Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00474 GCAAAACCCAAACTACGAAACCGGAAACTCGAGAACTCGAGTAACACTGCGAAGTGCAATAACCTATATATCAGGTCTCCATCGATCATCTTCTACTTCGTTCTTCTTTTGAAGAGCGATTAATTCTGATAGAGTTCAAGGAGATTCAGATTATTGAAAATGTTGATTCAGATTCCTCGCCTCACCAACTCTCTCAGAGAGCCTTTCGATGTGGACGAGTGCTATCTTCATCGCAAAACCGTTCTCCACAACCAAAAACCTCGCAGTTCTGCACGATCGCTTGATGAATCGGAACTGGCGCGGAAGATTGTGCGTGGGTGGGAAGAAGCTTCGGTGGAAGTGCGGCAGGCATACAAGCAGTTTACAGGAGCAGTGACGGAGTTGGTTGACGGAGAAATTCGCTCTGAGGAGTTCCGTGAGGTGGCGCTGTATGTGTACAAGCTATTTGGCAGGCCAATGGAGGAGGAAGGTGACATTGATAGAATTATCTCAGATAAAAAGTTGGAATTACAAAAACTTATTGGACACTCAGTTGCTGATGCCAAGTTGAGGCAAGTTGCATCTCTAGCACAGAGACTTTTAAATTTGCAGCCGAGCAATAGACACTCTACAATTTCTTTTGAAGGAAATTTAGATGCTGATGAGGATTTAGAATTTGGAGCTGATTTGGCCTTTCAAGCACCAGCTCGATTCTTGGTTGATGTATCCTTAGATGATGGAGATATGATGGATTTTGAAAGCACTGTTTTGTTAAAATTTCAGAAAGAACAGTATGGTCATACTGGCCCAACAGATCATTCTATAGTTGATGGGGAAAAGTTCAACTTGACATGGTTAAGAGATGCATGTGATAAAATAGTTAGGAATTGTAATTCACAGCTATCCCGGGATGAATTGGCAATGGCCATTTGTCGGGTTCTTAATTCAGAAAAGCCTGGTGAAGAGATAGCCGGTGATCTGTTGGATCTTGTTGGTGATAGTGCATTTGAAACCGTGCAAAAATTTTTATTGCATCGCAAGGAAATTGTTGGTTCTATTCATCATGGTTTATTGGTATTGAAATCTGATAAAAATGCTTCTCATGCTCAGTCTCGCATGCCTAGTTATGGGACACAGGTGACGGTTCAAACAGAAACAGAAAAGCAAATTGACAAACTTCGACGTAAGGAGGAAAAACGAAATAGACGGGGAATAGAACATGCTGGTGATGGTGACTTCTCTGCACTGGATTTCTCATCTTTACTTCAAGCAAGTGAGAGGAAAAATTTGTTTGATGAGATGATTGGTTCTGGAGATAGGTCTGAGTCAATAGCTGTTACTGCTCTTCCTGAAGGAACTGTAAGGAAGCATTTTAAGGGGTATGAAGAGATTGAGATCAGGGAATTAGATGACTTTGCGCAAGCTGCATTCCGTGGGTACAAATCACTCAATCGTATTCAGAGCAGGATATTTCCTACTGTTTATGGAACTAATGAGAATATTCTAGTGTGTGCTCCTACAGGTGCTGGCAAAACTAACATAGCTATGATTTCAATTCTACATGAGATTGGACAGCACTTTAGGGATGGTTACTTGCATAAAGATGAATTTAAGATAGTTTATGTTGCTCCAATGAAGGCTTTGGCTGCAGAAGTCACATCAACATTCAGCCAGCGTTTATCTCCTTTGAACATGATTGTCAGAGAGCTTACCGGAGATATGCAGCTCTCTAAAAACGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATTACGCGCAAGAGCAGTGACATGTCACTATCAATGCTGGTAAAGCTCTTAATTATTGATGAAGTCCATCTACTCAACGATGATAGAGGTCCTGTGATAGAGGCTCTAGTTGCCAGGACCCTACGGCAGGTGGAATCTACTCAGTCAATGATACGCATTGTGGGCCTTTCTGCCACGCTTCCCAATTACTTGGAGGTTGCACAATTTCTCAGGGTAAATCCAGACACAGGTCTTTTCTTCTTTGATTCTACCTATCGTCCAGTGCCTCTTGCACAACAGTATATTGGAATTAGTGAGCCAAACTTTGCAGCTCGAAATGAGTTGTTGAATGATATTTGCTATACAAAGGTTGCTGATTCTCTTGGGCATGGTCATCAGGCAATGGTGTTTGTTCATTCACGAAAGGACACTGCAAAGACAGCTAATAAACTGGTTGAACTAGCACGAAGGAATGAGGATTTCGAACTTTTTAGTAATAATACACATCCACAATATACCTTTATGAAGGTGGTTAAAGCTGAGATTTATATGCATTTTTCTGATGATATCTGTGTTTCTGAGTTTATAAATTTTCATCTCATGCATTTGGCATTCCAGAAAGAAGTCATTAAATCCAGAAACAAGGATCTTGTTGAACTTTTTGAATATGGTGTTGGTGTACATCATGCTGGGATGCTACGTGCCGATAGAGGACTTACCGAACGACTTTTCTCTGATGGACTTCTGAAGGTTCTTGTATGTACAGCAACTCTAGCATGGGGTGTCAATCTACCTGCACACACAGTTGTCATTAAGGGTACCCAATTATATGATCCAAAAGCTGGTGGGTGGCGAGACCTGGGTATCATAATTACATCTCACGACAAACTAGCATATTATCTTCGATTGCTGACAAGCCAACTCCCTATAGAAAGCCAGTTTATTAGCTCCTTGAAAGATAATTTAAATGCAGAGGTGGCATTGGGTACTGTAACTAATGTTAAAGAAGCCTGTGCATGGCTTGGCTATACATATCTTTTCATAAGGATGAGGATGAATCCTTTAGCATATGGTATTGGGTGGGACGAGGTGATGGCAGATCCTGCTTTGAGTTCTAAGCAAAGATCTCTTGTAATTGATGCTGCACGTGCACTTGATAAAGCAAAAATGATGCGGTTTGATGAGAAAAGTGGCAATTTTTATTGTACTGAGCTGGGTCGCATTGCAAGCCATTTTTACATTCAATATTCCAGTGTTGAAACTTACAATGAAATGTTGAGACGTCACATGAGTGACAGTGAGGTGATTAACATGATTGCACATTCATCTGAATTTGAGAATATTGCTGTTCGAGAAGAAGAACAGAATGAGCTAGAGATGTTGGCTCGGACATGTCCATTAGAAATTAAGGGTGGTCCTTCCAATAAACATGGAAAGATTTCCATTTTGATTCAGTTGTACATATCTCGAGGATCTATAGATTCTTTTTCTTTGGTATCTGATGCTTCATATATAAGTGCAAGCTTGGCTCGAATAACTCGAGCTTTATTTGAGATTTGCTTACGAAGAGGCTGGTGTGAGATGACTCTGTTCATGTTAGAATATTGCAAAGCTGTGGATCGCCAAGTTTGGCCGCATCTACATCCTCTTAGACAATTTGACAAGGACCTTTCCGCAGAAATATTGCGGAAGCTTGAAGAACGTGGGGCTGACTTAGATCGGTTGTATGAGATGGAGGAGAAAGATATTGGGGCATTAATTAGATATGTGCCTGGAGGAAGGTTGGTCAAGCAATACCTAGGGTGTTTTCCATCACTTCAGTTAACAGCAACTGTGAGTCCAATTACCAGAACTGTGTTGAAGGTTGATTTGGTCATTACACCTGTTTTCATTTGGAAAGATCGTTTTCATGGTACTGCTCTACGTTGGTGGATTTTGGTAGAGGATTCTGAGAATGATCACATCTACCATTCGGAACTCTTTACATTGACAAAGCGGATGGCTAGGGGCGAACCTTACAAGCTTTCCTTCACTGTACCTATATTTGAACCTCATCCACCACAATATTATATTCATGCTATTTCCGATTCCTGGCTTCATGCAGAGGCATTCTACACTATTACTTTTCACAATTTACCATTGCCAGAGGCTCGAACGGCTCACACAGAACTCCTGGATTTAAAACCTCTTCCTGTGTCTTCGATTGGCAATAGCACTTATGAGGGATTATATAAATTTTCTCATTTTAATCCTATACAAACTCAGACTTTTCATGTCTTGTATCACACAGACAATAATGTTCTGTTAGGAGCTCCAACTGGAAGTGGAAAGACTATATCTGCTGAGCTTGCTATGCTTCGTCTTTTCAATACCCAGCCTGATATGAAGGTTATTTATATAGCTCCTTTGAAAGCTATTGTTAGGGAAAGAATGAGTGACTGGCAAAAGCGTCTTGTCACTCAGCTAGGAAAAAAGATGGTTGAAATGACAGGAGACTATACTCCAGATTTAATGGCTCTCTTGTCGGCCAATATCATCATATCTACTCCTGAAAAGTGGGATGGAATAAGTCGTAATTGGCATACACGTAGCTACGTCACAAAGGTTGGACTTATGATATTGGATGAGATTCACTTATTGGGAGCTGATCGTGGGCCTATCCTTGAGGTTATTGTTTCTAGAATGAGATACATATCATCCCAAACAGAGCGTGCTGTACGATTTGTTGGCCTTTCTACAGCTCTAGCTAATGCTGGTGATCTAGCTGATTGGTTAGGCGTTGAGGAAATTGGACTCTTCAATTTCAAGCCAAGTGTGAGGCCTGTACCCTTGGAAGGTTATCCCGGAAAGTTTTACTGCCCAAGGATGAATAGCATGAATAAACCGGCATATGCTGCAATATGCACACATTCACCTGCAAAACCAGTTCTTATATTTGTCTCATCACGACGACAGACAAGACTTACTGCACTTGACCTAATTCAGTTTGCTGCTTCAGATGAACAATCAAGACTATTCCTTAATTTGCCAGAAGAAGCTCTGCAGATGGTTTTGTCTCAAGTCTCTGACCTAAACCTGAGGCATACTCTACAGTTTGGCATTGGATTACATCATGCGGGTCTGAATGACAAAGACAGATCTCTGATATTGGTTTGTACCAGCACATTGGCTTGGGGTGTCAATCTTCCAGCACATCTAGTGATTATCAAGGGGACAGAATACTATGATGGAAAAGCGAAGAGGTATGTTGATTTTCCAATCACTGATATATTGCAAATGATGGGTCGTGCTGGACGGCCTCAATTTGATCAACATGGGAAAGCAGTGATTCTTGTTCATGAACCCAAGAAGAGCTTCTATAAAAAGTTCTTGTACGAACCCTTCCCTGTGGAGAGTAGTTTGAGAGAGCGGTTGCATGATCACATTAATGCTGAAATTATTTCTGGAACCATTTGCCATAAACAAGATGCAGTACATTATCTTACATGGACTTACTTATTTCGTAGACTGATGGTTAATCCTGCTTACTATGGATTGGAGAGTGCTGAATCTGAATTTCTAAATTCATATTTGTCTAGCCTAGTGCAGACCACATTTGAGGATTTGGAAGATAGTGGATGCATAAAGATGGATGAGGACAAGGTGGAGCCCATGATGTTGGGTTCAATTGCATCTCAGTATTACCTCAGCTACATGACTGTATCGATGTTTGGTTCTAACATAGGTCCAGATACCTCACTTGAAGTTTTTTTGCATATCCTATCTGCTGCTTCTGAATTTGATGAACTACCTGTGCGTCATAATGAGGTAACTGTTTTTGTTGCTGAAAATATTACTTTTCAAGATAACAAATACAGAAATATGCATGGTCTAATGATCTATATTTTTCTTCTCATCTTAATTTTTTCTGATTTGCATGCAATACATTTTTAA 5679 0.4061 MLIQIPRLTNSLREPFDVDECYLHRKTVLHNQKPRSSARSLDESELARKIVRGWEEASVEVRQAYKQFTGAVTELVDGEIRSEEFREVALYVYKLFGRPMEEEGDIDRIISDKKLELQKLIGHSVADAKLRQVASLAQRLLNLQPSNRHSTISFEGNLDADEDLEFGADLAFQAPARFLVDVSLDDGDMMDFESTVLLKFQKEQYGHTGPTDHSIVDGEKFNLTWLRDACDKIVRNCNSQLSRDELAMAICRVLNSEKPGEEIAGDLLDLVGDSAFETVQKFLLHRKEIVGSIHHGLLVLKSDKNASHAQSRMPSYGTQVTVQTETEKQIDKLRRKEEKRNRRGIEHAGDGDFSALDFSSLLQASERKNLFDEMIGSGDRSESIAVTALPEGTVRKHFKGYEEIEIRELDDFAQAAFRGYKSLNRIQSRIFPTVYGTNENILVCAPTGAGKTNIAMISILHEIGQHFRDGYLHKDEFKIVYVAPMKALAAEVTSTFSQRLSPLNMIVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQSMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSTYRPVPLAQQYIGISEPNFAARNELLNDICYTKVADSLGHGHQAMVFVHSRKDTAKTANKLVELARRNEDFELFSNNTHPQYTFMKVVKAEIYMHFSDDICVSEFINFHLMHLAFQKEVIKSRNKDLVELFEYGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPALSSKQRSLVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMSDSEVINMIAHSSEFENIAVREEEQNELEMLARTCPLEIKGGPSNKHGKISILIQLYISRGSIDSFSLVSDASYISASLARITRALFEICLRRGWCEMTLFMLEYCKAVDRQVWPHLHPLRQFDKDLSAEILRKLEERGADLDRLYEMEEKDIGALIRYVPGGRLVKQYLGCFPSLQLTATVSPITRTVLKVDLVITPVFIWKDRFHGTALRWWILVEDSENDHIYHSELFTLTKRMARGEPYKLSFTVPIFEPHPPQYYIHAISDSWLHAEAFYTITFHNLPLPEARTAHTELLDLKPLPVSSIGNSTYEGLYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTISAELAMLRLFNTQPDMKVIYIAPLKAIVRERMSDWQKRLVTQLGKKMVEMTGDYTPDLMALLSANIIISTPEKWDGISRNWHTRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERAVRFVGLSTALANAGDLADWLGVEEIGLFNFKPSVRPVPLEGYPGKFYCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEQSRLFLNLPEEALQMVLSQVSDLNLRHTLQFGIGLHHAGLNDKDRSLILVCTSTLAWGVNLPAHLVIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLRERLHDHINAEIISGTICHKQDAVHYLTWTYLFRRLMVNPAYYGLESAESEFLNSYLSSLVQTTFEDLEDSGCIKMDEDKVEPMMLGSIASQYYLSYMTVSMFGSNIGPDTSLEVFLHILSAASEFDELPVRHNEVTVFVAENITFQDNKYRNMHGLMIYIFLLILIFSDLHAIHF 1839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00474 1839 PANTHER DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED 315 818 - -
Pste2g00474 1839 SUPERFAMILY "Winged helix" DNA-binding domain 1658 1758 IPR036390 -
Pste2g00474 1839 Coils Coil 1091 1111 - -
Pste2g00474 1839 FunFam U5 small nuclear ribonucleoprotein helicase 1074 1130 - -
Pste2g00474 1839 SMART helicmild6 740 817 IPR001650 -
Pste2g00474 1839 SMART helicmild6 1541 1630 IPR001650 -
Pste2g00474 1839 SUPERFAMILY Sec63 N-terminal domain-like 959 1133 - -
Pste2g00474 1839 FunFam U5 small nuclear ribonucleoprotein helicase 932 1073 - -
Pste2g00474 1839 CDD SF2_C_Ski2 622 818 - -
Pste2g00474 1839 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1287 1462 IPR014001 -
Pste2g00474 1839 FunFam Activating signal cointegrator 1 complex subunit 1242 1469 - -
Pste2g00474 1839 PIRSF BRR2 19 1835 - -
Pste2g00474 1839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 607 IPR027417 -
Pste2g00474 1839 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 432 614 IPR014001 -
Pste2g00474 1839 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1489 1687 IPR001650 -
