Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03676 CTCTGATCACAATATGAGTTCATTTAGCAAAAACCACTATATCTTCTTTCTGGTCCTCGTTCTTACTGTGTGCACATCTCACGTAATGTCTCGCAGGTTGTCTGAGGCCTGCACATCTGAGACACATGAAAAGTGGATGGCACAATATGGTAAGATTTACAAGGATGATGCTGAGAAAGAAAAACGTTTCCAAATATTTAAGCACAATGTGCAGTTCATTGAGTCATTCAATGCAGCAGGGGACAAACCTTTCAACCTTAGCATTAACCAATTTGCAGACCTACATAATGAAGAATTTAAGGCTTTACTAATTAATATTCAGAAAAATGAAAATAGGGTAGGGACAGTAACAGAAACATCATTTAGGTATGACAGTGTTACTGACATTCCTGCTACAATGGATTGGAGGAAACGAGGCAGTTGCTGGGCATTTTCAACTGTGGCTGCTATCGAGGGTATCCACCAGATTACTACAGGAAAATTGGTGTCTCTCTCTGAGCAAGAACTAGTTGATTGTGTAAAAGGTGAGAGCGATGGGTGCAATGGTGGTAACAAGGAAGAAGCCTTTGAATTTGTGGCCAAGAAAGGAGTAGCAAGTGAAACATACTATCCCTACAAAGGAAATAATAAGATTTGTAAGGTTAAGAAGGAAAGTCATGGTGTAGCTCGGATTAAAGGGTATGAAAATGTTCCTATTAATAATGAAAAAGCACTCCTGAAAGCAGTGGCACATCAACCAGTGTCAGTTTATATTGATGCTGGAGAATCTGCTTTCCAATTTTACTCAAGTGGGATTTTTACAGGAAAGTGTGGAACTTATCTAAACCATGCTGTTGCAGTAGTTGGTTATGGAAAAGTTCGTGGTGGCACTAAGTATTGGCTAGTAAAGAATTCATGGAGCACTGAATGGGGTGAGAAAGGGTACATAAGAATGAAAAGAGATATACGTGCTAAGGAAGCAACACTTGCATTGACTTTGAGTATGCATCGTACAAAACTTCGGGAGTATATTGGGTGCATGAAATCTGGTCTTGTCCTTGTTGAAAAGTACTACATAATTAATTTATATCCAGTTCCTAAGTCTTACCACGGGGGAGTTAAATACCATGAACCAGAACACTGGAAGTCTGGAGAGTCAGGAAACAAGTACTTCCGTCACGCTACAGAACAAATATATGCCATTTCACAAGATTTGGCTTCATATATATCAGTAAATCAG 1219 0.3921 MSSFSKNHYIFFLVLVLTVCTSHVMSRRLSEACTSETHEKWMAQYGKIYKDDAEKEKRFQIFKHNVQFIESFNAAGDKPFNLSINQFADLHNEEFKALLINIQKNENRVGTVTETSFRYDSVTDIPATMDWRKRGSCWAFSTVAAIEGIHQITTGKLVSLSEQELVDCVKGESDGCNGGNKEEAFEFVAKKGVASETYYPYKGNNKICKVKKESHGVARIKGYENVPINNEKALLKAVAHQPVSVYIDAGESAFQFYSSGIFTGKCGTYLNHAVAVVGYGKVRGGTKYWLVKNSWSTEWGEKGYIRMKRDIRAKEATLALTLSMHRTKLREYIGCMKSGLVLVEKYYIINLYPVPKSYHGGVKYHEPEHWKSGESGNKYFRHATEQIYAISQDLASYISVNQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03676 402 SMART pept_c1 125 320 IPR000668 GO:0006508|GO:0008234
Pste1g03676 402 SUPERFAMILY Cysteine proteinases 35 311 IPR038765 -
Pste1g03676 402 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 324 IPR013128 GO:0008234
Pste1g03676 402 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 270 280 IPR025660 -
Pste1g03676 402 FunFam Senescence-specific cysteine protease SAG39 19 326 - -
Pste1g03676 402 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Pste1g03676 402 Pfam Papain family cysteine protease 127 312 IPR000668 GO:0006508|GO:0008234
Pste1g03676 402 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 288 307 IPR025661 -
Pste1g03676 402 CDD Peptidase_C1A 126 310 IPR039417 -
Pste1g03676 402 SMART Inhibitor_I29_2 38 95 IPR013201 -
Pste1g03676 402 Gene3D Cysteine proteinases 16 320 - -
Pste1g03676 402 PRINTS Papain cysteine protease (C1) family signature 131 146 IPR000668 GO:0006508|GO:0008234
Pste1g03676 402 PRINTS Papain cysteine protease (C1) family signature 272 282 IPR000668 GO:0006508|GO:0008234
Pste1g03676 402 PRINTS Papain cysteine protease (C1) family signature 288 294 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03676 Pste-Chr1 17707984 17715519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03676 270 402 Glycosyltransferase AT2G32430 48.120 7.50e-29 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03676 1 17707984 17715519 Pste1g03676 1 17707984 17715519 ECH