Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01135 TTTCCATGTAAGGTTAACTTGTTCACTTTCTGCATAAAAAACAATCTACACATATGATTAGCAAGTAAACTTTGATTTTGAAGAAAAGGGTTAGTGGTAAATTGGTCAAACTTCTGACCCAGTAGCTATTAGGTGTAAAAATTGCAAAACCCGTATTATAGTTTAGTTTTATATACCAAAGGTTTGTTACCCCCCTGTGTTGTGTATGCCTATACCCTTGCATCAGGTGTGAATTTTTCAATTTTCTTTAGTAATGGTTATCACTTTTGATTTTAGACTTTCAATATTTCGTTAACTGCAATATGTGAACCTTGAAGTTCTTTATGTTTTGCTTCTTTGCTTTTGTTTATAAATCATTTTGTTGCATATGTAGCTTAGTAGCTGACATTTAAAGGAACTTGTGGCTTTTAAACATTAAGGATAGTGTGATTGTTAGTAATTAATATGCAGCTTTTATCTTGCTTCTGCTGAACTTTTTCAAATATGTTGAACCAGATGAGTTGTAAGTATGGGATTCAAGTATCTGCTGGTTGTTGTGTGTTTTTGCGCATGGTTTGGATCACTGACTTTTGCAACTTCTAATGATGGGAGATTGGTGAGGTTTGGTCTAAAAAGGAGGAATTTAGAGCTTCAGAGTCTTAAAGCTGCAAGAATCAAAGAGGCCGTTCATATCAGAGATTTAGGGGTTGCTAATAAAAATTGTTGTGACGAAGATATAGTATATCTCAAGAATTATCTAGATGCTCAATATTTTGGGGAGATTAGCATTGGTTCTCCCCCACAATACTTCAATGTTGTTTTTGACACCGGCAGCTCAAATCTTTGGGTCCCATCTTCCAAATGCGTCTTCTCTATTGCTTGCTATTTACATGCCAAGTATAGGTCGAAGATATCTAGCACCTATACCGAAATTGGAATACCTTGCAAAATCCCTTATGACCAAGGATCTATTTTTGGGTTCTTCAGCCAGGATAATGTACAAGTTGGGGATATTATCATCAAAGATCAAGAATTTGCTGAGATTACAAGGGAAGGGTCGATGGAACTTGCAACACTTCCATTTGATGGCATACTTGGACTTGGATTCCAGGATATTTCAATTGGAAAAGTCACACCAGTGTGGCATTTTAGAGGAGACCACACATACGTTCCACTTTCTCACAAAAGTTATTGGCAGATTGATTTGGGAGATACTCTACTTGCAAATAATTCAACAGGGCTATGTGAGGGTGGCTGTGCTGCAATTGTGGACTCAGGGACATCTTTAATTGCTGGTCCAACTCTAATTCCTGACATTATATGCAGTGACATTGGACTCTGTTCATATAATGAATTTTATAATACGGATGATGTTATTGAAACAGTGGTGCATAATCAAAGTTGGAACGGGTCACAAAAAAGGGAGAGCCCCCTTTGTAGTTTTTGCAATATGGTTGTACTTTGGATCCAAGTTCAGATTAAGCAAAGCAATGTAAAAGAAAAAGTATTAAAATTTGTGGATGAGCTGTGTGAGAAGCTCCCTAATCCTCCAGGACAATCATTTATAAACTGCAATTCTATTGCAACTATGCCGTACATTACATTCACCATTGGAAACAAATCCTTTCCCCTCTCTCCAGAACAGGGTCCCCTCTGGGTTCTTGGAAGTATTTTCTTGGGAGCATATCATACAGTATTTGACTATGGCAATCTCCGTATAGGATTTGCAGAAGCTGCATAGTAATAGTTTGGTGATATCACTGTTCCAAATTCTTTGTGAATAAAAAAAAAAAAAAATGGAGGTCTACATGATTCACTACAACAAATAACTATAGCAGTCCTTCAGAATTTGTCTCAGGGTCTCTTGTAAATGGTTATTGGTATATTTATGAATAAGATTTGCGATATTTGTTCACAAGGATTAAATTGGGGGAAAAGCATATAAGGGAGCTTAATTTTCAAGAGAGAAGTGTTGACTATAAAGTTATTTTGCAGTTCTTTATAAAATGTCAAAACACTTCATAAAAAGAGAGAGCAAAGAGTCCAATGAAGGTTGATCCAGTAAGTAAGAATAACGTTTATATCCCACAAAGACATGAGTTCAAATGTAT 2090 0.3608 MGFKYLLVVVCFCAWFGSLTFATSNDGRLVRFGLKRRNLELQSLKAARIKEAVHIRDLGVANKNCCDEDIVYLKNYLDAQYFGEISIGSPPQYFNVVFDTGSSNLWVPSSKCVFSIACYLHAKYRSKISSTYTEIGIPCKIPYDQGSIFGFFSQDNVQVGDIIIKDQEFAEITREGSMELATLPFDGILGLGFQDISIGKVTPVWHFRGDHTYVPLSHKSYWQIDLGDTLLANNSTGLCEGGCAAIVDSGTSLIAGPTLIPDIICSDIGLCSYNEFYNTDDVIETVVHNQSWNGSQKRESPLCSFCNMVVLWIQVQIKQSNVKEKVLKFVDELCEKLPNPPGQSFINCNSIATMPYITFTIGNKSFPLSPEQGPLWVLGSIFLGAYHTVFDYGNLRIGFAEAA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01135 403 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 96 107 IPR001969 GO:0004190|GO:0006508
Pste2g01135 403 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 19 206 IPR001461 GO:0004190|GO:0006508
Pste2g01135 403 SUPERFAMILY Acid proteases 4 402 IPR021109 -
Pste2g01135 403 Pfam Saposin-like type B, region 1 301 338 IPR007856 GO:0006629
Pste2g01135 403 SUPERFAMILY Saposin 243 338 IPR011001 -
Pste2g01135 403 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 245 256 IPR001969 GO:0004190|GO:0006508
Pste2g01135 403 FunFam Cathepsin D 81 207 - -
Pste2g01135 403 Gene3D - 303 364 - -
Pste2g01135 403 ProSiteProfiles Saposin B type domain profile. 299 340 IPR008139 -
Pste2g01135 403 Pfam Eukaryotic aspartyl protease 80 206 IPR033121 -
Pste2g01135 403 Gene3D Acid Proteases 369 403 IPR021109 -
Pste2g01135 403 PRINTS Pepsin (A1) aspartic protease family signature 376 391 IPR001461 GO:0004190|GO:0006508
Pste2g01135 403 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Pste2g01135 403 PRINTS Pepsin (A1) aspartic protease family signature 245 256 IPR001461 GO:0004190|GO:0006508
Pste2g01135 403 Pfam Eukaryotic aspartyl protease 369 402 IPR033121 -
Pste2g01135 403 Gene3D Acid Proteases 209 302 IPR021109 -
Pste2g01135 403 ProSiteProfiles Peptidase family A1 domain profile. 81 400 IPR033121 -
Pste2g01135 403 Gene3D Acid Proteases 30 208 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01135 Pste-Chr2 12357473 12362306 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01135 2 12357473 12362306 Pste2g01135 2 12357473 12362306 ECH