Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00498 ATGAAGATAATGATTCGGAGGTGCTCTTTCCCCCCTCTTAAATGTCTAGATCTGCTTATGCATGCAAAGTTTGTAACTGATAATAAAATTCCTGCCGTATCCACTTGGTTGATTAATGTTATTGAGCTGTCAGCTAGATTTGTTTTTCCCAAGTCAGAAGAAGAAAGATTGAAAGATCAAAGAGAGAAGGAGGAATTAGAGCAGCATATGAGAGAAAGAGATGCAGCAGGGACACGGAAGTTGACTGAGCAAAAATTAACTCGAAAGGAGGAAGAAGAGGCAATTCGTAGATCTAATGCTGCAGAGCAGGATGACATTAAAACTTTGAGAAAGTTTTCAAGGCAAGAATACTTGAAGAAAAGGGAGGAAAAGAAATTAGAAGAACTGAGGTACAAGAAAGAGATATATGAACTTGTGAAGAAGCGGTCAGAGGAGGCTGACAGTGCGAATGAGTATAGAATGCCAGAAGCTTATGATCAGGAAGGTGGTGTTAATCAAGAGAGGAGATTTTCTGTGGCTATGCAGCGTTACAGGGATCCAAATGCTGAAGAGAAGATGAATCCATTTGCTGAACAAGAGGCTTGGGAGGAACATCAAATTGGAAAGGCAACAATGAAGTTTGGTTCAAAAAATAAAAAACAAGTCTCTGATGATTATCAGTTTGTTTTTGAGGACCAGATTGATTTTATCAAGGCATCAGTAATGGAGGGAGATAAGTTTGATTATGAAGAGATGAAAGATTCACATGAAAAGTCCCAAGCGAAGTCAGCCTTTGAGGCACTTCAGGAAGAGAGGAAAAGATTACCCATGTACCCTTATCGGGATGAATTACTCAAAGCTGTTCATGATCACCAGGCATGGTCCCTCCCTCTATTCCTTTCTGTTTTTTCCCATATTTTTGTACTTGTAATTGTTGGAGAAACTGGCTCTGGAAAGACAACACAGATCCCCCAATATCTTCATGAAGCTGGCTACACAAAGCGTGGAATGATTGCATGCACTCAGCCGCGTCGTGTTGCAGCTATGAGTGTTGCTGCTCGAGTTTCTCAAGAAATGGGTGTTAAATTAGGACATGAGGTTGGTTACTCCATCCGTTTTGAAGATTGTACGTCAGAGAAGACTATTCTGAAATATATGACAGATGGAATGTTACTGAGGGAATTTCTTGGTGAACCTGATCTGGCAAGTTATAGTGTTGTGATGGTGGATGAGGCTCATGAAAGAACACTCTCAACTGATATCCTGTTTGGATTAGTAAAGGATATTGCTCGTTTCCGGCCTGATCTCAAGTTGCTGATATCAAGTGCCACACTTGACGCAGAGAAATTCAGTGATTACTTTGATTCTGCACCAATATTCAAAATTCCAGGGAGACGATATCCTGTTGAAATAAACTATACCAAAGCACCAGAAGCTGACTACTTAGATGCAGCTATTGTCACCTCACTTCAAATTCATGTCACTCAACCACCTGGAGATATATTGGTGTTCCTTACTGGTCAAGAAGAAATTGAAACGGCAGAAGAAATCTTGAAGCATCGAACTAGAGGCTTGGGCACCAAAATTGCCGAGTTAATAATATGCCCTATTTATGCCAACCTTCCAACTGAACTACAAGCAAAAATATTTGAACCCACTCCTGAAGGGGCACGAAAGGTTGTCCTTGCTACTAATATTGCAGAAACATCATTGACAATTGATGGGATCAAGTATGTCATTGATCCTGGATTTTGTAAGATGAAAAGTTATAATCCAAGAACAGGTATGGAATCTCTGCTAGTAACTCCCATCTCAAAAGCTTCAGCGAATCAAAGAGCTGGACGTTCTGGAAGAACAGGTCCTGGAAAATGCTTCCGATTGTATACTGCATACAATTTTCAAAATGATTTGGAGGATAACACTGTACCCGAAATACAGCGGACTAACCTTGCAAATGTAGTTTTGACATTAAAAAGTCTTGGTATTCATGACTTATTGAACTTTGATTTTATGGATCCTCCGCCTGCTGAGGCCTTATTGAAAGCTTTGGAGCTTCTATTTGCTTTAAGTGCGTTGAATAAGCTTGGTGAGTTGACTAAGGTTGGTCGACGGATGGCAGAGTTCCCACTTGATCCTATGTTGTCAAAAATGATAGTGGCTTCAGAAAATTATAAGTGTTCAGATGAGATAATTTCTATTGCCGCTATGCTTTCTGTTGGAAACTCAATATTTTACCGGCCAAAGGATAAACAAGTACATGCAGACAATGCAAGGATGAATTTTCACACTGGAAATGTTGGAGACCATATTGCATTGCTAAAGGTAAGGAGTATGAAACGGGCAAGGGATATCCGTGATCAACTTGCAGGACTTTTAGAGAGGGTTGAGATTGAATTAACTGCAAATTCTAATGACTTAGATGCCATCAAGAAATCCATTACATCTGGCTTCTTCCCACACTCTGCACGTCTGCAAAAGAATGGATCATATCGGACTGTTAAACATCCTCAGACAGTTCACATACATCCTAGTGGGGGACTGGCACAGGTTCTTCCTAGATGGGTTGTATACCATGAACTAGTACTCACAACAAAGGAATATATGAGACAGGTGACGGAGTTGAAGCCAGACTGGTTGGTGGAGATAGCCCCTCACTATTACCAGCTTAAGGATGTTGAAGACTCTCCTCCATTTGCACCATCTCTGGACAAGGCTCTGCGATGTGCATGTTGCCGTTGTCAGAGAGCCACTGTCATCACATTTGCTGCTGCTGATCTACTGGCTACGAATTCAAAAGCCTTCCAAGCTTTGTTGATTGATCCTAGGAGTGTAGCAACACAATCAAATGGAAATCTTGAAGCCAACATTGATGACAACAATCAAGGAAATCCTGGTAGAAATGGTTTTGGTGGAGTTATTCGTTATACAAAATCTAATTGGGTTGCAAGATTCTCTGGATTTGTGTGGGTTCTCCTCTAG 