Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00484 CAAGACATGGCGGAGAAGTTGGGAGTGGTAGCTGCTGTTGAAGACACTTCAAACTCAAAGCCTCTTCCCCAAACGACAACGAAACTCGTCGTTTTGGCTGACCTCAACGTCGATCCACCTGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAAATGATGATTCTTCGCTTCCTCCTCCTCCTCCAATTGCCACTCAAGATAAGAGTTTGTTGTCCAAAGAAACTGATAGCGTTGAAGGTGAAAGTAAAAAGTTGAACAAACTGAGCAAATGCCGCTCCAGACTTAGCAAGACTGATTCTTCTCTTGATTGTGGAGCTGATGTGGAAGGTGACCAGCATGTTCAAGGGCCTCCTTCATCTCGGGAGGAAAAAGTCAGCAGTGTGAAGACTGGCTTGGTTCATGTTGCAAGGAAGATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAACCAACCTCAGAAGGCTGTGTTGGCCTATGAGAAGGCAGAAGAGATCCTTCTCAGGCCTGAGGCTGAGATTGACAGACCAGAGTTGCTTTCTTTGGTTCAGATTCACCATGCACAGTGCCTGATACTAGAAAGTTCATCAGAAAGCAGTTCAGATAAAGAACTTGAACCTCGTGAACTTGAAGAGATTCTTTCTAAGCTGAAAGAGTCAGTGCATTCTGATATCAGACAGACAGCTGTATGGAACACACTGGTTTTGTCATCATTGTTGTCCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTCAAATTGGGAATTTGGAGTTATCTGCAAAATGTTTACAAGAATTGATTTTAAAAGATCAAAATCATCCTGCAGCTTTGATCAATTATGCTTCCCTTCTTTTGTGTAAATATGCTTCAGTTATAGCAGGTCCTGGTGCTAGTGCTGCTGAAGGTGCCACAGCTGATCAGATCATGGCTGCTAATGTTGCTAAGGATTGTTTATTAGCTGCAATTAAAGCAGATAGCAAATCAGCTCATGTCTGGGCAAATCTTGCCTATGCATTTTCTATTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCAGCCAAACTGGAACCCAATTGCATGTCCACCCGATATGCTGTTGCTATCCATCGGATAAAGGAGGCAGAAAGATCTCAAGATCCTAGTGAACCACTTTCATGTGCTGGAAATGAGATGGCCTCTATAATAAGAGATGGTGATTCATCCGTGGTTGAAATTCCAATAGCATGGGCTGGGCTTGGCATGGTTCACAAGGCTCAGCATGAGATAGCTGCAGGATATGAAAGTGAACAGCATGGGCTGAGAGAAGTTGAAGAGCGTGCTGTTTGCAGTTTAAAGCAGGCTATAGCAGAAGATCCAAACGATGCTGTGCAGTGGCACCAACTTGGTGTTCATTGTCTCTCTGCTCGGCAATTCAAAACTTCACAAAAGTACCTCAAAGCTGCTGTTGCCTGTAACAAGGATTGCATCTATTCATGGTCTAACCTAGGTGTCTCACTTCAACTATCAGAAGAACCATCACAAGCTGAAGAAGTATACAAGCAAGCATTGTCTTTGGCAACAACTCAACAAGCGCATGCTATATTATCCAACTTGGGAATTCTCTATCGCCATCAGAAACAATATCAACGTGCAAAGGCTATGTTTACAAAGTCACTTGAACTACAGCCTGGCTATGCTCCTGCATTTAACAATCTAGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAGGCCAAGTATTGTTTTGACAAAGCCCTCGAATCAGACCCATTGCTAGATGCAGCTAAGTCTAATTTGATTAAGGTGGCTGCCATGTCCAAGTTATGCAAAGGTCTCTCCTCTTACGCCGTTAAAGAATGACATTGTAGTCCCTCAAGGATAGGTGTTTTTTTCTTCTGTTGTACATCCAATTCCATTGATAGAAATGGATAAAAGAGGAATGTACTATAATTACTACTTTGAAAATGAGCAATTATATAGATTTTTTTTTTCAAGTTCATTTTCTTCAAGCTGTATTAAATGGGTCACTCAATACCAGAAACTTTTGTAGCATGTAAAGGAACCCCGGTCAGTGTTAACGGGATGGAACCAACTAATTGTATAACACACGAAAGCCAAAGTGAGTCTGGTTAAACATCTGGATTGCTTTATCAGTTGACTATTAAGACACTAAGAATGGATGTACTTGGTTTTGATATGAAAAGAACTAGGTGGTTGACCTAATTGAGTTTTTTTTTAAAATAATTACTTAGATGAATCTGTTTTAAAAATATTTATCAATGTGTGTTTGTTTTCAAGTTTAACTTGTTCAAATCACAATTTTTACTTGCATTTTTAGTGTTTTGATTAGTTGATTATCACCAACTTGAAAGTCATATAGTCATACAATTGATGTGATACTAAAAATATAATTGG 2463 0.4072 