Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00228 CGTTACACTGCACTTTTCGATGGGAAATTGCTTATCCGACGTGGCAGCAGGTCGCGCCGCCATAGGCGGCACAGCCGGCGATTTTCACAATCTGGCCGGCGCTCCGAACGACGCCGTTGAGAACTTCCTCAGGTCTCGCGGCCACCACGGCCTCTTCTCGCAAATCGAGTTGTCGTTTTCGGCTTCTGGATTGCCTGATCGTGATGTGCTCTTCAAGAGTAATCCCATGATGGTTCTTTATGCAAGAGGAAAAAATGGAGCACTTGAGGAGCTTCGCCGCACAGAAGTAGTTCTGAATTCATCAACTCTCACATGGATCGCTAAGCATACCCTCATTTATCATTTTGAGGTTGTTCAAGTTTTAGTGTTTCGTGTGTATGATGTTGATACTCAGTTTCACAATGTAGATATAAAGATGCTTGAGTTAGATGAGCAGCAATTTCTAGGCGAGGCAACCTGTGTATTATCTCAGATAATCACGCAACCTGATCAATCATTGACTATAGATCTACACACAGAAGATTCTATCAGATCTACTCTTGCCAAAAACTGTGGGAAACTCACTGTGCATGCTGAGGAATGCATTAGCTCAAAGACCGCAATAGAGATCACATTCAGGTGTTCAGATTTGGAATACAAGGACCTCTTCTCAAGAAATGACCCCTTTTTATTGGTATCCAAAGTTGCGGAAGGTGGTGCACAAATTCCAATTTGCAAAACAGAAGTTATAAGGAATGATCTCAACCCAATATGGAAATCGGTGTTTGTGAATATTCAACAAGTAGGAAGCAAGGACATTCCTTTGATAATAGAGTGCTTCAACTTTAATACCAATGGAAAACATGATTTAGTCGGAAAAGTGCAGAGATCTTTGGCAGAGTTGGAGGACATTCATAATAATGGCCAAGGAGAGAATTTAACTTTGCCTTCTGCTGGTGGACAAAACCATGATAACAAGTTGTTAAAGAGCAAACTATTTGTGGAAAAATTTACTGAAAGTATCCAATATACTTTCTTGGATTACTTGGCGGGGGGATTTGAATTGAACTTCATGGTGGCTGTTGACTTTACAGCTTCAAATGGAAATCCACGTCTTCCAGATTCTTTGCATTATATTGATCCTTCAGGACGGCCAAATGCATACCAGAGGGCAATTGTTGAGGTTGGGGAAGTGTTACAGTTTTATGATTCAGACAAACGATTTCCAACTTGGGGATTTGGGGCACGACCAATTGATGGTCCTGTTTCCCATTGTTTCAATTTGAACGGAAGTAGTCATTATTGTGAGGTGGAAGGGATCCAAGGAATTATGATGGCTTACACAAGTGCCCTGCATAATGTATCTCTTGCAGGACCTACTCTTTTTGGACCTATCATAAGCACTGCTGCACTTATTGCCAGCCAAGCTGTAGCAAATGGTGGAAGAAAGTACTTTGTGTTATTGATAATCACAGTAAGAACCTCTCTAGTCCATGTTGACAGTGTAGACTTGCATATTTTGTTGAATTCCCCTGTAGGGGATGGAGTAGTGACAGATCTCCAAGAAACAAAAGATGCTATTGTAAAAGCATCTGACCTGCCATTATCAATCCTTATTGTTGGGGTAGGAGGAGCTGATTTCAAAGAAATGGAGGTTTTGGATGCAGACAAGGGAGAGAGGCTAGAAAGCTCATATGGACGCGTTGCTTCACGTGATATAGTCCAGTTTGTTCCATTTCGGGAGGTTCAAAGTGGATTTTCAGTTGTTCAAGCACTTCTTGCAGAATTACCGACTCAATTTTTAACTTACGTGCGAAGCAGAAATATCCAACCGAGCATCTAGACCTGTAAAAGTTGTACATAGAGAAGTTTTCTATTCATTGATCATTGTGCAATTTCGAGGTCCTTTTCAGTTCTTCAATCAACGAATTCGGCTAAAAGGCTGAAAACTTATGCTTTAAGCGAATTAACGGCTCTAGAAATTAAGGTTCGCCTGCTAGCTGTCTTATCCAAAGGATATGTCTGATCCAGCCTTATGATTGGCATTTCCTTTTCTTTTCTGTGCACGTGTCTTTTGGGGCTTGCCTAGGTGATTGGATTGTCTGAAAATAGTAACACCACAAGTTGGAATCCCTGTTTCTTCTAAATGAGGACAAAGTGTTAGTCCTTCTGTCTGCACTTCATGATATGATTTGTGATGGAGATCCAATAATTTTGGGATGTCTTTAGATAGCATTATTACGAACACAAGAGCATCTGTATCGAAAAAAGAACTTTAGCACCGCTGAATCATTAATCATTATACCCATTTTGTTTCATGGCTGTAAAGGTTCATTTAAAAGGAAAAGGTATTAGACAGAATTTGAAACTTTGGAACAGGAAGATGTGTAAAGGTTGCAAATTAGTGTTGATATAATGAAAGTTTAATAGCAGATCTGTCTCGGGATTTCCC 