Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03529 AATGGAACCGCGCATAACTCCTGGAAGGAACCCAAAAACCTCAGCCCTGTCATCTCTCACCCTCCTTCGGTTTTTTTCTCGGAGCGATCATGGCACCATCTAGGGTTTTCGGTGCAATCGCCGGCAGGGCCTTCATGGCCGCGGCGGCGAAGAGCGCGGCGAAGAAGAAGCCTGCTCCTTTCGGCGGAGCCCTGCAAAACCCCAGCGAAGAAGACCGTGACAGTGAAGAAGACTGTGACGCCTAGAGTCAACACTGGCATACAGAAGGTGGTTCCGGTGTCTTCCGAGCTCGGCAACTTCATCGGCGCTTCTGAAGTGTCGCGAACCGAAGCCATAAAAAAAGTCTGGACTTACATCAAGCTGCAGAATCTTCAGAATCCTTCTAATAAGAAGGAGGTCTTCTGTGACGAAAAGCTGAAGACCATCTTTGATGGGAAAGATAAAGTTGGGTTCATAGAGATTGCTAAATTGCTGTCTAACCATTTTGTGAAATCAGGAAATTTTATGGGTCATTCTGTCTTCAAGTACATCGTCAAGAAACATGGAAATTTGTGGTTGACAGACTTGAGGGGTTTGAAAGTGGTGTTATTTTGGCTCACTACCCGCATGCACATTGTTAGGGCTTTAGAATATATGCGTGATCTTTCCAAACCATTTGTTCAACCAGTTATTAGAAGCTTTCATTCAGCCATTCACACTCCCCCCCAATTCCGTACCCTCCAAGACTATTCTTCTCTCTTTCTCGCCACTCCCCTCAATTCCCTTGTCCACTTAGACAGTAAACTCCAACACTCATTCTTCATGGGTCTTATCCCTAACCATTCACCACAAATCCATCCAAATCAATTTCAATTCCAATTCAATTCTTCCCTAACCAACCGACCTTGCCATGCTATCCAAGATGTTGTCGATCCCACTGCCATTTCTTCCACCCACTGTTGCCTATGGGCCAAGGATCGTTCCGAGGATTGG 972 0.4733 NGTAHNSWKEPKNLSPVISHPPSVFFSERSWHHLGFSVQSPAGPSWPRRRRARRRRSLLLSAEPCKTPAKKTVTVKKTVTPRVNTGIQKVVPVSSELGNFIGASEVSRTEAIKKVWTYIKLQNLQNPSNKKEVFCDEKLKTIFDGKDKVGFIEIAKLLSNHFVKSGNFMGHSVFKYIVKKHGNLWLTDLRGLKVVLFWLTTRMHIVRALEYMRDLSKPFVQPVIRSFHSAIHTPPQFRTLQDYSSLFLATPLNSLVHLDSKLQHSFFMGLIPNHSPQIHPNQFQFQFNSSLTNRPCHAIQDVVDPTAISSTHCCLWAKDRSEDW 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03529 324 Gene3D SWIB/MDM2 domain 73 168 IPR036885 -
Pste1g03529 324 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 70 164 - -
Pste1g03529 324 SUPERFAMILY SWIB/MDM2 domain 82 164 IPR036885 -
Pste1g03529 324 ProSiteProfiles SWIB/MDM2 domain profile. 86 164 IPR003121 -
Pste1g03529 324 SMART swib_2 87 167 IPR019835 -
Pste1g03529 324 CDD SWIB-MDM2_like 91 162 - -
Pste1g03529 324 Pfam SWIB/MDM2 domain 91 162 IPR003121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03529 Pste-Chr1 16641809 16644558 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Pste1g03529 SWIB 2.9e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03529 1 16641809 16644558 Pste1g03529 1 16641809 16644558 ECH