Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03854 GAAAATATGGTTTCAACTAAAGTCAGGATACAAAGAGAAAAAAGAGAGAGAGGAAGAGGAGGGTGAAAAGCACGCACAAAGAAAGATCGCAAATTGATTGATTCCAATTAATGGGTTTGGGATGTTGAAGCTGTGGATATCGAATTTGAATTTGCAATGAAAAGGGAAAAGCGGAAAGAACATAGCAGCAATGGTTATCATGATGGGTTTTTGTGTGATTATTACGATGGAGAGATAATACCGACCAGAGAACGTAGCCCTTCCGTCTCTTCATCGCCTCCCAGACTTGGTCACATCGAACACCATGTTTCCAAATTCGATACCTTGGCTGGTGTCGCTATCAAGTATGGTGTTGAGGTTGCAGACATCAAAAAGATGAATAACCTTGTTACAGACCATCAAATGTTTGCACTTAAAACTCTCCACATTCCGCTACCTGGAAAGCACCCTCCATCTCCTTGTTTCTCAAATGGTTCCTGTACTCCAGGTAACTCGGATCACAGTCCGCCTTATCAAGCAAACCGAGATCTGCTTGAATCATTTCAATCCTTGAGAATAAAGTCATCGGAGCGGAAGGTCTCCCCAGCCATGAGCTTACTGGGTTACTATGGACTTAAAGGGACCCCAAGTTCCTCAGAAGATGGTCCATTTCCAAGAAACTTACCTATGTCGGACCGACCTCTGAGTCATCACCGGAAATCCAAAAGTTTGGTCAATGTAATTTTGGAAGAGATGATGGAAAAATCGAACGATTCATTGGCTGCAGAAACCAGGGAAATTGACTCCAATAAGTGGAATGATAAGCCTGTCAAGAGATGTCAGAAATCTCTAGCTGACTTTACTAGGATACCAGAGTTGCTTTTGAGGGAGGATAATAGCAGCAATGGTGTTATTCCATCAAGAACAGGAAGGGGCTTAGCACTAAGACAGAATGCATCTAGCCGAACTGCAATGACAAGTGATTCTGAACCAATTGGTTGGAATCCTGTGGCAATGGGTGTGGGGGATGCTTCTATAAAACATGGTTCGTCTGGGGTGAGGAAATCATCAAGCACTTCTTGTTTACAGGATCAAGATAACAGTGGCTCGTCATCCATTTGGCCAACCTCAATGTGGAGTTTGAAACCAGATTTGCAGGCCCTTTCAACTGCAGCCATTGGAAAACCAATCTTTGATGGCTTGCCCAAGCCGATAACTGGTCGAAAAAATAAAGCTGCACTTGATTAATGTATAGAATTTTATGAACACAGTTTTGACCCCGTTTGTCAGGTTATGGAATCATTAGCCACCACATCAGTGGGTAGATTGGAGGAAGTAAAACTATGTAGAAAAAGGGACAAAATATCAAACATCACATTTTATTTCTCTTTGAATAGGGGCATTAGTTTTATGCCAGAAAGTACTTCAATTTATTTATTTATTTATTTTTCAGAAAAAGAAATTTTCTTGACTGCCTACTGGCCATCTTTGAAAAATACAAAACTGAAAGGACTAGATTCCTCAACCTTAGCGTTTA 1516 0.4116 MKREKRKEHSSNGYHDGFLCDYYDGEIIPTRERSPSVSSSPPRLGHIEHHVSKFDTLAGVAIKYGVEVADIKKMNNLVTDHQMFALKTLHIPLPGKHPPSPCFSNGSCTPGNSDHSPPYQANRDLLESFQSLRIKSSERKVSPAMSLLGYYGLKGTPSSSEDGPFPRNLPMSDRPLSHHRKSKSLVNVILEEMMEKSNDSLAAETREIDSNKWNDKPVKRCQKSLADFTRIPELLLREDNSSNGVIPSRTGRGLALRQNASSRTAMTSDSEPIGWNPVAMGVGDASIKHGSSGVRKSSSTSCLQDQDNSGSSSIWPTSMWSLKPDLQALSTAAIGKPIFDGLPKPITGRKNKAALD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03854 356 Gene3D LysM domain 33 99 IPR036779 -
Pste1g03854 356 SMART LysM_2 48 92 IPR018392 -
Pste1g03854 356 MobiDBLite consensus disorder prediction 286 317 - -
Pste1g03854 356 SUPERFAMILY LysM domain 47 92 IPR036779 -
Pste1g03854 356 MobiDBLite consensus disorder prediction 157 180 - -
Pste1g03854 356 Pfam LysM domain 49 92 IPR018392 -
Pste1g03854 356 PANTHER LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN 33 279 IPR045030 -
Pste1g03854 356 ProSiteProfiles LysM domain profile. 47 91 IPR018392 -
Pste1g03854 356 MobiDBLite consensus disorder prediction 291 317 - -
Pste1g03854 356 CDD LysM 55 91 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03854 Pste-Chr1 19395845 19400619 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03854 1 19395845 19400619 Pste1g03854 1 19395845 19400619 ECH