2431 0.4097 MGNCLSDVAAGRAAIGGTAGDFHNLAGAPNDAVENFLRSRGHHGLFSQIELSFSASGLPDRDVLFKSNPMMVLYARGKNGALEELRRTEVVLNSSTLTWIAKHTLIYHFEVVQVLVFRVYDVDTQFHNVDIKMLELDEQQFLGEATCVLSQIITQPDQSLTIDLHTEDSIRSTLAKNCGKLTVHAEECISSKTAIEITFRCSDLEYKDLFSRNDPFLLVSKVAEGGAQIPICKTEVIRNDLNPIWKSVFVNIQQVGSKDIPLIIECFNFNTNGKHDLVGKVQRSLAELEDIHNNGQGENLTLPSAGGQNHDNKLLKSKLFVEKFTESIQYTFLDYLAGGFELNFMVAVDFTASNGNPRLPDSLHYIDPSGRPNAYQRAIVEVGEVLQFYDSDKRFPTWGFGARPIDGPVSHCFNLNGSSHYCEVEGIQGIMMAYTSALHNVSLAGPTLFGPIISTAALIASQAVANGGRKYFVLLIITVRTSLVHVDSVDLHILLNSPVGDGVVTDLQETKDAIVKASDLPLSILIVGVGGADFKEMEVLDADKGERLESSYGRVASRDIVQFVPFREVQSGFSVVQALLAELPTQFLTYVRSRNIQPSI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00228 600 FunFam Protein BONZAI 1 51 194 - -
Pste2g00228 600 ProSiteProfiles C2 domain profile. 177 302 IPR000008 -
Pste2g00228 600 Pfam Copine 362 598 IPR010734 -
Pste2g00228 600 SUPERFAMILY vWA-like 341 547 IPR036465 -
Pste2g00228 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 196 289 IPR035892 -
Pste2g00228 600 CDD vWA_copine_like 312 587 IPR010734 -
Pste2g00228 600 CDD C2A_Copine 47 166 - -
Pste2g00228 600 ProSiteProfiles C2 domain profile. 28 162 IPR000008 -
Pste2g00228 600 SMART C2_3c 198 297 IPR000008 -
Pste2g00228 600 SMART C2_3c 48 161 IPR000008 -
Pste2g00228 600 FunFam Protein BONZAI 1 isoform A 195 314 - -
Pste2g00228 600 Pfam C2 domain 200 292 IPR000008 -
Pste2g00228 600 Pfam C2 domain 54 157 IPR000008 -
Pste2g00228 600 Gene3D C2 domain 195 313 IPR035892 -
Pste2g00228 600 Gene3D C2 domain 52 194 IPR035892 -
Pste2g00228 600 PANTHER COPINE 34 478 IPR045052 GO:0005544
Pste2g00228 600 CDD C2B_Copine 195 288 IPR037768 -
Pste2g00228 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 53 166 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00228 Pste-Chr2 1313952 1323238 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00228 2 1313952 1323238 Pste2g00228 2 1313952 1323238 ECH
Pste3g01312 3 8225430 8241654 Pste2g00228 2 1313952 1323238 PCT