTTACCGGTGTTCCTCAACGACCTGCGGACCAATCACCACAAGGAGCTCGTGGAGATCACTCTGGAGCTCGAAAACGACGCCGTTGTGCTGTGTAATCTCGCGCCGGCGCCCTCGTCTGCTCCGAACGCCTCGCCGTTGTCCAGCGTTGCCGGAGGCAGCGACGGCGCCGTCGTGGAGCGGAGTCTCTCGATTACGTCGAGGATTCGGCGGAAGTTTCCGTGGCTGAGGTCGATGTCGTCGGCGTCCGTGGAGAGCGGTGCCGTCGCCGTCGCGGAGGATCCGGCGGTGACGGCGCGAAACGCGAGGAAGATGAGAGCGAAGCTTGAACGGACGAGGTCGAGCGCCCAGAGAGCTTTGAAAGGTTTGAGATTCATCAGTAAGTCAGGTGAGGCCAGCGAGGAGTTGTGGCGAAAGGTTGAAGAAAGGTTCAGCTTGTTGGCCAAGGATGGGTTACTCCCTCGTGAAGACTTTGGTGAATGCATAGGGATGGAGGATTCGAAAGAGTTTGCAGTGTGTATATTCGATGCATTGGCTAGAAGGAAGGAAAAGAGAGCGAGTAGCATAAACAGAGAAGAGCTGCATCAGTTCTGGTTGCAAATTTCAGACCAAAGCTTCGATGCTCGTCTTCAAATTTTCTTTGACATGGCAGACAGTAATGAAGACGGAAGAATTACTAGGGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCAGCAAACAAGCTATCGAAGCTAAAAGAACAAGCTGAGGGATACGCTGCGTTAATAATGGAAGAATTAGATCCAGAAAATCTGGGTTATATAGAGTTGTGGCAGCTAGAAATGTTGTTACTAGAAAAGGATAGGTACATGAACTACAGCGGACAACTCAGCACAGCAAGTGTAAACTGGAATCAAAATATGACCGAATCGAGGCCTAGAAATGAAATACAAAGACTCTTCAGGACCCTTCAATGTCTTGCGTTAGAGTATTGGAGAAGAGGCTGGATTTTGTTACTGTGGTTGGTCACCACTGCTTGCCTATTTAGCTGGAAGTTTTACCAGTATAGAAACAAATCAACTTTCGAAGTTATGAACTACTGTATACCAGTGGCTAAGGGTGCTGCAGAGACATTGAAGCTCAACATGGCCCTCATTCTCTTACCAGTTTGTCGAAATACTTTGACATGGCTTCGTTCGACAAGAGCCAGGAAATTTGTCCCTTTTGATGACAATATTAATTTCCACAAGATGATTGCATTTGCCATAGCTGTTGGAGTCGCAGTTCATGCAGGGAACCATTTAGCATGTGATTTTCCTCTTCTCGTAAACTCATCACCAGAAAAATTTTCACTTATATCTTCAGATTTCAATAAAAAACCCACATACTATTCACTTCTGACCGGTATTGAAGGCGTCACTGGAATCTCAATGGTTATTTTGATGGCTATCTCTTTCACTTTAGCAACTCATCACTTTCGGAGAAACGCAGTCAGGCTTCCTTCACCCTTTAACAGATTGACAGGCTTCAATGCATTTTGGTACTCTCACCACCTTTTTGGTCTGGTCTATGTTCTACTCCTCATCCATGGAACATTCTTGTATTTAACTCATCGGTGGTACCAGAAAACGACATGGATGTATATCTGTGTTCCTCTGTTGCTGTACATAGCAGAGCGTACTCTACGGACTCGAAGATCAGCACATTATACAGTAAAAATCCTGAAGCAGGTTTCTTGGCTACCAGGAAACGTTTTCAGCTTAGTCATGTCCAAGCCTAGTGGATTCAAGTACAAAAGCGGACAGTACATATTTTTACAATGCCCAAAAATCTCTCCATTTGAGTGGCACCCATTCTCAATTACATCAGCCCCAGGAGATGACTATTTAAGCGTTCACATTCGCACAGTGGGAGACTGGACCCAAGAACTCAAGCATCTTCTCACAAAAGAAGATGACCATCAACTACCTTCGGTTAATTGTCGTGCAACGTTTGCTGAACTAATGCAACTGGATCAAAGAGGACAGCCGAAACTCCTTGTTGATGGTCCATATGGAGCTCCAGCACAAGACTACCAGAATTTTGATGTACTCCTCCTCATAGGATTAGGAATTGGAGCGACTCCATTCATTAGCATTCTCCGAGATCTTCTCAGTAACACCAGACCAATGGATGAACTAGTGGTGCAGGAGTCAAATACAGAAACAAGTCAAACAACGAGATCAGACGAGAGCTCCAATAGTTTTACATCTTCAAATTTAACTCCAGGAGGAAATAAGAGATCAAGAAGGACAACAAATGCTTATTTCTACTGGGTCACTAGGGAACCTGGATCTTTTGAATGGTTCAAAGGAGTAATGGACGAAGTTGCAGAAATGGACCACAAAGGTCAAATTGAACTTCACAACTATCTTACTAGTGTCTATGAAGAGGGAGATGCGAGATCAACGTTAATAACCATGATCCAAGCACTGAACCATGCGAAACATGGTGTTGACATCCTATCAGGCACTCGAGTAAGGACACACTTTGCTAGGCCTAATTGGAAAGAAGTTTTCACCAAGATTGCCTCTAAACACCCGTTTTCTACAGTAGGCGTGTTCTATTGCGGGATGCCAGTATTGGCGAAGGAGCTAAAGAAGCTATCACTTGAGCTGAGCCACAAGACATCTACTCGCTTTGAGTTTCACAAGGAGTACTTTTGA 2790 0.4566 