Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00245 GATCATTCGTTTTTTAGCTTTGTAATCTCTTGGAAATCATAGACTGAAAATGACAAGGTCTGGGAGTATCCCTGGCAGCTATTACAAAACACATTCTCTCTAGACTTAGATAAAATCGAAATGTCCATGGAGAAGACTGGGTTGTGTGTGTGGCTTACAGTCTTGCTGGGCTGTGTTCTCTTTCGCTCCGCGGAATCCAAGTTTATAAGGTACAACACAACCTCAACCATTGTTCCTCACAAGCTCAACGTTCACTTGGTCCCTCACTCTCACGACGATGTTGGCTGGTTGAAGACCGTTGATCAGTACTATGTCGGTTCCAACAATTCTATTCAGGGAGCGTGCGTGCAAAACGTCCTCGATTCCCTCGTACCTGCATTGTTGGCAAACAAGAATCGCAAGTTCATATATGTTGAACAGGCGTTTTTCCAGCGATGGTGGAGGGAACAGAGTGATGCTATCCAGATCATAGTCAAGGAGTTGGTCAACTCTGGTCAATTGGAGTTCATAAATGGTGGTTATTGTATGCATGATGAGGCTACTGCTCATTACATTGAGATGATTGATCAGACAACTCTTGGACATCGATTTATCAAAGAAGAATTTGGAGTGACACCGAGAATAGGGTGGCAAATTGATCCATTTGGACATTCTGCAGTTCAGGCCTACTTGTTGGGGGCAGAGGTTGGATTTGACTCTCTATTCTTTGCACGGATTGACTACCAAGACAGAGCTAAGAGAAAAGATGAAAAAACTCTGGAAGTTGTGTGGCGGGGCTCTAAGAGCCTTGGTTCATCATCACAGATATTTTCTGGTGCGTTTCCTGAGAATTATGAACCTCCGAACAATTTCTACTATGAAGTAAATGACGATTCTCCCATTGTTCAGGATGATGTCCATTTATTTGATTACAATGTCCCTGAAAGGGTAAATGAGTTTGTTGCAGCCGCAATATCACAGGCCAATATTACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAATACGCAGAAACCTGGTTTCGGCAAATGGACAAGTTTATCCACTACGTTAATCAAGATGGTCGTGTTAATGCTTTATACTCGACTCCATCAATATATACTGATGCAAAACATGCTGCAAATGAGGCCTGGCCAATCAAAACTGATGACTACTTTCCGTATGCAGACCGTGTAAATGCCTATTGGACGGGGTATTTTACAAGCAGGCCAGCTCTCAAAGGATATGTCAGATTTTTGGGTGGCTACTACTTGGCAGCAAGGCAGTTGGAGTACTTTAAAGGGAAGAGTGCCTTAGGTCCGAAAACTGACTCTTTGGCTGAAGCTTTGGGTATTGTTCAACACCATGACGCGGTATCTGGCACAGAGAAGCAGCACGTTGGTGATGATTATGCTAAACGACTTTCAATAGGTTACACAGAGGCTGAGAAAGTTGCTGCTGTATCACTTGCTTGTTTGACAGAGGGAGCAACCAAAACAGAAGTTGACTTCTCAAATGGGAAAAACCTGGTGGTTGTTGCTTACAATCCTCTGGGATGGAAAAGAGAGGATATCATCAGGATTCCCGTTGTCAATGGAAATGTTGTTCGGGATTCCAGTGGTAAAAAAATCCAATCCCAGCTGGTGCCAATACATCATACTTTTCTTGGTTTAAGAAACTACCACACTTTGGCATACTTGGGAGTGTCTCCAACTGTAAAACCCAAATACTGGCTTGTTTTTTCAGTAACAGTTCCCCCACTTGGTTTCAGCACTTACTACCTATCCTATGCCAAAAAAGAAGATACTATTTCAGATAGAGATACAGTGTACCAGTCATTGAATAAAAGTGATACGCTTACAGTGGGCCTAAAACACTTGAAACTAACTTATTCTGTGAAGGAAGGGAAACTTATTCGATATATAAACAGCAGAAGCAAGGTCAAAGAATCTCTAGAGCAGGCATATAAATATTACACCGGAATGGGAAATGATGGAACAAAAACTGCTCAGGCGTCTGGAGCATATGTTTTTCGCCCTCATGGTTCACCCTCAACCATCAAATCCAATGGGAAGACTCCTCTCACAGTTTTTAGGGGACCAATTGTGCATGAAGTACATCAGAAGATCAAGTCATGGATATACCAGGTTACTAGATTGTACAAGGGGAAAGAACATGCAGAAGTTGAGTTTATTGTTGGACCTATACCAATTGGTAATGGTAAGGGCAAGGAAATTGCAACTGAGATTAATACAAATCTGGCAAGCAATAAAACCTTCTATACTGATTCCAATGGACGTGATTTCATTGAGCGCGTGCGAGACTATAGAAAAGACTGGCACTTGGAAGTAAATCAACCTGTTGCTGGGAATTATTACCCTATCAACCTTGGAATTTACCTGAAAGATAAAAGAAAAGAGTTCTCTATATTGGTGGATAGAGCAGTGGGGGGCTCCAGCATCATAGATGGACAATTGGAACTCATGGTTCATAGGAGGTTAGTTGAGGATGATTCCAGAGGTGTTTCAGAGGCACTGAATGAAACAGTTTGCATCCATCATAAATGCACTGGGTTAACTGTGCTAGGAAAGTACTATTTCAGAATTGATCCTGTAGGAGAGGGTGCTAGATGGCGTCGAGCATTTGGTCAGGAGATATACTCACCCCTTCTTTTGGCCTTCACAGAGAATGATGGTCACTGGGGAGATTCTCATGTCACAACCTTCTCAGGAATAGATTCCTCGTACAATTTACCAGATAACGTTGCAATAATAACACTCCAGGATCTGGGTGACGGAAAAGTTCTCCTTCGACTGGCACACTTATACGAGATTGATGAGGACAAGGATCTTTCAGCTAAGACAACTGTAGAACTTAAAAAAGTGTTTCCCAACAAACAGATAAACAAAATTACTGAAGTCAACTTATCAGCAAACCAAGAAAGAGCAGAAATGGAGAGAAAGAGACTGGTTTGGCAAGTTAAAGGGTCACCTCCAGAACCTAAGGTGTGGAGGGGAGGACAAGTAGATCCAGAAAAACTAATTGTAGAACTTGCTCCAATGGAGATACGGACTTTTGTTATCAGTTTTAAGCATTAAAAGCCCACCAGGTGTATGGATTCAAGTTCATTTCATTGGTAAAGTGCTGCATTGCGTCTATCTTCTTCATTAACATTTAACAAAAATTTATGACCCTATTTTTTCTTTTTACTTAATCGCAATTTTAGTTCTTATACTTTGTAGAATTATAGTTCATGTATGAGTTTAGTTTTTCCAGTTTTAATTATTCATGTTTA 3290 0.4125 MSMEKTGLCVWLTVLLGCVLFRSAESKFIRYNTTSTIVPHKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPALLANKNRKFIYVEQAFFQRWWREQSDAIQIIVKELVNSGQLEFINGGYCMHDEATAHYIEMIDQTTLGHRFIKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFARIDYQDRAKRKDEKTLEVVWRGSKSLGSSSQIFSGAFPENYEPPNNFYYEVNDDSPIVQDDVHLFDYNVPERVNEFVAAAISQANITRTNHIMWTMGTDFKYQYAETWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKHAANEAWPIKTDDYFPYADRVNAYWTGYFTSRPALKGYVRFLGGYYLAARQLEYFKGKSALGPKTDSLAEALGIVQHHDAVSGTEKQHVGDDYAKRLSIGYTEAEKVAAVSLACLTEGATKTEVDFSNGKNLVVVAYNPLGWKREDIIRIPVVNGNVVRDSSGKKIQSQLVPIHHTFLGLRNYHTLAYLGVSPTVKPKYWLVFSVTVPPLGFSTYYLSYAKKEDTISDRDTVYQSLNKSDTLTVGLKHLKLTYSVKEGKLIRYINSRSKVKESLEQAYKYYTGMGNDGTKTAQASGAYVFRPHGSPSTIKSNGKTPLTVFRGPIVHEVHQKIKSWIYQVTRLYKGKEHAEVEFIVGPIPIGNGKGKEIATEINTNLASNKTFYTDSNGRDFIERVRDYRKDWHLEVNQPVAGNYYPINLGIYLKDKRKEFSILVDRAVGGSSIIDGQLELMVHRRLVEDDSRGVSEALNETVCIHHKCTGLTVLGKYYFRIDPVGEGARWRRAFGQEIYSPLLLAFTENDGHWGDSHVTTFSGIDSSYNLPDNVAIITLQDLGDGKVLLRLAHLYEIDEDKDLSAKTTVELKKVFPNKQINKITEVNLSANQERAEMERKRLVWQVKGSPPEPKVWRGGQVDPEKLIVELAPMEIRTFVISFKH 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00245 990 Gene3D - 454 579 IPR013780 -
