Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03563 TTTCTACGCGCGCTCAACTTTTCACAAACGCAACACCCGCGCGACACAAAAACAAAACAGCCATTTAACCCACCGATCAAGCCACCGAGGGAGGGAGAAACCCTAATAGTGATCGCGAACCCGTTGCCGCTTCGATCGATTCTTCAATCACCGCTTCCGCACCGCATGGCGAGTGAATCCTCTGCCAACCGTCCTTCTACTCCTTCGTCCAATTCCACGGAATCCTTCATTGGTTGCTTCATAAGCTTGATTTCCAAGTGCGATATTCGCTACGAGGGCGTTCTTTATCTCCTTAACGTTCAAGATTCCACTATCGGCTTGGAGAACGTTAGATCCTATGGAACAGAAGGGAGAAGAAAAGATGGCCCACAAGTTCCTCCAAGTGATAAGATTTATGAATACATTCTTTTCCGTGGAAATGATATTAAGAATTTGCAGATCAAGTCAACCCCCACATCTTCCAAATCAGAAGAGCAGATTTTTAATGATCCAGCAATTATTCAGTCACAATATTCTGGGTTGCTAAATTCTTCAGTGGCCTTGGTTGGTGGTGGGAGAAGTTTGACAGAATCAATTCAAACGCAAGATGTCCCTGCTATATCCAGTAAAGCCTTTCCTACTGGGTTGCCATCTCATCAGTCTGTAACTCTGCTAGGACCTTCTAATTCATCTACTGCTACTCAAGTTGCTAGTCATCCTTCTTTTTCTACAGCAATGTATTGGCAACGACCTAGTGGGATATCTAGCAGTGGTTCTCTTTCTCTGGTACAATCTAGCTCTCTTCACACTCCACCACTGGCAGCATCCTTGGGTGTGCAGAATCAGAGGCAAAATGGAGAAGCTCAGGTGCCTACTAAAGGGGGATGGACAGGTTTATCAAATTATGGTTTACCTGTATCTTCTGCCATGACTTCTTCTCTTGTAAATCTAACTCAGTCACCTTCTCTTACCTCTTTAAAAATTTCTGATTCTCTTGATCTTCCTTCCTTTTTGTCTACTATGACACCTGTGCCATATTCTGCATCCATGACTTTTGATGGATCAAACATGCCTCAGTTTTCTTCACCTCTCCAAGACATAAATTCTAACGAAGCTCAAATATCTAGAAACATATGTCCTGACCCAAGGCCAATTCATCCTCGACATCCTGTCCATCATTCTTCTTCTTTATCTGTAAATTCTACTTCAGGTCCCTTGCTAACAGCACCATCTTTATTAACACCAGATCAATTTGCACATCCTAGAGAACAATTATTTTCTTTAACACATAATTTGAACCCTAATAAGAAGGACATGGGTTCTTTGATTCTAACACCCTCTGGTTCCTCTGCGTTAATGCCTTCACCAACGTCTCAGGCACCACTGCTTCCACTACCAATTTCAATGCAAAAGGCCATGAATGAAAAGTTCAAAAAGGATGAAGTATGGGGTTCTCTCGGAAAGGCAACCACAACAATGGAAGGAGTGGAGGATAATGCTTCTCTCAGTTTGGGTGACAAAGAATGTCATGGGATGATACCAAACCCTCAGTCTGCATACAAGAAAGATGACTTTTTTGACACAATTTCTTGTAACTCTTTGACTCGTGGATCAAGGAATGGACAAAATCGTTTCTCTGAGAGAATGAAACTGGATACTGAGACATTTGGCAATTTCCAGCAGAGGCCTAATTTTATTCATGGTGGTTATGGTGCTGGAAGGGATAACATGCTTATGGTACTTGCGTGCCTAGATGCTGGAATGTCAAACTTACAAATGACCGCCATGTTCATGTTTTTTTTTGGGGTTCATGAGCTGGTGTTTGACATTTTTTAA 1815 0.4242 FLRALNFSQTQHPRDTKTKQPFNPPIKPPREGETLIVIANPLPLRSILQSPLPHRMASESSANRPSTPSSNSTESFIGCFISLISKCDIRYEGVLYLLNVQDSTIGLENVRSYGTEGRRKDGPQVPPSDKIYEYILFRGNDIKNLQIKSTPTSSKSEEQIFNDPAIIQSQYSGLLNSSVALVGGGRSLTESIQTQDVPAISSKAFPTGLPSHQSVTLLGPSNSSTATQVASHPSFSTAMYWQRPSGISSSGSLSLVQSSSLHTPPLAASLGVQNQRQNGEAQVPTKGGWTGLSNYGLPVSSAMTSSLVNLTQSPSLTSLKISDSLDLPSFLSTMTPVPYSASMTFDGSNMPQFSSPLQDINSNEAQISRNICPDPRPIHPRHPVHHSSSLSVNSTSGPLLTAPSLLTPDQFAHPREQLFSLTHNLNPNKKDMGSLILTPSGSSALMPSPTSQAPLLPLPISMQKAMNEKFKKDEVWGSLGKATTTMEGVEDNASLSLGDKECHGMIPNPQSAYKKDDFFDTISCNSLTRGSRNGQNRFSERMKLDTETFGNFQQRPNFIHGGYGAGRDNMLMVLACLDAGMSNLQMTAMFMFFFGVHELVFDIF 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03563 604 SUPERFAMILY Sm-like ribonucleoproteins 75 151 IPR010920 -
Pste1g03563 604 Gene3D - 67 152 - -
Pste1g03563 604 ProSiteProfiles FFD box profile. 511 526 IPR025761 -
Pste1g03563 604 SMART FDF_2 460 553 IPR019050 -
Pste1g03563 604 MobiDBLite consensus disorder prediction 53 72 - -
Pste1g03563 604 CDD LSm14_N 73 147 IPR025609 -
Pste1g03563 604 SMART LSM14_2 70 171 IPR025609 -
Pste1g03563 604 Pfam Scd6-like Sm domain 76 149 IPR025609 -
Pste1g03563 604 Pfam FDF domain 465 551 IPR019050 -
Pste1g03563 604 MobiDBLite consensus disorder prediction 1 18 - -
Pste1g03563 604 ProSiteProfiles TFG box profile. 533 553 IPR025768 -
Pste1g03563 604 ProSiteProfiles Sm domain profile. 68 151 IPR047575 GO:0003723
Pste1g03563 604 MobiDBLite consensus disorder prediction 1 30 - -
Pste1g03563 604 PANTHER SCD6 PROTEIN-RELATED 71 462 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03563 1 16875816 16889715 Pste1g03563 1 16875816 16889715 ECH