Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03420 TTTATCTTTAAAACACAGAGCCAATCAAGTGATCAACTCTTTCACATTGCGGGGGACTGAAAGAGAGAAGAAAAAATGATGGAGGTTGTGATTGTTGCGGTTTCTGCTACACTTGGGAATCTTCTTATGGGATGGGATAGTTCAACTATTGCAGCGGGTATGACCTACATCAAGAAGGAGTTCGTGTTGGATGCCACACTCGAAGGGCTAATCGTGTCCATGTCGTTTCTAACCGGTACTATTGTCACAATATTTTCTGGGACAGTGTCTGATTTGGTTGGAAGACGTCCTATGCTGATAACATCTTCTATTATGTTCATCTTTAGCGGTTTGGTAATGTTGTGGGCTCCTAATGTTGTTATTGTTCTGCTAGCGAGGATAATTGATGGGGTTGCCATTGCTCTTGCTGTTACTCTTACTCCTCTCTACATATCTGAGGTAGCACCGGCTGATATTAGAGGGCAACTGAACACCCTTACTCAGTTTGCTTGCTCTGGTGGAATGTTTTTGGCTTATGTCTTGGTGTTCTCAATGTCTTTGGCTGATTCACCAAGTTGGAGACTCATGCTTGGAGTTATTTTTATTCCTGCTGTTGCTTATTTTTTACTGGCCGTGTTTTACTTGCCTGAGTCTCCTAGGTGGCTTGTAAGCAAAGGCCAGTTACAAGAGGCTGAAAGAGTTCTGAAAAGGCTTCGTGGCACTGAAGATGTTTCAGGGGAATTGGCATTGCTGGCGGAGGGTCTCAGTCCCGGAGGCGAAGCCACTTCCATAGAAGAGTATGTAGTTGCCCCAGCTACTGAGCTTCTTGCTAATCAGGAAGCAGGGAAAGATTATATAAAGTTATATGGTCCTAATGAGGAAGTTACAATGGTTGCTCAACCAGTGAATGGACAGGATAGCTTGATTTCCCGTAGTATGTTGTCTCAGCAAGGAAGCTTTGGAACTCTGACTGGTGGTGGTCTTAAGGATCCTATTGTCTCTCTCTTTGGAAGTTTGCATGAGAATACTCTTCCGGAGGGTGGAGGTTCACGCAGTATGCTAGTTCATAACGCCAACAGTATCTTTAGCATTGGAGAGCCGGAGTCCAGTCCCTTCGGTACCAGTGACAACCTGCACGCACCACTAATGTCATTTCAAGGGGGTGCTGGGGAGAGAGATAGGGCTTATGGTTCCAAGGATATGTTGGGTATGAGGAGCAATAGCAGCCTGAGAAGTAATACTAGTTTGGTTCATGGGAATGCTGTTGAAACACCTAGAAATACAAACATTGGGGGAGGTTGGCAGTTGGTTTATAAAGCAGCTGATGGTATTGGAAGTGGGAAAAGAGAAGGACTCCAAAGGGTTTATTTGCATGCAGATACTGCTGCAGTGTCTCATGATCACAATGTTTCATTTGTTTCAACTTCTGGCTATGACATACCGATAGAGGGTGGTGAAGTGTATCAAGCTTCTGCTCTTGTCAGCCAGTCAGTTCTAGGTACTCATGATATGTTGCATCTGCCAGAAGTTGCTGCAAAAGGCCCAAAATGGAGAGCTCTGCTAGAACCAGGAGTCAAGCGTGCATTAATCGTTGGAATAGGACTCCAGATTCTTCAGCAGGCTGCTGGCATAAATGGATTTCTCTACTATGCTCCCCAAATTCTTGAACAGGCTGGAATAGGGGCTCTTTTATCAAATTTGGGCCTTAGTTCAGCTTCTGCTTCTTTTCTTGTAAATATCATCACAACATTCTGTATGCTTCCTTGTATAGCGCTTGCCATAAGACTCATGGATATTTCTGGCAGGAGGTCAATCATGCTGTACACAGTACCCATTTTGATAGTTTGTCTCCTGATACTAGTGGTCAAGCAGTTCTTTCAAATGAGTTCTGTCATCGATGCTGCAATCACTGCTGTTAGTGTTGTGGTTTATGAGAGCGTCTTCTGCATGGGCTTTGGTGTTATTCCCAACATCATATGTGCTGAAATCTTCCCAACAAGTGTTCGTGGAATCTGCATTTCTCTGACTTCTCTTACATATTGGGGTTGTACCTTGATTGTCACTTTGACATTCCCCTACTTGCTGCAGCTTCTCGGTCTCACTGGTGTCTTTGGATTATTTGTTGTTGGCTGCATCATTTCGTGGATATTTGTCTACTTGAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAAGTTATTATTGAATTTTTTGCTATTGGTGCAAAGCCTGGTACTGATCCTGCCTCAATAGAAATCAAAGGCTGACACCTGGGGAATACTGATATGGTCAATATCATAAGAAGCAGCAGCATAGATCATCAACAAGTTTACAAGTTTAGTTGGTTTTAATTCCTACTAAAATGGGTTGAGAAGATTCGGTGGAAGATTGAAACTATTTGGCGTTAGGACATGTGCCAGCAGGGACTTCACTTTTTGAGCATTTAGGAGAAAATGAGTATATTCTAGTGATTTATTTATACATATTATGATTAATATTTAGAGTATTCCTTGTATTCTTTTAACTTTTCATTCTTTGGCATTTGCCATTTGGTTTTACGCCTTGCAACAGGTGATGTGCTCTAGTGATATTTAAGGTCTGAAATGTCATCATTA 