2958 0.408 MKIMIRRCSFPPLKCLDLLMHAKFVTDNKIPAVSTWLINVIELSARFVFPKSEEERLKDQREKEELEQHMRERDAAGTRKLTEQKLTRKEEEEAIRRSNAAEQDDIKTLRKFSRQEYLKKREEKKLEELRYKKEIYELVKKRSEEADSANEYRMPEAYDQEGGVNQERRFSVAMQRYRDPNAEEKMNPFAEQEAWEEHQIGKATMKFGSKNKKQVSDDYQFVFEDQIDFIKASVMEGDKFDYEEMKDSHEKSQAKSAFEALQEERKRLPMYPYRDELLKAVHDHQAWSLPLFLSVFSHIFVLVIVGETGSGKTTQIPQYLHEAGYTKRGMIACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREFLGEPDLASYSVVMVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINYTKAPEADYLDAAIVTSLQIHVTQPPGDILVFLTGQEEIETAEEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVIDPGFCKMKSYNPRTGMESLLVTPISKASANQRAGRSGRTGPGKCFRLYTAYNFQNDLEDNTVPEIQRTNLANVVLTLKSLGIHDLLNFDFMDPPPAEALLKALELLFALSALNKLGELTKVGRRMAEFPLDPMLSKMIVASENYKCSDEIISIAAMLSVGNSIFYRPKDKQVHADNARMNFHTGNVGDHIALLKVRSMKRARDIRDQLAGLLERVEIELTANSNDLDAIKKSITSGFFPHSARLQKNGSYRTVKHPQTVHIHPSGGLAQVLPRWVVYHELVLTTKEYMRQVTELKPDWLVEIAPHYYQLKDVEDSPPFAPSLDKALRCACCRCQRATVITFAAADLLATNSKAFQALLIDPRSVATQSNGNLEANIDDNNQGNPGRNGFGGVIRYTKSNWVARFSGFVWVLL 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00498 985 SMART ha2_5 674 766 IPR007502 GO:0004386
Pste2g00498 985 SMART ultradead3 266 465 IPR014001 -
Pste2g00498 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 273 784 IPR027417 -
Pste2g00498 985 Pfam Helicase conserved C-terminal domain 486 613 IPR001650 -
Pste2g00498 985 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 398 407 IPR002464 -
Pste2g00498 985 Gene3D - 224 458 IPR027417 -
Pste2g00498 985 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 225 458 - -
Pste2g00498 985 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 459 634 - -
Pste2g00498 985 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 479 654 IPR001650 -
Pste2g00498 985 PANTHER ATP-DEPENDENT RNA HELICASE 210 879 - -
Pste2g00498 985 MobiDBLite consensus disorder prediction 58 99 - -
Pste2g00498 985 FunFam Pre-mRNA-splicing factor ATP-dependent RNA helicase 658 760 - -
Pste2g00498 985 Coils Coil 119 139 - -
Pste2g00498 985 SMART helicmild6 505 613 IPR001650 -
Pste2g00498 985 Coils Coil 771 791 - -
Pste2g00498 985 Gene3D - 459 634 IPR027417 -
Pste2g00498 985 CDD SF2_C_RHA 460 621 - -
Pste2g00498 985 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 293 456 IPR014001 -
Pste2g00498 985 Pfam Helicase associated domain (HA2) 675 749 IPR007502 GO:0004386
Pste2g00498 985 Gene3D - 658 795 - -
Pste2g00498 985 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 802 879 IPR011709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00498 Pste-Chr2 4580294 4604505 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00498 2 4580294 4604505 Pste2g00498 2 4580294 4604505 ECH