Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00489 TTATACGTTTCAAAGTAAAGTCGCAAACGTTCCAGAAATCTCTTCTTTCGGTTAAATAAATTCACCACCTCTTAGTTCTTTCTCACTTCAATTGCAAACAAAAGCACACTGCATACTCATCAAACGTTTACTCTTCTCAAAGCGTCAATTTCAACCTAATCCAATTCTCTCATTCGATCACTTTTTCTTCAATTCCAAAAACCTCTCATCTCTCGCGTGATAAGGTAAAACCATGAATCCTGATACGTTCACTCACAAGACAAACGAAGTTCTGGTGAGCGCTCACGAAATTGCAGTGAGCAACGGCCACGCGCAGTTAACGCCTCTCCACCTCGCGTCCTCCTTAGTCTCAGACAAGGGCGGCATTTTCGCCCAGGCGCTTTGCAACGCGGCGGGGGACGAGTCCGCACGCTCGGCGGAGCGCGTGATCGAGCAGGCGCTGAAGAAGCTGCCCTCTCAGTCCCCTCCGCCGGACTCCGTTCCCGCGAGCACCGCCCTCATCAAGGTCATCCGCAGAGCGCAGTCGCTCCAGAAGACGCGCGGCGACACGCACCTCGCTGTCGATCAACTCGTCCTCGGACTCCTCGAGGATTCTCAGGTTGTGGAGATTCTCAAAGAAGCCGGCGTGGCGGCTTCGAAGGTGAAAGGTGAAGTTGAGAAGCTTCGCGGCAAGCAAGGGAAGAAAGTTGAAAGTGCCACCGGGGACACAACCTTTCAGGCTCTGAAAACATATGGAAGAGATCTTGTGGAACAAGCAGGGAAACTCGACCCTGTTATTGGAAGGGATGAGGAAATTCGAAGGGTTGTGAGGATTTTAAGTCGAAGGACAAAGAATAACCCCGTTTTGATTGGTGAACCAGGTGTCGGAAAAACTGCAGTGGTTGAAGGGTTGGCACAGAGGATTGTTAAAGGAGATGTTCCTAGTAACCTTTCTGATGTGAGGCTCATTGCATTAGACATGGGTGCACTGGTAGCGGGTGCAAAATACAGAGGGGAGTTTGAGGAGAGATTGAAGGCGGTTTTGAAGGAGGTGGAAGAGGCTGAGGGGAAGGTTATTTTGTTCATTGACGAGATTCATTTGGTTCTCGGTGCTGGGAAAGCTGAGGGTTCCATGGATGCTGCTAATTTATTTAAGCCTATGCTCGCAAGGGGTCAGTTGAGGTGCATTGGCGCCACTACCCTAGAGGAGTATAGGAAGTATGTGGAGAAGGATGCAGCCTTTGAGAGAAGGTTTCAACAGGTGTATGTGGCAGAACCGAGTGTTGTTGACACTGTTAGTATACTTCGTGGGTTGAAGGAGAGATATGAAGGTCACCACGGGGTGAGGATTCTGGATCGTGCTTTGGTTGTAGCAGCTCAGTTGTCTAGTCGCTACATTACCGGTCGTCATCTTCCGGACAAAGCTATTGATTTAGTTGATGAGGCTTGTGCGAATGTGAGAGTTCAACTTGACAGTCAGCCGGAGGAAATTGACAACCTTGAAAGAAAGAGAATGCAACTAGAAGTGGAACTCCATGCTCTGGAAAAAGAGAAGGACAAAGCTAGTAAAGCTCGATTGGTAGAAGTGCGGAAAGAGCTTGATGACTTGAGGGACAGGTTGCAACCTTTGATGATGAAGTATAGAAAGGAGAAAGAGAGGGTTGATGAGATTCGACGACTAAAGCAGAAAAGGGAAGAGCTGAACTTTGCTTTACAAGAGGCTGAGCGGCGATATGATCTTGCCAGAGCTGCAGACTTGAGGTATGGGGCAATTCAGGAGGTGGAATCTGCAATACAACAGCTTGAAGGGAACACTGAGGGGAACGAAATGTTGACGGAAACTGTTGGACCTGAACACATAGCCGAGGTTGTGAGCCGCTGGACTGGCATACCAGTGACAAGGCTTGGCCAAAATGATAAAGAGAGGTTGATTGGTCTTGCTGACAGATTGCACAAGAGGGTTGTGGGGCAAGACCAAGCAGTTACTGCTGTTGCTGAGGCTGTGCTGAGATCAAGAGCTGGACTTGGGAGGCCTCAACAACCAACTGGCTCCTTCCTGTTCTTGGGTCCAACTGGTGTTGGCAAGACTGAGCTTGCAAAGGCCCTTGCTGAGCAACTCTTTGATGATGAAAATCAGTTGGTGAGAATTGACATGTCTGAATACATGGAGCAACATTCCGTTTCACGGTTGATTGGCGCTCCGCCTGGGTATGTTGGACACGAAGAAGGAGGTCAGCTAACTGAAGCTGTAAGGCGAAGGCCTTACAGTGTAGTACTCTTTGATGAAGTGGAGAAGGCACATTTATCTGTGTTTAACACACTCCTTCAGGTCTTGGATGATGGAAGGTTAACGGATGGCCAAGGCCGCACTGTGGACTTTAGAAACACTGTCATCATCATGACCTCTAATCTTGGAGCTGAGCATCTCCTCAGTGGCCTCTCAGGAAAATCTTCTATGCAAGTAGCTCGTGATAGAGTAATGCAAGAGGTGAAAAGACATTTTAGGCCAGAATTGTTGAACAGACTTGATGAAATTGTCGTATTTGATCCTCTTTTGCATGAGCAACTAAGAAAAGTTGCAAGGTTACAAATGAAGGATGTTGCTAAGCGTCTTGCTGAGAGGGGAATTGCATTAGCAGTGACTGATGCAGCACTTGATTATATCCTTAGTGAGAGCTATGATCCGGTTTATGGAGCCAGACCAATTCGGAGGTGGCTTGAGAGGAAGGTTGTGACAGAGCTTTCTAGAATGCTTGTGAAGGAAGAAATTGATGAGAACTCAACAGTTTACATTGATGCTGGAGCTGAAGGGAGTGAGCTAGTTTACAGGGTAGAAAAAAATGGAGGGATTGTTAATGCTGAAACTGGTCAGAAGTCTGATATTTTGATTCAGTTGCCTAATGGAGTACTAAGATCTGATGCTGCCCAGGCAGTAAAGAAGATGAAGATTGAGCAAATGGATGAAGATGAAGATGGTGATATGGAAGAATGAGTGCAAATGATCAAGAGTGGTTCAGATTAATGTTTTTGTCCTTTTTCTTTATGAATGGGGCGATTGGAGGATGAACGTGTCCCATGTAATGTGGTTTTTATTTTGTTATTGAGTGTTATTAATGTAAATAAGTTAAGTTGGTTATAAAGAGTGAGATCAGAGCCTTTGCCTTTTGAAAGTGCTGAAGTGAAGGTTTTTTTATTTATATGTTCAAAGGTGAATCAAATGTAAAGCTAAGACATTTTGAGGAATAAAGATACTTTAAATATGTGTGCCAACGC 3252 0.4616 MNPDTFTHKTNEVLVSAHEIAVSNGHAQLTPLHLASSLVSDKGGIFAQALCNAAGDESARSAERVIEQALKKLPSQSPPPDSVPASTALIKVIRRAQSLQKTRGDTHLAVDQLVLGLLEDSQVVEILKEAGVAASKVKGEVEKLRGKQGKKVESATGDTTFQALKTYGRDLVEQAGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPSNLSDVRLIALDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGKAEGSMDAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVVDTVSILRGLKERYEGHHGVRILDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVELHALEKEKDKASKARLVEVRKELDDLRDRLQPLMMKYRKEKERVDEIRRLKQKREELNFALQEAERRYDLARAADLRYGAIQEVESAIQQLEGNTEGNEMLTETVGPEHIAEVVSRWTGIPVTRLGQNDKERLIGLADRLHKRVVGQDQAVTAVAEAVLRSRAGLGRPQQPTGSFLFLGPTGVGKTELAKALAEQLFDDENQLVRIDMSEYMEQHSVSRLIGAPPGYVGHEEGGQLTEAVRRRPYSVVLFDEVEKAHLSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGAEHLLSGLSGKSSMQVARDRVMQEVKRHFRPELLNRLDEIVVFDPLLHEQLRKVARLQMKDVAKRLAERGIALAVTDAALDYILSESYDPVYGARPIRRWLERKVVTELSRMLVKEEIDENSTVYIDAGAEGSELVYRVEKNGGIVNAETGQKSDILIQLPNGVLRSDAAQAVKKMKIEQMDEDEDGDMEE 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00489 912 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 708 722 IPR001270 GO:0005524
Pste2g00489 912 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 675 693 IPR001270 GO:0005524
Pste2g00489 912 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 601 619 IPR001270 GO:0005524
