Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00185 TAAGAATCATGTGAAGTGCCGCCACTCTTTCTCTCTCTCTATCTGTCGTTGGGTCAATCAAAAGCTTCAATCTTTACAATCCAACAAAACACCCACTTCTGGTTTGGTTTTGTTTAAACTTTTTTGAGAGCTTCTTCTTGTTGTTCTTCCAATGGCTGCAACTGCCCCAAGATTCATCAAGTGTGTGACAGTTGGTGATGGAGCTGTAGGGAAAACCTGCATGCTAATTTGCTATACCAGCAACAAATTTCCCACAGACTATATTCCCACTGTGTTTGATAATTTCAGTGCAAATGTGGTTGTTGAAGGAACAACTGTCAATTTAGGCCTTTGGGATACAGCTGGACAAGAGGATTACAACAGGCTGAGGCCCTTGAGCTACAGGGGGGCAGATGTCTTTGTCTTGGCTTTTTCTTTAGTTAGTCGGGCAAGCTATGAGAATGTGCTGAAGAAGTGGATCCCTGAACTCCAGCATTTTGCCCCTGGCATCCCAGTGGTATTAGTTGGCACAAAATTGGATCTGCGAGATGACAAACACTATATGGCTGATCATCCTGGTCTGGTGCCTGTGACTACTGAGCAAGGTGAGGAACTTCGTAAACAGATTGGAGCTACCTATTATATTGAGTGCAGCTCCAAAACTCAGCAGAATGTGAAGGCAGTTTTTGATGCTGCGATCAGAATGGTGATCAAGCCTCCACAAAAGCAAAGCGAGAAGAGGAAGAAAAAACCACGAGGCTGTTTCCTAAACGTCCTCTGTGGGAGGAACATTGTTCGTCTTAAATGAAACAGTATTTCATCCAAAGGTTTCACGTGCTAGGGGCAGAAGTGTGTTACCGCCATGTAGAAATTTTAAACTTAACGTAAACCACTTGGCTGGAATTTGAAGTATAACTTACATTTTGATTGTATTTTAATTTAATTAGATAGGTTTTTAATGTATTGAGGAAATATAAAACAGTTGCACACGGTAGCTTGTAAAGAAAGCACAGAGTGGATTTGTTGGCTAGCTACCGAATATTTTATTTGCTAGTGATCCAGTTTCAATGTACATACATGATCGTCCAAAATTAGCTTATGTTTCTGAGATTAATCATTACCAG 1103 0.4107 MAATAPRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDTAGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENVLKKWIPELQHFAPGIPVVLVGTKLDLRDDKHYMADHPGLVPVTTEQGEELRKQIGATYYIECSSKTQQNVKAVFDAAIRMVIKPPQKQSEKRKKKPRGCFLNVLCGRNIVRLK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00185 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 179 IPR027417 -
Pste2g00185 211 Pfam Ras family 10 180 IPR001806 GO:0003924|GO:0005525
Pste2g00185 211 SMART rab_sub_5 9 182 - -
Pste2g00185 211 SMART rho_sub_3 11 182 IPR001806 GO:0003924|GO:0005525
Pste2g00185 211 ProSiteProfiles small GTPase Rab1 family profile. 4 211 - -
Pste2g00185 211 FunFam Rac-like GTP-binding protein 3 2 200 - -
Pste2g00185 211 CDD Rop_like 8 180 - -
Pste2g00185 211 Gene3D - 3 200 IPR027417 -
Pste2g00185 211 PANTHER RHO FAMILY GTPASE 7 198 IPR003578 GO:0005525|GO:0007264
Pste2g00185 211 ProSiteProfiles small GTPase Ras family profile. 4 202 IPR001806 GO:0003924|GO:0005525
Pste2g00185 211 SMART ras_sub_4 6 182 - -
Pste2g00185 211 ProSiteProfiles small GTPase Rho family profile. 2 179 - -
Pste2g00185 211 NCBIfam small GTP-binding protein domain 9 173 IPR005225 GO:0005525
Pste2g00185 211 PRINTS Transforming protein P21 ras signature 9 30 - -
Pste2g00185 211 PRINTS Transforming protein P21 ras signature 32 48 - -
Pste2g00185 211 PRINTS Transforming protein P21 ras signature 111 124 - -
Pste2g00185 211 PRINTS Transforming protein P21 ras signature 49 71 - -
Pste2g00185 211 PRINTS Transforming protein P21 ras signature 157 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00185 Pste-Chr2 920595 926483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00185 5 195 EF-hand Containing Proteins AT5G27540 24.870 1.82e-16 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00185 2 920595 926483 Pste2g00185 2 920595 926483 ECH