Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00587 TGCCTCTCCACAGGTCCACTCGGAAGACACTTTATATTAGTGGCAGGTGTACAACCAAGAAAGCAGTTCAGTAACTACTTGCTTCCACAGACTGACACAGACCCAGACCCTCCTCCTTCAACCTTTTCTTCTCCTCTGTTTTCTCAAGCTATGGCTAAGCTTCCTACCATGTTCTCTTTGAGACACTTCTTGGTCCTCTCCCTCGCCTTGAACATCAGCCTCGTACTCAGATTACTCGTGTTCCAAGCCACTCAACAACCCCAAACACAAACAAGAACCAATCCCAACACCCAACACATGCTTATATCATCATCCACCAATTCTACTTCCACAACAGCACCCAAGAATAGAGTCATCAACCTTGACCATGGAGACCCGACAGTGTATGAGAGATATTGGCGACAAACGGGTGACAAGAGCACGATCATAATCCCGGGATGGCAGTCTATGAGTTATTTTTCTGATGTGACCAACATTTGCTGGTTTTTGGAGGCAGAGTTTAAGAGGGAAGTGGTGAGGCTGCACAAAGTGGTGGGAAATGCAGTCACAGAAGGGCGTCACATTGTTGTGGGAACAGGTTCCTCTCAGCTCTTTCTGGCTGCTCTTTATGCTCTCTCCCCAACTGATGCAACTGAACCAATCAGTGTCGTATGTGCCTCACCCTACTACTCGTCCTACCCATCAATGACGGATCACTTGAAATCAGGGCTTTACAAATGGGCAGGTGATGCAGAAAGTTTTGAGAAAGAGGGTCCCTACATTGAGCTGGTTACTTCTCCCAATAATCCAGATGGGCATGTAAGAAGATCTAAGGTCAACAGAAGTCAGGGATTTTTGGTCCATGACCTTGCCTATTACTGGCCTCAGTACACTCCAATATCAGCACCTGCAGATCATGATCTGACGCTTTTCACTGTCTCAAAAAGCACTGGCCATGCAGGGATGCGCATAGGGTGGGCACTTGTGAAAGACCCAGAGATAGCTAAGAGAATGACTAAATTCATAGAGCTGAATACAATTGGAGTGTCTAAGGATTCGCAGCTCAGGGCTGCTAAGGTTTTAAGGGCAGTCTCTGATAGCTGGGAACAAGGTAACTCGCAAGAGGGTGACTCATTCTTCAAGTTCAGCCACAAACTAATGGCCAATAGGTGGAAACAACTGAGACTAGTAGTAGAGCGTAGCGGATTGTTCAGTTTGCCCAAGTTTTCTCCATCATTCTGCACCTTTTTCAATCAGGTCTTGGAGCCTCAACCAGCTTTTGTGTGGTTAAAGTGTGAGGGAAACGTGGAAGACTGCGAAAGCTTCCTTCGAAGACACAACATATTAACAAGAAGTGGAACACATTTTGGTGTTAGTCCAAAATATGTAAGAATTAGCATGTTGGATACTGACGATAATTTTAATCAGTTTCTCGATAGACTTTCTTCCATAAGGGAGAGTTAGTGGCTGGTTAATGTATGTATAATAATTAGAAGCGTTAGTTTTCTGTACGCTGAAAAGTGAAACACAGAAATGCAATTTTGCTCATCCCTGTATAATTAGATATATGGGTCTGAGATCATCCTTTAATGAAATCCAG 1579 0.4452 CLSTGPLGRHFILVAGVQPRKQFSNYLLPQTDTDPDPPPSTFSSPLFSQAMAKLPTMFSLRHFLVLSLALNISLVLRLLVFQATQQPQTQTRTNPNTQHMLISSSTNSTSTTAPKNRVINLDHGDPTVYERYWRQTGDKSTIIIPGWQSMSYFSDVTNICWFLEAEFKREVVRLHKVVGNAVTEGRHIVVGTGSSQLFLAALYALSPTDATEPISVVCASPYYSSYPSMTDHLKSGLYKWAGDAESFEKEGPYIELVTSPNNPDGHVRRSKVNRSQGFLVHDLAYYWPQYTPISAPADHDLTLFTVSKSTGHAGMRIGWALVKDPEIAKRMTKFIELNTIGVSKDSQLRAAKVLRAVSDSWEQGNSQEGDSFFKFSHKLMANRWKQLRLVVERSGLFSLPKFSPSFCTFFNQVLEPQPAFVWLKCEGNVEDCESFLRRHNILTRSGTHFGVSPKYVRISMLDTDDNFNQFLDRLSSIRES 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00587 480 Gene3D Aspartate Aminotransferase, domain 1 363 480 IPR015422 GO:0003824
Pste2g00587 480 SUPERFAMILY PLP-dependent transferases 114 476 IPR015424 -
Pste2g00587 480 Gene3D - 163 362 IPR015421 GO:0003824
Pste2g00587 480 CDD AAT_like 166 474 - -
Pste2g00587 480 MobiDBLite consensus disorder prediction 86 117 - -
Pste2g00587 480 Pfam Allinase 119 477 IPR006948 GO:0016846
Pste2g00587 480 Gene3D - 89 159 IPR037029 GO:0016846
Pste2g00587 480 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 105 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00587 Pste-Chr2 5599713 5608000 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00587 2 5599713 5608000 Pste2g00587 2 5599713 5608000 ECH
Pste6g02070 6 9728144 9735608 Pste2g00587 2 5599713 5608000 PCT