Pste2g00489 912 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 646 664 IPR001270 GO:0005524
Pste2g00489 912 ProSitePatterns Chaperonins clpA/B signature 1. 295 307 IPR018368 GO:0005524
Pste2g00489 912 SMART AAA_5 597 768 IPR003593 GO:0016887
Pste2g00489 912 SMART AAA_5 199 344 IPR003593 GO:0016887
Pste2g00489 912 CDD RecA-like_ClpB_Hsp104-like 558 764 - -
Pste2g00489 912 Gene3D - 150 343 IPR027417 -
Pste2g00489 912 FunFam ATP-dependent Clp protease subunit 550 765 - -
Pste2g00489 912 Pfam Clp amino terminal domain, pathogenicity island component 96 146 IPR004176 -
Pste2g00489 912 Pfam Clp amino terminal domain, pathogenicity island component 17 57 IPR004176 -
Pste2g00489 912 Coils Coil 253 273 - -
Pste2g00489 912 Pfam C-terminal, D2-small domain, of ClpB protein 767 847 IPR019489 -
Pste2g00489 912 FunFam ATP-dependent chaperone ClpB 1 148 - -
Pste2g00489 912 ProSiteProfiles Sigma-54 interaction domain profile. 570 809 IPR002078 GO:0005524|GO:0006355|GO:0008134
Pste2g00489 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 545 IPR027417 -
Pste2g00489 912 ProSitePatterns Chaperonins clpA/B signature 2. 631 649 IPR028299 -
Pste2g00489 912 Coils Coil 469 500 - -
Pste2g00489 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 848 IPR027417 -
Pste2g00489 912 Coils Coil 406 440 - -
Pste2g00489 912 SMART ClpB_D2_small_2 767 858 IPR019489 -
Pste2g00489 912 Pfam ATPase family associated with various cellular activities (AAA) 204 317 IPR003959 GO:0005524|GO:0016887
Pste2g00489 912 Gene3D - 767 866 - -
Pste2g00489 912 Gene3D - 550 766 IPR027417 -
Pste2g00489 912 PANTHER ATP-DEPENDENT CLP PROTEASE 7 864 - -
Pste2g00489 912 Gene3D - 344 544 IPR027417 -
Pste2g00489 912 Pfam AAA lid domain 344 443 IPR041546 -
Pste2g00489 912 ProSiteProfiles Clp repeat (R) domain profile. 3 147 IPR004176 -
Pste2g00489 912 Gene3D - 3 149 IPR036628 -
Pste2g00489 912 FunFam ATP-dependent chaperone ClpB 344 544 - -
Pste2g00489 912 Pfam AAA domain (Cdc48 subfamily) 597 761 IPR003959 GO:0005524|GO:0016887
Pste2g00489 912 CDD AAA 182 337 - -
Pste2g00489 912 FunFam Chaperone clpB 1, putative 152 343 - -
Pste2g00489 912 SUPERFAMILY Double Clp-N motif 4 156 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00489 Pste-Chr2 4503434 4508797 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00489 2 4503434 4508797 Pste2g00489 2 4503434 4508797 ECH