Pste2g00474 1839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 617 838 IPR027417 -
Pste2g00474 1839 CDD SF2_C_Ski2 1469 1642 - -
Pste2g00474 1839 FunFam RNA helicase, activating signal cointegrator 1 1132 1241 - -
Pste2g00474 1839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1464 1658 IPR027417 -
Pste2g00474 1839 SMART ultradead3 1274 1474 IPR014001 -
Pste2g00474 1839 SMART ultradead3 419 630 IPR014001 -
Pste2g00474 1839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1165 1462 IPR027417 -
Pste2g00474 1839 Gene3D - 1076 1129 - -
Pste2g00474 1839 Gene3D - 411 622 IPR027417 -
Pste2g00474 1839 Pfam Sec63 Brl domain 1746 1799 IPR004179 -
Pste2g00474 1839 CDD DEXHc_ASCC3_2 1277 1465 - -
Pste2g00474 1839 FunFam U5 small nuclear ribonucleoprotein helicase 1660 1753 - -
Pste2g00474 1839 Gene3D - 840 930 IPR036388 -
Pste2g00474 1839 Gene3D - 1660 1752 IPR036388 -
Pste2g00474 1839 SMART AAA_5 1292 1463 IPR003593 GO:0016887
Pste2g00474 1839 SMART AAA_5 437 618 IPR003593 GO:0016887
Pste2g00474 1839 FunFam Activating signal cointegrator 1 complex subunit 3 1470 1659 - -
Pste2g00474 1839 CDD DEXHc_ASCC3_1 422 618 - -
Pste2g00474 1839 SMART Sec63_2 931 1238 IPR004179 -
Pste2g00474 1839 Pfam DEAD/DEAH box helicase 425 598 IPR011545 GO:0003676|GO:0005524
Pste2g00474 1839 Gene3D - 1243 1469 IPR027417 -
Pste2g00474 1839 Pfam Sec63 Brl domain 931 1236 IPR004179 -
Pste2g00474 1839 SUPERFAMILY "Winged helix" DNA-binding domain 838 943 IPR036390 -
Pste2g00474 1839 Gene3D C2 domain 1132 1241 IPR035892 -
Pste2g00474 1839 Pfam DEAD/DEAH box helicase 1280 1444 IPR011545 GO:0003676|GO:0005524
Pste2g00474 1839 Gene3D - 932 1073 - -
Pste2g00474 1839 Gene3D - 1753 1817 - -
Pste2g00474 1839 FunFam U5 small nuclear ribonucleoprotein helicase 840 931 - -
Pste2g00474 1839 FunFam RNA helicase, activating signal cointegrator 1 411 622 - -
Pste2g00474 1839 Gene3D - 623 818 IPR027417 -
Pste2g00474 1839 Gene3D - 1470 1659 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00474 Pste-Chr2 4343901 4385230 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00474 2 4343901 4385230 Pste2g00474 2 4343901 4385230 ECH