Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g04056 TGAATACTAATTTTCAATCTCTCCTAGCGTTGTTCATACTCAGTGAGAGAAACTCTCTCTCTGTCTCTCTAAAAACCCTATTACACAATCTGCTATCGAACTCCACAATGGCCAACAGCAATCTCCCTCGAAGAATCATCAAGCACCTGGGATTACTGCCTCCCCTTCTGAAGACAATATGCGATATTTCAATGTGATGATCCTTGGGCCAAGCCAGTCACCATACGAAGGAGGAGTTTTCAAGTTAGAACTATTTTTGCCAGAAGAATATCCAATGGCTGCTCCAAAGCTTGGCAGGATCTGTCTTGATATTCTGAAAGATAAGTGGAGTCCCGCCCTTCAGATACGCACTGTTCTATTAAGCATTCAAGCACTATTGAGTGCACCAAACCCAGATGATCCACTTTCTGAGAACATTGCCAAGCATTGGAAATCGAATGAGGCTGAGGCTGTCGAAACAGCAAAGGAATGGACCCGATTGTATGCTAGTGGCGCCTGATGATAATGAACTATTGGAGTGTTAATTCCTCGCAGCTCCCACTTACATGTTAATTTCTTCACTTGGAAGCTGCCTTATCATGAAACTTGTATGAATTTGTTGATCATTTACCTACCTATCTAACTATTTAGAACATGCTTCCATCATCGACTTCGGAGTCATTTAGTATTCTCAACAACATATATCATAGGCCAAAATTTGTGAATTAGTTTCTGTTCTCTTTATCTCAATGAATCATTCCAAGACTTGTTTTGCTAGTAACCAATAGTATTGGTTCTAAGCTGTAGTTACTTGTTCATGGATATTCTTTATTATGATATTATCTCTACATGTTAGGTCCTAGAATTTCTCAAAACTCTCGATCAAGCTTCTTCTGAATTGCAGCGGTGTATTTGGATTAAATTGAATTAAGTGCATATTTAAGTGAACTTATTTTAACTAAACTATTCTC 950 0.3863 MRYFNVMILGPSQSPYEGGVFKLELFLPEEYPMAAPKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g04056 106 CDD UBCc 4 99 IPR000608 -
Pste1g04056 106 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 1 91 - -
Pste1g04056 106 SUPERFAMILY UBC-like 1 103 IPR016135 -
Pste1g04056 106 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 104 IPR000608 -
Pste1g04056 106 Gene3D Ubiquitin Conjugating Enzyme 1 37 IPR016135 -
Pste1g04056 106 Pfam Ubiquitin-conjugating enzyme 2 98 IPR000608 -
Pste1g04056 106 Gene3D Ubiquitin Conjugating Enzyme 38 105 IPR016135 -
Pste1g04056 106 SMART ubc_7 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g04056 Pste-Chr1 22913456 22920047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g04056 8 71 Miscellaneous Gene Families AT3G17000 31.250 3.71e-06 42.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g04056 1 22913456 22920047 Pste1g04056 1 22913456 22920047 ECH