Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03739 ATGTTGCTACAGATATCACCAAGTTTGAGGCATGTCACTGTGCTTCCGGGGAAAGGGTTGAAGGAGTTTATCAAAGTGAAGGTTGCTTCAAGGAGGCTTTCTTATAGGATGCTGTTCTATTCACTCTTGTTCTTCACATTCCTGCTTAGGTTTGTGTTTGTTTTGACAGCAGTGGATAGCATTGATGGAGAAAACAAGTGCTCTTCCATAGTGATGTACGGAATATTGGATCAACCCCTTAGCAAAGATGAGATAAAGGGAAGGACTGATATTCCTCAGACAATAGGAGAGTTCATGACCCAAATGAAGGAAGGTGGATATGATGCCAAAACATTTGCAATTAAACTAAGAGAAATGATAACATTTCTGGAACAAAGGACCAGAGAAGCCAAAGTCCAAGAATATCTGTATCGTCATGTAGCATCAAGCAGCATACCCAAACAGCTTCATTGCCTTGCCTTAAGGCTAGCCAATGAGCACACCAACAATGCCGCCGCAAGGCTTCAGCTTCCATCTGCAGAACTTGTCCCTGCCCTGGTTGACAACAACTTCTTTCACTTTGTTCTGGCCTCAGACAATGTGCTTGCTGCCTCTGTCGTTGCAAAATCTCTTGTTCGCAACAGTTTGCACCCTCGGAAGGTTGTCCTGCACATAATCACAGACAGAAAAACTTTCTATCCTATGCAGTCTTGGTTCTCCTTACACTCTTTATCTCCTGCCATCATTGAGGTCAAGGCTTTGCACCACTTTGATTGGTTTACAAAGGGGAAGGTGCCTGTGCTGGAAGCAATGGAAAAAGATCAAAAAGTGAGATCACAGTTTAGAGGGGGTTCATCAGCTATAGTTTCAAATACTACAGAAAAACCGAAAGTAATTGCTGCAAAGCTGCAAGCACTTAGTCCTAAGTATAATTCAGTAATGAATCATATTCGGATACATCTTCCAGAGTTGTTCTCAAGTCTTGACAAGGTGGTCTTCCTCGATGATGACATTGTGGTACAAACTGATCTTTCACCATTGTGGGACATTGACATGAATGGAAAAAATATAAAATCAGACCTCAGTTTGTGGCAACTAGGAACATTGCCTCCTGGATTAATAGCATTCCATGGTCATGTCCACACTATTGATCCTTTCTGGCATATGTTGGGATTGGGATATCAGGAAAATACAAGTTTTGAAGATGCTCAGAGTGCTGGTGTCATTCATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTCCCCCATCTAAGGAAATTGTGGACTAAGTACGTTAACTTTTCAGATTACTTTATAAAGAGCTGTCACATTAGGGCATTGTGATTTTGATCATGAGAAAATGTGACCTTTTTTTTATGAGTGGAAGGAATGGTATTTGCATAAAGAGGAAGATGAAAATGAGAGGACTTCTTCAAAGCTTATACCCTTCCACCACTAGAAAGAAGTGACAACAATGATACGTCTACTTGGCAAGATGCACCCTTTTTTCAATTTTTGTTAAGTCTTCAGTTGAAATTCTTTTTCTCTTCCATCTGTATTGTAAGTATGAGTATTTTTAGATCATATACATAAGAAATGCAGTTCTTTTGGAAGACCAACATGCTAGTTAATTGATTAAGATGTATAAGATGAAGAAATAAAAGTTTTGAAGGAGACACTAAAGAAC 1672 0.3989 MLLQISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDSIDGENKCSSIVMYGILDQPLSKDEIKGRTDIPQTIGEFMTQMKEGGYDAKTFAIKLREMITFLEQRTREAKVQEYLYRHVASSSIPKQLHCLALRLANEHTNNAAARLQLPSAELVPALVDNNFFHFVLASDNVLAASVVAKSLVRNSLHPRKVVLHIITDRKTFYPMQSWFSLHSLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVSNTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFSSLDKVVFLDDDIVVQTDLSPLWDIDMNGKNIKSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQENTSFEDAQSAGVIHFNGRAKPWLDIAFPHLRKLWTKYVNFSDYFIKSCHIRAL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03739 442 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 187 349 IPR029044 -
Pste1g03739 442 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 88 348 IPR029993 GO:0047262
Pste1g03739 442 SUPERFAMILY Nucleotide-diphospho-sugar transferases 186 439 IPR029044 -
Pste1g03739 442 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 350 434 IPR029044 -
Pste1g03739 442 Pfam Glycosyl transferase family 8 153 349 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03739 Pste-Chr1 18287977 18291399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03739 348 441 Glycosyltransferase AT5G54690 84.043 6.88e-53 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03739 1 18287977 18291399 Pste1g03739 1 18287977 18291399 ECH
Pste3g02586 3 18767161 18770992 Pste1g03739 1 18287977 18291399 PCT