Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00589 TGAGTCGGTCACCATAGCCCCAAGCTTGATGAAAACGGTGGAACCAGACACATTGAGTCTCGGTCATGGAAATTCACCTTTGTCAGTAACCTTAGAAGGATCAGATTTTGTGGCGAACGGGCACCCATTTCTGAGCGAAGTCCCCGGCAACATAATAGCCACCCCTTTGCCCTCTCTCTATTCCAAACCCAACGACAGTGTGGTGGGTTGCTTCGTGGGGTTCGACGCGGACGAGCCCAGAAGCCGACACGTGGCAGCGCTGGGCAAACTCAAGGGAATAAGGTTCATGAGCATATTCCGGTTCAAGGTGTGGTGGACCACTCACTGGGTCGGAACCAACGGGCACCAAGTGGAGCACGAAACCCAGATGATACTTCTTGACAAAAATGACTCGCTTGGACGCCCCTACCTGCTCCTACTTCCCATCCTCCAAGGTTCCTTCCGAGCCTCCCTTCAGCCCGGTTTCCATGACTACGTGGACCTTTGCCTTGAGAGCGGTTCCACACGTGTCGCTGCCTCCAGCTTCCGGAGCTGCTTGTACGTCCACGTCAGCCACGACCCCTATGGCTTGCTCAGAGAAGCAACCAAAGTCCTTAGTATGCATTTGGGCACTTTTAAGCTACTCGACCAGAAAACCCCTCCTGCGATTATAGACAAGTTTGGTTGGTGTACGTGGGACGCGTTTTACTTGAAGGTTCACCCCACAGGGGTGTGGGAAGGGGTGAAAGGGCTTACGGAAGGAGGGTGTCCTCCGGGGATGGTCCTAATCGACGACGGGTGGCAATCCATTTGTCATGATGAGGACCCCATAACGGACCGAGAGGGTGTGAACCGAACCTCCGCTGGGGAGCAAATGCCCTGCAGGCTCGTCAAGTTCGAGGAAAATTACAAATTCAGAGATTACTGCAGTATGAAGGGCCCTGAGAAGGGTATGGGTGCGTTTGTTAGGGACTTGAAGGAGCGGTTCAAGAGCGTGGAGCAGGTGTATGTTTGGCACGCGCTATGTGGATACTGGGGAGGGGTGAGACCTAAGGTTCCGGGCATGCCCGAAGCTAAGGTGGTGACTCCGAAGCTGTCCAAGGGGCTGAAAATGACAATGGAAGATTTGGCGCTGGATAAGATCGTGAATAACGGTGTGGGACTCGTGCCACCTCACCTCGCTCACCACTTGTACGAGGGGCTCCATTCCCGTTTGGAATCGGCGGGAATTGACGGCGTCAAGGTTGACGTTATACACTTGCTTGAGATGGTATCTGAGGAATACGGTGGGCGTGTTGAGCTGGCCAAAGCTTATTACAAAGCACTCACTGCTTCTGTGAAGAAGCATTTCAAAGGCAATGGAGAGATGATTTTTGGTGCACTGATCCATCTGGAGATCCAAAGGGCACGTATTGGCTCCAAGGTTGTCACATGGTGCACTGTGCCTACAACAGCTTGTGGATGGGAAATTTTATTCACCCAGATTGGGACATGTTCCAGTCCACTCACCCTTGTGCTGAATTCCATGCCGCTTCTAGGGCCATCTCTGGTGGACCCATTTACGTTAGCGATTGTGTTGGAAAGCACAACTTCAAGTTGCTCAAGAGCCTCGCTTTGCCTGATGGCTCCATCTTGCGTTTATACAGGTGTTTTGGGTCTATTTAATTGCCAAGGAGGTGGGTGGTGTCCTGTGACTCGACGAAACAAGAGTGCCTCTGAGTTTTCACACAGTGTGACATGCTTAGCAAGTCCTCAAGATATTGAATGGAGCAATGGAAAAAACCCAATATGTGTAAAAGGGACAGATGTGGTTGCTGTTTATTTGTTCAAAGACAGCAAACTAAAGGTGATGAAGGCATCAGAACACTTGGAAGTTTCACTTGAGCCATTTAGTTTCGAGCTATTGACAGTGTCTCCAGTGATTGTGTTATTGAATAGTTTAATTCAATTTGCTCCAATTGGATTAGTGAACATGCTTAACTCCGGTGGTGCCATTCAATCCATGGAGTTTGAGGACCTCACAACAGTCACAGGCGTGGTCAAAATTGGAATTAGAGGTTGTGGGGAGATGAGGGTGTTTGCATCAGAGAAGCCAATTAATTGCAAAATAGATGGGGTAGCTGTGAAATTTGATTATGAGGATAAGTTAGTGAGAGTGCAAGTTCCCTGGCCTAGTTCTTCAAAGTTATCAATGGTTGAGTTTTTCTTTTGATCCCTAGCAAGGTGACATTGGGATCCTATGATGTTTCACTCTGTTTTTAAGTAATAC 2248 0.4942 MKTVEPDTLSLGHGNSPLSVTLEGSDFVANGHPFLSEVPGNIIATPLPSLYSKPNDSVVGCFVGFDADEPRSRHVAALGKLKGIRFMSIFRFKVWWTTHWVGTNGHQVEHETQMILLDKNDSLGRPYLLLLPILQGSFRASLQPGFHDYVDLCLESGSTRVAASSFRSCLYVHVSHDPYGLLREATKVLSMHLGTFKLLDQKTPPAIIDKFGWCTWDAFYLKVHPTGVWEGVKGLTEGGCPPGMVLIDDGWQSICHDEDPITDREGVNRTSAGEQMPCRLVKFEENYKFRDYCSMKGPEKGMGAFVRDLKERFKSVEQVYVWHALCGYWGGVRPKVPGMPEAKVVTPKLSKGLKMTMEDLALDKIVNNGVGLVPPHLAHHLYEGLHSRLESAGIDGVKVDVIHLLEMVSEEYGGRVELAKAYYKALTASVKKHFKGNGEMIFGALIHLEIQRARIGSKVVTWCTVPTTACGWEILFTQIGTCSSPLTLVLNSMPLLGPSLVDPFTLAIVLESTTSSCSRASLCLMAPSCVYTGVLGLFNCQGGGWCPVTRRNKSASEFSHSVTCLASPQDIEWSNGKNPICVKGTDVVAVYLFKDSKLKVMKASEHLEVSLEPFSFELLTVSPVIVLLNSLIQFAPIGLVNMLNSGGAIQSMEFEDLTTVTGVVKIGIRGCGEMRVFASEKPINCKIDGVAVKFDYEDKLVRVQVPWPSSSKLSMVEFFF 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00589 720 Pfam Raffinose synthase or seed imbibition protein Sip1 531 703 IPR008811 -
Pste2g00589 720 Pfam Raffinose synthase or seed imbibition protein Sip1 23 438 IPR008811 -
Pste2g00589 720 SUPERFAMILY (Trans)glycosidases 205 488 IPR017853 -
Pste2g00589 720 PANTHER - 23 438 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00589 Pste-Chr2 5622398 5628913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00589 531 720 Glycoside Hydrolase AT5G40390 48.421 3.05e-54 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00589 2 5622398 5628913 Pste2g00589 2 5622398 5628913 ECH