Pste2g00245 990 SMART Alpha_mann_mid_2 359 433 IPR015341 GO:0004559|GO:0006013
Pste2g00245 990 FunFam Alpha-mannosidase 321 400 - -
Pste2g00245 990 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 879 984 IPR041147 -
Pste2g00245 990 SUPERFAMILY Families 57/38 glycoside transferase middle domain 358 452 IPR028995 -
Pste2g00245 990 Coils Coil 926 946 - -
Pste2g00245 990 Pfam Alpha mannosidase middle domain 359 450 IPR015341 GO:0004559|GO:0006013
Pste2g00245 990 CDD GH38N_AMII_LAM_like 42 318 - -
Pste2g00245 990 FunFam Alpha-mannosidase 865 990 - -
Pste2g00245 990 FunFam Alpha-mannosidase 579 846 - -
Pste2g00245 990 Gene3D Glycoside hydrolase 38, N terminal domain 42 322 IPR027291 -
Pste2g00245 990 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pste2g00245 990 PANTHER ALPHA-MANNOSIDASE 22 990 - -
Pste2g00245 990 Pfam Glycosyl hydrolases family 38 N-terminal domain 43 354 IPR000602 GO:0004559|GO:0006013
Pste2g00245 990 FunFam Alpha-mannosidase 401 457 - -
Pste2g00245 990 FunFam Alpha-mannosidase 42 322 - -
Pste2g00245 990 SUPERFAMILY Glycoside hydrolase/deacetylase 31 355 IPR011330 GO:0005975
Pste2g00245 990 Gene3D - 864 990 - -
Pste2g00245 990 FunFam Alpha-mannosidase 456 579 - -
Pste2g00245 990 SUPERFAMILY Galactose mutarotase-like 460 988 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pste2g00245 990 Gene3D Glycoside hydrolase family 38, central domain 402 453 IPR037094 GO:0004559|GO:0006013
Pste2g00245 990 Gene3D Glycoside hydrolase family 38, central domain 323 401 IPR037094 GO:0004559|GO:0006013
Pste2g00245 990 Gene3D - 580 846 - -
Pste2g00245 990 Pfam Glycosyl hydrolases family 38 C-terminal domain 583 798 IPR011682 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00245 Pste-Chr2 1521717 1530597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00245 3 902 Glycoside Hydrolase AT5G13980 68.432 0.0 1309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00245 2 1521717 1530597 Pste2g00245 2 1521717 1530597 ECH