MAEKLGVVAAVEDTSNSKPLPQTTTKLVVLADLNVDPPEAEAEAEAEAENDDSSLPPPPPIATQDKSLLSKETDSVEGESKKLNKLSKCRSRLSKTDSSLDCGADVEGDQHVQGPPSSREEKVSSVKTGLVHVARKMPKNAHAHFILGLMYQRLNQPQKAVLAYEKAEEILLRPEAEIDRPELLSLVQIHHAQCLILESSSESSSDKELEPRELEEILSKLKESVHSDIRQTAVWNTLVLSSLLSIAPENYDCLGNLGIAYLQIGNLELSAKCLQELILKDQNHPAALINYASLLLCKYASVIAGPGASAAEGATADQIMAANVAKDCLLAAIKADSKSAHVWANLAYAFSISGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDPSEPLSCAGNEMASIIRDGDSSVVEIPIAWAGLGMVHKAQHEIAAGYESEQHGLREVEERAVCSLKQAIAEDPNDAVQWHQLGVHCLSARQFKTSQKYLKAAVACNKDCIYSWSNLGVSLQLSEEPSQAEEVYKQALSLATTQQAHAILSNLGILYRHQKQYQRAKAMFTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFDKALESDPLLDAAKSNLIKVAAMSKLCKGLSSYAVKE 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00484 633 Gene3D Tetratricopeptide repeat domain 451 536 IPR011990 GO:0005515
Pste2g00484 633 Pfam Tetratricopeptide repeat 539 601 - -
Pste2g00484 633 Gene3D Tetratricopeptide repeat domain 132 237 IPR011990 GO:0005515
Pste2g00484 633 Gene3D Tetratricopeptide repeat domain 537 627 IPR011990 GO:0005515
Pste2g00484 633 Gene3D Tetratricopeptide repeat domain 313 408 IPR011990 GO:0005515
Pste2g00484 633 SUPERFAMILY TPR-like 452 604 IPR011990 GO:0005515
Pste2g00484 633 SMART tpr_5 539 572 IPR019734 GO:0005515
Pste2g00484 633 SMART tpr_5 469 502 IPR019734 GO:0005515
Pste2g00484 633 SMART tpr_5 141 174 IPR019734 GO:0005515
Pste2g00484 633 SMART tpr_5 503 536 IPR019734 GO:0005515
Pste2g00484 633 SMART tpr_5 340 373 IPR019734 GO:0005515
Pste2g00484 633 SMART tpr_5 251 284 IPR019734 GO:0005515
Pste2g00484 633 SMART tpr_5 573 606 IPR019734 GO:0005515
Pste2g00484 633 Pfam Tetratricopeptide repeat 340 373 IPR019734 GO:0005515
Pste2g00484 633 Pfam Tetratricopeptide repeat 141 170 IPR019734 GO:0005515
Pste2g00484 633 MobiDBLite consensus disorder prediction 15 29 - -
Pste2g00484 633 SUPERFAMILY TPR-like 135 296 IPR011990 GO:0005515
Pste2g00484 633 ProSiteProfiles TPR repeat profile. 539 572 IPR019734 GO:0005515
Pste2g00484 633 Gene3D Tetratricopeptide repeat domain 238 299 IPR011990 GO:0005515
Pste2g00484 633 ProSiteProfiles TPR repeat profile. 573 606 IPR019734 GO:0005515
Pste2g00484 633 ProSiteProfiles TPR repeat profile. 340 373 IPR019734 GO:0005515
Pste2g00484 633 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 18 628 - -
Pste2g00484 633 MobiDBLite consensus disorder prediction 1 124 - -
Pste2g00484 633 SUPERFAMILY TPR-like 325 383 IPR011990 GO:0005515
Pste2g00484 633 MobiDBLite consensus disorder prediction 70 95 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00484 419 605 Glycosyltransferase AT3G04240 25.000 2.59e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00484 2 4427682 4434960 Pste2g00484 2 4427682 4434960 ECH