Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g00081 ATGGTTTTATGGACCGACATGGTGATATAAAATGTTCCATGCATTTCCTCAAACACGCAACGTAACCATACCCTGCACATTATAGCCTTCTCTGGTTATCACTTAATGGTTGAATGAACTCAAAGATGAAATCTGAGAAGTTGGGATTGTTGGTGCTGCTAGTCTTGTTCAGCTCCTCTACTTGTTCCGCTTGGTTTGGTAGTAAACACAAAAGTTCCAGTTCAAGTGCAAGTGGAAGAAGCTCTTATCGTCAGGATGAACCCTCGTCGTCTTCATCATCATCATCGCCGTCACCGTTCATACTAAACCGTTTTCGTGCTGGCTCATCCGTTGTGTTCCCGGTTCACGGCAATGTTTACCCTGTTGGATTTTATAATGTTACTCTCAACATCGGCCAGCCACCTAGACCATATTTTCTTGATATTGACACGGGCAGCGACCTCACATGGCTTCAATGCGATGCCCCTTGTTCCCGTTGCTCTCAGACACCACATCCCCTCTATAGGCCCAGCAATGACTTAGTGCCTTGCAGGCATCCTCTCTGTGCATCATTGCACCACACTGATAACTATGACTGTGAAGTTCCACATCAATGTGACTACGAAGTTGAGTATGCAGATCATTACTCATCCCTTGGTGTACTTCTCCATGATGTCTACACTCTCAACTTTACAAATGGAGTTCAACTTAAAGTTCGTATGGCACTCGGATGTGGATATGATCAGATTTTTCCAGATCCTTCGCACCATCCATTAGATGGAATGCTCGGCCTTGGCAGGGGAAAAACCAGCTTGACATCACAGCTCAATAGTCAGGGTTTGGTGCGAAATGTGGTTGGACACTGTTTGAGTGCACAAGGAGGAGGATATATTTTCTTTGGAGATGTTTATGATTCTTCTAGACTAACTTGGACTCCATTGTCATCCAGAGATTACAAGCATTACTCGGCAGCAGGGGCAGCTGAACTCCTCTTAGGAGGGAAGAGGGGTGGGGTTGGAAATCTTCATGCTGTTTTTGACACTGGGAGTTCTTACACGTACTTCAACTCTAATGCTTACCAAGCATTACTTTATTGGTTGAGAAAGGATTTAAGTGGAAAGCCTGTAAAAGAAGCACATGTTGATCAAACTCTCCCTCTCTGTTGGCATGGTAAAAGACCTTTCAAAAGCATATATGAAGTGAGAAAATACTTCAAGCCAATCACACTTAGTTTCAGTAGCAATGGAAGAAGTAAAGCTCAATTTGAAATCCCTCCTGAAGGGTATTTGATAATCTCTAACATGGGAAATATTTGCTTGGGTATTCTAAACGGCTCTGAAGTAGGGTTGGGAGATCTGAACCTAATAGGAGACATATCCATGCTAAACAAAGTGATGGTATTTGACAATGACAAGCAGTTGATAGGATGGACACCAGCAGATTGTGACCGGGTTCCCAAATCCAGAGATGTCAGCATTTAATCACAAAAGATTCCTCCTCCAGCCTCTTGATTATACATTTATCATATCATCAAATAATAGCTTTTGTCCTACTTTATAGAACAAGATGGCTGGCTAATAAGAGTGTAGCATATGTTGTGTATAAAAATATATTGCTACGTGGTATAGCGATCTATACTGATTATTACTGTTTACAGTGTATATATCCGACTGGTAACACCTACAAAGTAACCAGTCACCATAAAATTACTTCACATACCTTAATTGGACAACTTAGGATTTAATTTGGCATCGGAAAGGCAAAGCGAAGAGTCAGAGTAATGCAGGTTGATGCAAATATTAGGTGCATCTCTTGGTTCTATAATTAATTTGCAGTTTCCTTGCAATAATATTATCAATCCA 1841 0.4144 MNSKMKSEKLGLLVLLVLFSSSTCSAWFGSKHKSSSSSASGRSSYRQDEPSSSSSSSSPSPFILNRFRAGSSVVFPVHGNVYPVGFYNVTLNIGQPPRPYFLDIDTGSDLTWLQCDAPCSRCSQTPHPLYRPSNDLVPCRHPLCASLHHTDNYDCEVPHQCDYEVEYADHYSSLGVLLHDVYTLNFTNGVQLKVRMALGCGYDQIFPDPSHHPLDGMLGLGRGKTSLTSQLNSQGLVRNVVGHCLSAQGGGYIFFGDVYDSSRLTWTPLSSRDYKHYSAAGAAELLLGGKRGGVGNLHAVFDTGSSYTYFNSNAYQALLYWLRKDLSGKPVKEAHVDQTLPLCWHGKRPFKSIYEVRKYFKPITLSFSSNGRSKAQFEIPPEGYLIISNMGNICLGILNGSEVGLGDLNLIGDISMLNKVMVFDNDKQLIGWTPADCDRVPKSRDVSI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g00081 448 PANTHER ASPARTYL PROTEASES 17 431 IPR001461 GO:0004190|GO:0006508
Pste2g00081 448 Gene3D Acid Proteases 62 256 IPR021109 -
Pste2g00081 448 Pfam Xylanase inhibitor N-terminal 87 257 IPR032861 -
Pste2g00081 448 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 299 310 IPR001969 GO:0004190|GO:0006508
Pste2g00081 448 FunFam Aspartic proteinase Asp1 isoform A 260 441 - -
Pste2g00081 448 FunFam Aspartyl protease family protein 64 257 - -
Pste2g00081 448 Gene3D Acid Proteases 257 441 IPR021109 -
Pste2g00081 448 Pfam Xylanase inhibitor C-terminal 296 433 IPR032799 -
Pste2g00081 448 ProSiteProfiles Peptidase family A1 domain profile. 87 433 IPR033121 -
Pste2g00081 448 PRINTS Pepsin (A1) aspartic protease family signature 93 113 IPR001461 GO:0004190|GO:0006508
Pste2g00081 448 PRINTS Pepsin (A1) aspartic protease family signature 299 310 IPR001461 GO:0004190|GO:0006508
Pste2g00081 448 PRINTS Pepsin (A1) aspartic protease family signature 409 424 IPR001461 GO:0004190|GO:0006508
Pste2g00081 448 MobiDBLite consensus disorder prediction 27 60 - -
Pste2g00081 448 SUPERFAMILY Acid proteases 79 440 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g00081 Pste-Chr2 283045 286301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g00081 71 443 Miscellaneous Gene Families AT1G44130 52.910 7.41e-143 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g00081 2 283045 286301 Pste2g00081 2 283045 286301 ECH