Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03760 GTAAGCATCATATATTCTCTCTCTAGTTTCCTATATGTAGAATGACTTTGGGTCTTCAACACTTGAAAGCCATAAACTACATTATACATTACATACTGCAAAATTAGCACAGCATGTCTAATGTAAGCTCACCACTTCCAATATTCGCCCATGATGATAAACCTCCCACAAAATTCACTCGACCCATTGCAAATTTTCCTCCTTCCTTTTGGGGTGATTATTTCCTTTCCCATCTTCCTACTTCTCAGGAACATGATAGTCACGTTAAAAAAGTTGGATTGTTAAAAGAGGAAGTGAGAAAGATACTTGTTGATAACGATTTTTCTTCCAAATTAAAGTTTATTGACTCAATTCAACGTTTGGGTATTTCCTACCATTTTGAACAAGAAATTGAGGGAGCATTGCATCAAATGTACAATATTTCAACAAAATACAGTACTATCATAACTTGCAATGGTGATCTTCATCAAATAGCTTTACTTTTTCGATTGCTTAGACAACAGGGATATCAAATCTCATCAAATATATTTTACAAATTCAAAGACGAAACCGGAAACTTTAGCACAAGGGTGGCCAACGATATAGAGGGTATGTTGAGCTTGTATGAAGCAACTGAACTAAGAATTCATGGAGAGAAAATACTTGAAGAAGCACATAATTTCTCTTTCATTCAGTTAAGTAAATTTGCAGCAGCACAATCAAGCCATTCTCTTACTTCACAAGTGAAGCATAGCTTAAGACGATCACTTCGTAAGGGGCTGCCCAGGCTGGAAGCAACATATTATATCTCTTTCTACCAAGAAGATCCTTCCCATGATGAAAATTTGCTAACACTTGCAAAACTAGATTTTAATATGTTGCAAGAGCTACACCAGAAAGAAATTAAAGATGTCACGAAGTGGTGGATTAAGGATTTAAATGTCTCAACAACATTGCCGTTTGTACGAGACAGGATTGTGGAAGGTTACTTTTGGATTCTGGGAATCTACTTTGAACCACAATATTCTCTTGCTAGAATGATAACAACAAAAGTGATTTCTCTATGTTCTGTCATTGATGACATGTATGATGCCTATGGGACCATTGACGAACTTGAGCTTTTTACCAATGCAATTGAGAGGTGGGACATTTGTTGCATGGATGATCTCCCTGCATACATGAAATTATGTTATAAGGCGATTTTGAATATTTTTGAAGAAATGGAGGAAGAGATGAGAAAGCAAAGAAGAGTATACTGCATCAAGTATGCTAAGGAAAATATGAAAAAACTAGTGAAGGCTCATATGGCTGAGGCAAGATGGCTTCATTGCAAGCACACACCAACAGTAGAGGAGTACATGCAAGTTCGAATTGTATCAAGTGGCTACCCAACTTTGATTACCATATGTTTTGTTGGCATGGAAGATACAACAGAGGAGGTCCTTAAATGGGCAATGAATGACCCTATAATTATTGTAGCTGCTTCAATTATTAGTAGGCTTATGGATGATATTGTTGGAAATGAGTTTGAACAGGAAAGAGAACACATTGCTTCAAGCATTGAATGCTATATGAAGCAACATAATACCTCAAGGCAATATGCCATGAAAGAACTACTTAAGATGGTTGGGAATGCTTGGAAGGACATTAATGAGGCATGCCTTAATCCTACTCAAGTGCCAATCCATTTTCTTCTACGTGTTGTCAATCTTGCACGCATGATGGACGTGCTTTACAAAGATGAAGATATCTATACAAATGCAGGAGGCTTAATGAAAGATTACATTCAAGCTTTACTAGTTAATAAGATGCCCTCTGCTATATAA 1805 0.3662 MSNVSSPLPIFAHDDKPPTKFTRPIANFPPSFWGDYFLSHLPTSQEHDSHVKKVGLLKEEVRKILVDNDFSSKLKFIDSIQRLGISYHFEQEIEGALHQMYNISTKYSTIITCNGDLHQIALLFRLLRQQGYQISSNIFYKFKDETGNFSTRVANDIEGMLSLYEATELRIHGEKILEEAHNFSFIQLSKFAAAQSSHSLTSQVKHSLRRSLRKGLPRLEATYYISFYQEDPSHDENLLTLAKLDFNMLQELHQKEIKDVTKWWIKDLNVSTTLPFVRDRIVEGYFWILGIYFEPQYSLARMITTKVISLCSVIDDMYDAYGTIDELELFTNAIERWDICCMDDLPAYMKLCYKAILNIFEEMEEEMRKQRRVYCIKYAKENMKKLVKAHMAEARWLHCKHTPTVEEYMQVRIVSSGYPTLITICFVGMEDTTEEVLKWAMNDPIIIVAASIISRLMDDIVGNEFEQEREHIASSIECYMKQHNTSRQYAMKELLKMVGNAWKDINEACLNPTQVPIHFLLRVVNLARMMDVLYKDEDIYTNAGGLMKDYIQALLVNKMPSAI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03760 563 FunFam Isoprene synthase, chloroplastic 68 234 - -
Pste1g03760 563 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 234 IPR008930 -
Pste1g03760 563 Gene3D Farnesyl Diphosphate Synthase 30 549 IPR008949 -
Pste1g03760 563 SFLD Isoprenoid Synthase Type I 236 559 - -
Pste1g03760 563 SUPERFAMILY Terpenoid synthases 234 560 IPR008949 -
Pste1g03760 563 Pfam Terpene synthase, N-terminal domain 33 208 IPR001906 GO:0010333|GO:0016829
Pste1g03760 563 CDD Terpene_cyclase_plant_C1 23 557 IPR044814 GO:0010333|GO:0016102
Pste1g03760 563 Gene3D - 68 234 IPR036965 GO:0010333|GO:0016829
Pste1g03760 563 PANTHER OS04G0344100 PROTEIN-RELATED 23 547 - -
Pste1g03760 563 Pfam Terpene synthase family, metal binding domain 239 504 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pste1g03760 563 SFLD Terpene Cyclase Like 1 C Terminal Domain 236 559 IPR034741 -
Pste1g03760 563 FunFam Isoprene synthase, chloroplastic 197 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03760 Pste-Chr1 18453467 18457749 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03760 1 18453467 18457749 Pste1g03760 1 18453467 18457749 ECH