Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00381 CTCACTGACTCCTCTCTCATTCCGCTCAAAACCCAACCCTCACTCAAACCCGACCCGACCCGTTTGAAAGGCGTCATGAAGGTCCGGTCGGTGAAGCTGCGGGAGGTCCACGCCGCGAAGGGCGGCGGCGCGTCCTTCTGCTCCGTCCTTTGGGACCAGAAAGCGCAGCATTTGGTCACCGCCTCCTCTTCCGACGTCTCCATCAGCATCCACGACCCGCTTTTTCCCTCCCTCGCTCCGAAGACCCTCCGCCACCACCGCGACGGCGTAACCGCCTTGGCCCTTAGCCCCAATTCCACTTGCCTCGCTTCCGGATCCGTCGATCACTCCGTCAAACTCTACAAGTTTCCCGGTGGAGAGTTTGAGAGAAATATTACAAGGTTTACCCTTCCAATACGTTCCCTGGCGTTTAACAAATCAGGGAGCATGCTTGCTGCGGCTGGTGATGATGATGGTATCAAGCTTATAAACACATTTGATGGTACCATTGCGAGGGTTCTAAAAGGACATAAAGGGTCTATTACTGGCTTGGCTTTTGACCCTAATGGTGAATACTTGGCCTCTCTTGATTCAACTGGAACTGTTATTTTGTGGGAGCTTCACTCTGGGAAAATCATTCATAACCTCAAAGGCTTAGCTCCTGACACTGGACTGGATGTTACAACTATGAATGTTCTTTGCTGGAGTCCTGATGGTGAGACTTTAGCTGTTCCTGGGTTGAGAAATGATGTGGTAATGTATGATAGGGACACTGCTGAGAAGTTGTTTTCTTTGAGAGGTGATCACACCCAGCCAATATGTTACTTGTGTTGGTCACCCAATGGCAAGTACATTGCTACCTCTGGTTTAGACAGGCAGGTTCTGATTTGGGATGTTAGCAGGAAGCAGGACATTGACAGACAGAAGTTTGATGAAAGAGTTTCTTGCATGGCGTGGAATCCAATTGGGAATGCCTTGGCTGTTGTTGATGTTATGGGGAAGTATGGTATTTGGGACAATGTTATTCCTTCGTCTATGAAGTCTCCAACTGAGGATATACCTGTGAAACACAAGAGCAATGGGGTTCTTTTGTTTGATGAGGAAGATCCTGAAAATAGTGAAAGTAGAAGCTTGAGTGATATTGGTCAAAAAAGCCTTGAAGAGTCTGAGCCACCTAGCAGGAAAAGATTGCGTAAACAGTCTTTGAGTGAGGAAAATTTAGGTGAGGATGCAGATGAGGAAATTGAATCTTATCCTAAGGTTGATTCTCACAAAAAACGAAATCGACCGAGCAAGGAAAATTTGGAGAGTGGGAATATGGGATTTGGAAGCTCCATGGTAACTTCTAAGGCAAAGATGCAGGAGGCATTTCAACCAGGAGCTACTCCTGCACTGCCTGGGAAAAGGCGTTTTTTGTGCTACAATATGCTTGGGTGTATAACCTCTATTGAACATGATGGATACTCTCATATTGAGATTGATTTTCATGATACTGGAAGCACATCACGAGTTCCGTCTATGACTGATCATTTTGGATTTACAGTGGCGGCACTGAGTGAGAGTGGGAGTGTCTTTGCAAATCCTTGTAAGGGGGAGAAGAACATGAGTACCCTCATGTATCGCCCGTTTAGTAGCTGGGCAAATAATAGTGAGTGGTCTATGCGCTTTGAAGGAGAAGAGGTGAAGGTTGTTGCACTTGGTGCTGCTTGGATTGCTGCGATAACTACTTTTAACTATGTTCGCATCTTTTCTGAGGGTGGTTTGCAGAGAGATGTGTTTTCACTAGATGGGCCGGTGGTGACTGCATCTGGTTTCAGGGATACACTTGCAGTTGTCACTCATGCTTCCAATGGCCTTTACTCAAATGATCAGATGCTAGAGTTTATAGTATTTAATATTCCTCGTGGGACCCAACTCCTACAAGGTCGCTTGCCAGTATCTCCTGGTTCATCTCTAAGTTGGTTTGGGTTTAGTGAAGAAGGTCAACTATGTTCGTACGATTCAAAGGGTGTGCTAAGATCATATACAAGCAAGTTTGGTGGTAGATGGATCCCACTCTTCAGTGCTAGTAAGGAGAAGTCAGATGAAAATTATTGGGTGACGGGGTTGAACTCAAGCAAGTTATTTTGTGTGGTATGCAAGAAGCCTAACAACTTCCCTGAGGTGATGCCTAAGCCAGTTCTCACTCCGATGAATCTTTCATTTCCTCTTGCTTCCTCTGACTTGGGTTCTGAAGTCCATGAAAACGAGTTTATGATGACCAACTTACGTCTCTATGAGATTCAGAGAAGAATGGAAGAAATGGCTTCTCTTGGTCTGGACACAACTTCACTTGATGACGATGCTTTTGATTTGGAAGCAGCACAAGATAAATGCATACTGAGGCTTATAGCATCCTGCTGTAACAGTGATAAGCTTGTGCGAGCTACTGAACTTATGATGCTTTTGACTCTGGAAAAGTCAATGAGAGGTGCAATAAAACTTGTTACTGCTCTGAAGCTTCCAAACTTGGCTGAAAGGTTCAGCAGCATATTGGAGGAAAGGCTACATGATGAAGCCAAAAAAGCCATGGAAACCAACATTAAAGAAAACTCTGTTGCACCCGTTACAGCTGATGCTCTTCATGGTGGAAGCAAGGCCCCAACTCACACTGAGACATTAAATGCAGTTACCATGTCATCACCACAATTTTCTGCTCCATCATTCATGAAGAAAGACAAAACACAAGAGGGAGCTAAAACTGGCATAGGTAAAGCTGCAATGGTAAATGCAACTCCTAAGCTAAAGCAGGCAGGGAATGAAACAAGTGACAAGGTGGCAAAGGTGCAACAAACGCCTAATCCATATGATTCCTCTACGGATTTGTCAAAAAGGAATGGACTTAACAGGTCAGAGACTAGTTTGGGACAATCAAATCGATCTTCCAATCCATTTTTGAAGTCAGAGACTAGTTTGGCACAATCAAGTCGTCCGTCCAATCCATTTTTGAAGACTAATATCAAGTGAAGAAATTCATTCAATATGAAAAACGCGATGGAGGTTTCGGGTAGTTTAAAATCAGTTATCGGAAGGAATAGGGTGTTACAGAAAAAGAGGCTTGCGTCTAATTTATAACCTTCAATTTATAAAGCAAAAAGAGCCTATAGAAAATGGAACCCTTTGTATATTACCAGAAAGTAGTATGGTAAGTATTTTTTTTTAATTCATTATAAATTCTTCGGACTATTGAATTGGCATGCATGCTCTCGTCTCTTAAAGTTACATGGTTGTATATAAACCGAAGTGTACCTTTACACCCTCTTTGTTCACGAGGTGGATCAGGGTCTCTTCAAAATTTATAGGTTTAAGTTTCGGCATTTTTCCC 3343 0.4382 MKVRSVKLREVHAAKGGGASFCSVLWDQKAQHLVTASSSDVSISIHDPLFPSLAPKTLRHHRDGVTALALSPNSTCLASGSVDHSVKLYKFPGGEFERNITRFTLPIRSLAFNKSGSMLAAAGDDDGIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASLDSTGTVILWELHSGKIIHNLKGLAPDTGLDVTTMNVLCWSPDGETLAVPGLRNDVVMYDRDTAEKLFSLRGDHTQPICYLCWSPNGKYIATSGLDRQVLIWDVSRKQDIDRQKFDERVSCMAWNPIGNALAVVDVMGKYGIWDNVIPSSMKSPTEDIPVKHKSNGVLLFDEEDPENSESRSLSDIGQKSLEESEPPSRKRLRKQSLSEENLGEDADEEIESYPKVDSHKKRNRPSKENLESGNMGFGSSMVTSKAKMQEAFQPGATPALPGKRRFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTSRVPSMTDHFGFTVAALSESGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEGEEVKVVALGAAWIAAITTFNYVRIFSEGGLQRDVFSLDGPVVTASGFRDTLAVVTHASNGLYSNDQMLEFIVFNIPRGTQLLQGRLPVSPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSKFGGRWIPLFSASKEKSDENYWVTGLNSSKLFCVVCKKPNNFPEVMPKPVLTPMNLSFPLASSDLGSEVHENEFMMTNLRLYEIQRRMEEMASLGLDTTSLDDDAFDLEAAQDKCILRLIASCCNSDKLVRATELMMLLTLEKSMRGAIKLVTALKLPNLAERFSSILEERLHDEAKKAMETNIKENSVAPVTADALHGGSKAPTHTETLNAVTMSSPQFSAPSFMKKDKTQEGAKTGIGKAAMVNATPKLKQAGNETSDKVAKVQQTPNPYDSSTDLSKRNGLNRSETSLGQSNRSSNPFLKSETSLAQSSRPSNPFLKTNIK 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00381 969 MobiDBLite consensus disorder prediction 381 401 - -