MRTSSFGRCSTDEFELRENYGNSSPTAGGHVYGAMLPVFLNDLRTNHHKELVEITLELENDAVVLCNLAPAPSSAPNASPLSSVAGGSDGAVVERSLSITSRIRRKFPWLRSMSSASVESGAVAVAEDPAVTARNARKMRAKLERTRSSAQRALKGLRFISKSGEASEELWRKVEERFSLLAKDGLLPREDFGECIGMEDSKEFAVCIFDALARRKEKRASSINREELHQFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYAALIMEELDPENLGYIELWQLEMLLLEKDRYMNYSGQLSTASVNWNQNMTESRPRNEIQRLFRTLQCLALEYWRRGWILLLWLVTTACLFSWKFYQYRNKSTFEVMNYCIPVAKGAAETLKLNMALILLPVCRNTLTWLRSTRARKFVPFDDNINFHKMIAFAIAVGVAVHAGNHLACDFPLLVNSSPEKFSLISSDFNKKPTYYSLLTGIEGVTGISMVILMAISFTLATHHFRRNAVRLPSPFNRLTGFNAFWYSHHLFGLVYVLLLIHGTFLYLTHRWYQKTTWMYICVPLLLYIAERTLRTRRSAHYTVKILKQVSWLPGNVFSLVMSKPSGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDDYLSVHIRTVGDWTQELKHLLTKEDDHQLPSVNCRATFAELMQLDQRGQPKLLVDGPYGAPAQDYQNFDVLLLIGLGIGATPFISILRDLLSNTRPMDELVVQESNTETSQTTRSDESSNSFTSSNLTPGGNKRSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFTKIASKHPFSTVGVFYCGMPVLAKELKKLSLELSHKTSTRFEFHKEYF 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01211 929 Gene3D - 714 929 IPR039261 -
Pste2g01211 929 Coils Coil 133 153 - -
Pste2g01211 929 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 593 719 IPR017927 GO:0016491
Pste2g01211 929 FunFam Respiratory burst oxidase homolog A 586 679 - -
Pste2g01211 929 Pfam Ferric reductase like transmembrane component 402 556 IPR013130 -
Pste2g01211 929 PANTHER NADPH OXIDASE 204 929 - -
Pste2g01211 929 ProSitePatterns EF-hand calcium-binding domain. 252 264 IPR018247 -
Pste2g01211 929 Gene3D Translation factors 584 684 - -
Pste2g01211 929 FunFam Respiratory burst oxidase homolog A 143 260 - -
Pste2g01211 929 Pfam Respiratory burst NADPH oxidase 142 242 IPR013623 GO:0004601|GO:0050664
Pste2g01211 929 PRINTS Cytochrome B-245 heavy chain signature 728 745 IPR000778 GO:0016020|GO:0016491
Pste2g01211 929 PRINTS Cytochrome B-245 heavy chain signature 538 558 IPR000778 GO:0016020|GO:0016491
Pste2g01211 929 PRINTS Cytochrome B-245 heavy chain signature 705 718 IPR000778 GO:0016020|GO:0016491
Pste2g01211 929 PRINTS Cytochrome B-245 heavy chain signature 447 465 IPR000778 GO:0016020|GO:0016491
Pste2g01211 929 Pfam FAD-binding domain 604 716 IPR013112 GO:0016491
Pste2g01211 929 CDD EFh 222 269 IPR002048 GO:0005509
Pste2g01211 929 SUPERFAMILY Riboflavin synthase domain-like 604 716 IPR017938 -
Pste2g01211 929 ProSiteProfiles EF-hand calcium-binding domain profile. 239 274 IPR002048 GO:0005509
Pste2g01211 929 MobiDBLite consensus disorder prediction 757 789 - -
Pste2g01211 929 SFLD NADPH oxidase subgroup (NOX) 137 929 - -
Pste2g01211 929 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 722 929 IPR039261 -
Pste2g01211 929 SUPERFAMILY EF-hand 159 324 IPR011992 -
Pste2g01211 929 CDD NOX_Duox_like_FAD_NADP 611 881 - -
Pste2g01211 929 FunFam Respiratory burst oxidase protein E 714 929 - -
Pste2g01211 929 Gene3D - 143 260 - -
Pste2g01211 929 Pfam Ferric reductase NAD binding domain 723 911 IPR013121 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01211 Pste-Chr2 13190615 13199583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01211 23 929 Miscellaneous Gene Families AT1G19230 62.211 0.0 1159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01211 2 13190615 13199583 Pste2g01211 2 13190615 13199583 ECH