Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03494 GTTTGACATATTAATTGGAAGAAGAAAAGACAATAGAGAAATGGAGGAGAGCATTCCAGTGATTGATGTGGGGAAGATGAATGGTGAGGAAGAGGAACTGAAGAAGCTAAGAGAGGCATGTGAAAGATGGGGTTGTTTCAGGATCATCAATCACACTATTCCCGCAACCCTCATGGCTGAGATGAAGAGTGTGGTTGAAGCTCTGCATGATCTTCCTGTAGAGATCAAAGAACGCAACACACACGTGCTTGCTGGTAGTGGTTACGTGGGACCAACTGAATTCTCCCCTTTCTTTGAATCCTTGGGCATCTATGACATGTGTTCCTCACAAGCTATGGACAATTTCTGTTCTCAACTTCAGGCCTCTCCACACCAGAGGCAAATAATGGAGGCATACGGCAAAGCGGTTCATGATTTGGCAATGATGATGGGAAAGAAGATTTGTGAATCTCTTGGCATAGTAGTTGCTGATTTCGAGGAGTACTGGATATGTGAGCTTAGATTGAATAAAAATGATTTTACCCCAGAAAGTGTTGGATCCACTGGAGTTGGAATACACACAGATTCAGCCTTCGTAACCATTCTCAAAGATGACGACAATGTTGGTGGTCTTGAAGTCATCAACCCTTCTGGCTCATTTGTTCCAACCCCTCATTTTCCAGGGACCTTCCTTGTCATTCTTGGAGACATTGCCCGTGTTTGGAGCAATGGAAGGTTTCGTAATTTGACCCACCGTGTGCTGTGCAAGGAAGGGAACAAACGTTTTTCATTTGTCACATTTTTGTTACCACAAAGGAATTCCAAAGTTGAGCCTCCCTCGGAATTAGTGGACCATGATCACCCACGTCTATACCCACCTTTTCTTTTTGATGATTACAGGAAGCTCAGATTTAGCAATAATCTGTTCAATGCTCATGCCCTGGAGTTATTACGCTTCGCCAACTCTTAGGAAGGGGAAATCGGTCTCTTTGTTTTCCAAATAATACTATGCATGAACTCTGTCAAAACTAATTCCCCGCTGAAGCAGTATATTTTATGTTAAGTCACCCAATCTATCCAATAAAATCAAATATAATACTTACGTTAATTTGCAATACAATTGTTACTATAATTGTTAAAACAGAATCCATGTTCGCTACATGATCCTCACATTTCATTATAATAATAAAGTCCTT 1175 0.4119 MEESIPVIDVGKMNGEEEELKKLREACERWGCFRIINHTIPATLMAEMKSVVEALHDLPVEIKERNTHVLAGSGYVGPTEFSPFFESLGIYDMCSSQAMDNFCSQLQASPHQRQIMEAYGKAVHDLAMMMGKKICESLGIVVADFEEYWICELRLNKNDFTPESVGSTGVGIHTDSAFVTILKDDDNVGGLEVINPSGSFVPTPHFPGTFLVILGDIARVWSNGRFRNLTHRVLCKEGNKRFSFVTFLLPQRNSKVEPPSELVDHDHPRLYPPFLFDDYRKLRFSNNLFNAHALELLRFANS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03494 302 Gene3D - 2 297 IPR027443 -
Pste1g03494 302 Pfam 2OG-Fe(II) oxygenase superfamily 154 248 IPR044861 -
Pste1g03494 302 FunFam 2-oxoglutarate-dependent dioxygenase DAO 3 296 - -
Pste1g03494 302 SUPERFAMILY Clavaminate synthase-like 4 287 - -
Pste1g03494 302 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 76 IPR026992 -
Pste1g03494 302 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 151 250 IPR005123 -
Pste1g03494 302 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03494 Pste-Chr1 16337731 16340099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03494 5 299 Glycosyltransferase AT5G59530 25.566 2.07e-19 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03494 1 16337731 16340099 Pste1g03494 1 16337731 16340099 ECH