2592 0.4252 MMEVVIVAVSATLGNLLMGWDSSTIAAGMTYIKKEFVLDATLEGLIVSMSFLTGTIVTIFSGTVSDLVGRRPMLITSSIMFIFSGLVMLWAPNVVIVLLARIIDGVAIALAVTLTPLYISEVAPADIRGQLNTLTQFACSGGMFLAYVLVFSMSLADSPSWRLMLGVIFIPAVAYFLLAVFYLPESPRWLVSKGQLQEAERVLKRLRGTEDVSGELALLAEGLSPGGEATSIEEYVVAPATELLANQEAGKDYIKLYGPNEEVTMVAQPVNGQDSLISRSMLSQQGSFGTLTGGGLKDPIVSLFGSLHENTLPEGGGSRSMLVHNANSIFSIGEPESSPFGTSDNLHAPLMSFQGGAGERDRAYGSKDMLGMRSNSSLRSNTSLVHGNAVETPRNTNIGGGWQLVYKAADGIGSGKREGLQRVYLHADTAAVSHDHNVSFVSTSGYDIPIEGGEVYQASALVSQSVLGTHDMLHLPEVAAKGPKWRALLEPGVKRALIVGIGLQILQQAAGINGFLYYAPQILEQAGIGALLSNLGLSSASASFLVNIITTFCMLPCIALAIRLMDISGRRSIMLYTVPILIVCLLILVVKQFFQMSSVIDAAITAVSVVVYESVFCMGFGVIPNIICAEIFPTSVRGICISLTSLTYWGCTLIVTLTFPYLLQLLGLTGVFGLFVVGCIISWIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPASIEIKG 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03420 722 Gene3D MFS general substrate transporter like domains 464 707 IPR036259 -
Pste1g03420 722 Pfam Sugar (and other) transporter 482 702 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 PRINTS Sugar transporter signature 606 627 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 PRINTS Sugar transporter signature 507 517 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 PRINTS Sugar transporter signature 98 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 PRINTS Sugar transporter signature 629 641 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 SUPERFAMILY MFS general substrate transporter 7 699 IPR036259 -
Pste1g03420 722 FunFam Monosaccharide-sensing protein 3 464 707 - -
Pste1g03420 722 ProSitePatterns Sugar transport proteins signature 1. 61 78 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pste1g03420 722 Gene3D MFS general substrate transporter like domains 1 245 IPR036259 -
Pste1g03420 722 FunFam Monosaccharide-sensing protein 3 2 247 - -
Pste1g03420 722 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 694 IPR020846 GO:0022857
Pste1g03420 722 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03420 Pste-Chr1 15884384 15888199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03420 49 717 Organic Solute Cotransporters AT3G51490 52.579 0.0 666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03420 1 15884384 15888199 Pste1g03420 1 15884384 15888199 ECH
Pste7g02018 7 18544048 18548895 Pste1g03420 1 15884384 15888199 ECH
Pste1g03420 1 15884384 15888199 Pste7g02018 7 18544048 18548895 PCT