Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03681 GTATTTTCTGCTGTGGCTGCATCTGAGGGTATCCACCAAATAACTACAGGCAAACTGGTTTCCAGAGCAAGAACCAAGGGCGTGAAGGTGGTTGGTTATATGGAAGATGGGTGTGAATTCATTATAAAAAATGTGAGGCTAACTAATTACCCTTACAAGGCAGTTGATGGAACTTGCAACAAAGCAGCCACCCCAGTGGCTCAAATTAAAGTATATCAGAAAGTTCCTCCCAAAAGTGAGAAGGCACTCCACAAAGCTGTGGCTAACCAACCAGTGTCAGTTTCTATTGATGCAAATGATGCAGGTTTCATGTTTTACTTCAGTGGAGTTTACACTGGTGAATGTGGAACTGAGCTAGATCATGGTATTACTGCAGTTGGTTATGGCACAGCTAATGGAACAGACTATTGGTTGGTGAAGAACTCATGGGGCACACAATGGAGTGAGAAGGGGTATGTCAGGATGCAGAGAGGTATCGCTGCCAAGCATGGTTTATGTGGAATTGCCATGGATTCATCTTACCCAAAAATTAAATTCCCTAAGCAAAACTACATGCAGAAATTAAAAGTCTTCCCAACTCATCATCTTTATAAACCTTACCATACTGTGCCATCCACTTCTCATGTTTCTCTGACGAGCATGCCTCAGGCAACCTGCGAGACATTACATGGGAAGTCCACGCAGTTAGAACAAGGAACAGAACTAGAAGCCAGTGTTCATTTGGATGATTCCAAGAACCACCTTCAGAGATACAATAATGGTGTTATAATGAACAAATCATTATATGCTAGGCTGTATATAGAAATGGCTTTCATCAACCAAAAGCAGTACATGTTAGCCCTATTACTTCTTCTCAGAGTTGGAATTTCCCAAGTGATATCTCGCAAGCTGCATGAGACATCCATGCAAGAAAGACATGAACAATGGATGGCAGAGTATGGTAGAGTTTATGAGGATGCTTTAGAAAAGGAAAAACGCTTCCTGATATTCAAGGACAATGTGGAGTTCATAGAATCATTCAATGCCATTGGCAACAAACTTTACAAGCTTGGCGTTAATCACCCTGCTGACCTCACACTTGAGGAATTCAAGGCTTCCCGTTTTGGATTGAAGAGGCCCCGCGAGTTTAGAGTAACACCATTTAAGTATGAAAATACCACAGATATTCCTGCAGCCATAGACTGGAGGATAAAAGGAACTGTTACTCCCATCAAAGATCAAGGTCAATGTGGGAGTTGTTGGGCATTTTCAAGTGTGGCAGCAACGGAGGGTATACACCAAATAAGTAGTGGCAAACTAGTGTCCCTCTCAGAGCAAGAGTTAGTGGATTGCGACAGAAAAGGTAATGACGAAGGGTGCAATGGGGGTTACATGGAAGGTGGGTTTGAGTTCATTATAAAAAATGGTGGAATCAGCAGTGAGGCTAACTACACCTACATGGCAGTTGATGGGACTTGTGACAAAACAAAAGCAGCCTACCCTGTGGCTCAAATTAAAGGGTATGAGAAAGTTCCTCCCAATAGTGAGGAGGCACTAAAGAAAGCTGTGGCCAACCAACCTGTGTCAGTCTCCATTGATGCAAATAATAGAGCTTTCATGTTATATGCTAGTGGGATTTACACAGGAGAATGTGGAACTGACCTAGACCATGGTGTTACTGCAGTTGGTTATGACACAGTTAATGGAACTGAGTATTGGATAGTGAAGAATTCATGGGGCACGGAATGGGGTGAGGAAGGATACATAAGGATGCAGCGTGGTGTACCTGCCAAGCACGGTTTATGTGGAATTGCCTTGGATTCATCTTATCCAAATGCTTAA 1821 0.4278 VFSAVAASEGIHQITTGKLVSRARTKGVKVVGYMEDGCEFIIKNVRLTNYPYKAVDGTCNKAATPVAQIKVYQKVPPKSEKALHKAVANQPVSVSIDANDAGFMFYFSGVYTGECGTELDHGITAVGYGTANGTDYWLVKNSWGTQWSEKGYVRMQRGIAAKHGLCGIAMDSSYPKIKFPKQNYMQKLKVFPTHHLYKPYHTVPSTSHVSLTSMPQATCETLHGKSTQLEQGTELEASVHLDDSKNHLQRYNNGVIMNKSLYARLYIEMAFINQKQYMLALLLLLRVGISQVISRKLHETSMQERHEQWMAEYGRVYEDALEKEKRFLIFKDNVEFIESFNAIGNKLYKLGVNHPADLTLEEFKASRFGLKRPREFRVTPFKYENTTDIPAAIDWRIKGTVTPIKDQGQCGSCWAFSSVAATEGIHQISSGKLVSLSEQELVDCDRKGNDEGCNGGYMEGGFEFIIKNGGISSEANYTYMAVDGTCDKTKAAYPVAQIKGYEKVPPNSEEALKKAVANQPVSVSIDANNRAFMLYASGIYTGECGTDLDHGVTAVGYDTVNGTEYWIVKNSWGTEWGEEGYIRMQRGVPAKHGLCGIALDSSYPNA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03681 606 CDD Peptidase_C1A 2 175 IPR039417 -
Pste1g03681 606 SUPERFAMILY Cysteine proteinases 298 604 IPR038765 -
Pste1g03681 606 Gene3D Cysteine proteinases 1 178 - -
Pste1g03681 606 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 565 584 IPR025661 -
Pste1g03681 606 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 119 129 IPR025660 -
Pste1g03681 606 Pfam Papain family cysteine protease 389 604 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 Pfam Papain family cysteine protease 2 175 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 Gene3D Cysteine proteinases 289 605 - -
Pste1g03681 606 SMART Inhibitor_I29_2 306 363 IPR013201 -
Pste1g03681 606 CDD Peptidase_C1A 390 604 IPR039417 -
Pste1g03681 606 Pfam Cathepsin propeptide inhibitor domain (I29) 306 363 IPR013201 -
Pste1g03681 606 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 294 598 IPR013128 GO:0008234
Pste1g03681 606 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 407 418 IPR000169 -
Pste1g03681 606 PRINTS Papain cysteine protease (C1) family signature 550 560 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 PRINTS Papain cysteine protease (C1) family signature 407 422 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 PRINTS Papain cysteine protease (C1) family signature 565 571 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 SMART pept_c1 1 176 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 SMART pept_c1 389 605 IPR000668 GO:0006508|GO:0008234
Pste1g03681 606 FunFam Senescence-specific cysteine protease SAG39 288 606 - -
Pste1g03681 606 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 548 558 IPR025660 -
Pste1g03681 606 SUPERFAMILY Cysteine proteinases 2 175 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03681 Pste-Chr1 17785271 17796526 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03681 1 17785271 17796526 Pste1g03681 1 17785271 17796526 ECH