Pste2g00381 969 Gene3D - 2 98 IPR015943 GO:0005515
Pste2g00381 969 ProSiteProfiles Trp-Asp (WD) repeats profile. 234 275 IPR001680 GO:0005515
Pste2g00381 969 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 58 90 - -
Pste2g00381 969 Pfam Anaphase-promoting complex subunit 4 WD40 domain 144 186 IPR024977 -
Pste2g00381 969 Pfam Anaphase-promoting complex subunit 4 WD40 domain 201 288 IPR024977 -
Pste2g00381 969 ProSiteProfiles Trp-Asp (WD) repeats profile. 58 99 IPR001680 GO:0005515
Pste2g00381 969 MobiDBLite consensus disorder prediction 334 374 - -
Pste2g00381 969 FunFam Transducin family protein / WD-40 repeat family protein 195 322 - -
Pste2g00381 969 CDD WD40 10 310 - -
Pste2g00381 969 PANTHER WD REPEAT AND HMG-BOX DNA BINDING PROTEIN 1 957 - -
Pste2g00381 969 Pfam Minichromosome loss protein, Mcl1, middle region 424 705 IPR022100 -
Pste2g00381 969 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 234 268 - -
Pste2g00381 969 SUPERFAMILY WD40 repeat-like 19 307 IPR036322 GO:0005515
Pste2g00381 969 MobiDBLite consensus disorder prediction 898 969 - -
Pste2g00381 969 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 142 179 - -
Pste2g00381 969 SMART WD40_4 51 90 IPR001680 GO:0005515
Pste2g00381 969 SMART WD40_4 7 47 IPR001680 GO:0005515
Pste2g00381 969 SMART WD40_4 135 174 IPR001680 GO:0005515
Pste2g00381 969 SMART WD40_4 177 223 IPR001680 GO:0005515
Pste2g00381 969 SMART WD40_4 226 266 IPR001680 GO:0005515
Pste2g00381 969 SMART WD40_4 93 132 IPR001680 GO:0005515
Pste2g00381 969 SMART WD40_4 269 307 IPR001680 GO:0005515
Pste2g00381 969 ProSitePatterns Trp-Asp (WD) repeats signature. 253 267 IPR019775 -
Pste2g00381 969 ProSiteProfiles Trp-Asp (WD) repeats profile. 142 183 IPR001680 GO:0005515
Pste2g00381 969 MobiDBLite consensus disorder prediction 864 885 - -
Pste2g00381 969 MobiDBLite consensus disorder prediction 334 412 - -
Pste2g00381 969 Gene3D - 99 337 IPR015943 GO:0005515
Pste2g00381 969 Pfam WD domain, G-beta repeat 56 89 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00381 57 272 Miscellaneous Gene Families AT5G08390 23.394 6.45e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00381 2 3258196 3263807 Pste2g00381 2 3258196 3263807 ECH