Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03358 AAAAAAATAAAAATATGGTTCCTCCTTAGACATTTGGTGATCCCATCATAACATGTAGGCAAACGAAATCCAAGCATTCACGGCACAGACGGCAATTAACCTACACGCGCCATCGTCGCCATGAGCGAATCCCAAGAACCCTTCTCTTACCCTCCCATTGACCCCATCAACTTCGATCTCATCATCGTCGGCACCGCCCTCTCCGAATCCGTCATCGCCGCCGCCGCATCCGCCGTCGGCAAAACCATCCTCCACCTCGACCCCAACTCCTTCTACGGCAGCCACTTCGCTTCTCTCTCTCTTCACGACCTCTCTTCCTACCTCACTTCCCCTCGCTCTCCCCCCGCCGCCGCCTCCGCCTCTACCGACTCCGACGACGTCGTTATCGACCTCGTTCACCAACACATCTGCTCCGACGCCGAAATCGCATCCTACGATGAATCTGCGTTTCTCGACGAAAATTCGCGAAAATTCAGCATCGATTTGGGGGGTCCGAGGGCGCTGTTCAGCGCTGACAAGACGATCGATCTGTTGCTGAAATCCGGCGCGGCGCAGTATTTGGAGTTCAAAGGAATCGATGCAAGCTTCGTTTTTGAAGCGAACGAGGGTTTGGCGAACGTGCCGGATTCTCGAGGAGCGATTTTCAGAGACAAGAAGCTTTCGCTGAGGGAGAAGAACCAGTTGATGAGGTTCTTCAAGCTGGTCCAGCAGCACTTGGATGTTACTCAGGAGGAGAAGATTTCTGAGGAAGATATGGATATTCCGTTTGTTAGTTTCTTGGAGAAAATGAAGCTGCCGCCTAAGATTAAATCGATTCTGTTGTATGCTATAGCCATGGTAGATTATGATCAAGACAATAGCGAGATTTGTAAAGATTTACTTAAAACAAAAGATGGGATAGATTGTTTAGCTCAATACAGCTCATCTGTTGGAAGGTTTCCCAATGCTCCTGGGGCTTTGCTTTATCCTATTTATGGGGAAGGAGAATTACCACAAGCTTTTTGTCGTCGGGCTGCTGTCAAAGGCTGCATTTATGTTTTAAGAATGCCAGTTGTTTCTCTGCTTATGGATAAGGTTACTGGGCTTTATAAAGGCATTAGATTAGTTTCAGGTCAGGATTTATATAGCCATCAACTAATCCTGGACCCATCATTCACAATTCCATCACCGTTGACTTTGTCTGCAAGTGATTTTCCCAGTGAAAGGCTCCAAATGTTGAGTCAGAGAGATATTAAAGGATTGGTAGCTAGGGGAATATGCATCACAAAGACTTCAATAAAGCCAGATGTATCAAATTGCTCAGTGGTGTATCCTCCTAGATCTTTGTATCCTGAACAGGTGACATCAATCAAAGCTCTTCAGATAGGATCAAATCTTGCTGTTTGTCCAGCAGGAACCTTTATTTTATACTTTTCCACTTTGTGCAATGATGCTGATGAAGGAAAGAAGCTACTAAAAGCAGCCATGAATGCTCTTCTTACACTGCCTGTATCTGGAAACTCTGAAAGTATTTTGAGTGTTCAAAGTGATAGTGAAGATACAAAACCCATTGTGATCTGGAGTGCATTTTATATTCAGAAGTTAATTACGAGTAAATTTGAATTTATCAGCTCCACTCCTACACCGGATGGAAATCTGAACTACAATGACCTTTTGGATGCGGCTCAGAAGAAACCTTATTTTTGGACTTGTCAGTTTTGTAATTTTGTTAATGAAAAGTTAGGAAACGGATTGGGAAAATATTTTTGCACTCGAGCATTTGCTTTGCTATTTGGCCAGATGTACCCTAATGAAGAATTCTTTCCAAAGGCAACACCACCCGACGATCCAACAGATGAGGATGATGATAGTGGGTTGACTCTGGATAGCTAAACAACATCTAACTGATTGAGCATTTAATGTCAGAACTGCAGGAGAAAGGAAGTTGTGAAAGATATGTACATGCCCCAAAGAATCCAAGATGTGGGTTAAAATTGTGAATTATGGAGGTAGAAAAGGTTACAGTTGCTAGTTTATAAGTTAAATGAAGACAAAACAGGTCCTCAAGGCAGGGAAGTAGTAGTTACTGATTCTTGAAATTTTTGTCAAGTACACATACGGATTTGGTGCTCAAGGTACTCTTGCGGCGTTTGTTGGACAAAGTTACCACCTGTTTTAATATTGTGGAACATTGAAAAGTTTCTGGGGGCCGAAGTACAGCGCTTACGTTCGTGTATCTTTTATCTGCAATTTGTATTTTGAAAACAATGATTGTATAATGTGTATGAGTTAGAACTAGTTTGGATTTGTTGCA 2293 0.4317 MSESQEPFSYPPIDPINFDLIIVGTALSESVIAAAASAVGKTILHLDPNSFYGSHFASLSLHDLSSYLTSPRSPPAAASASTDSDDVVIDLVHQHICSDAEIASYDESAFLDENSRKFSIDLGGPRALFSADKTIDLLLKSGAAQYLEFKGIDASFVFEANEGLANVPDSRGAIFRDKKLSLREKNQLMRFFKLVQQHLDVTQEEKISEEDMDIPFVSFLEKMKLPPKIKSILLYAIAMVDYDQDNSEICKDLLKTKDGIDCLAQYSSSVGRFPNAPGALLYPIYGEGELPQAFCRRAAVKGCIYVLRMPVVSLLMDKVTGLYKGIRLVSGQDLYSHQLILDPSFTIPSPLTLSASDFPSERLQMLSQRDIKGLVARGICITKTSIKPDVSNCSVVYPPRSLYPEQVTSIKALQIGSNLAVCPAGTFILYFSTLCNDADEGKKLLKAAMNALLTLPVSGNSESILSVQSDSEDTKPIVIWSAFYIQKLITSKFEFISSTPTPDGNLNYNDLLDAAQKKPYFWTCQFCNFVNEKLGNGLGKYFCTRAFALLFGQMYPNEEFFPKATPPDDPTDEDDDSGLTLDS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03358 583 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 95 488 - -
Pste1g03358 583 PANTHER RAB GDP-DISSOCIATION INHIBITOR 14 517 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 Gene3D - 15 517 IPR036188 -
Pste1g03358 583 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 167 279 - -
Pste1g03358 583 PIRSF Rab_ger_ger_transf_A_euk 76 534 IPR001738 GO:0005968|GO:0006886|GO:0018344
Pste1g03358 583 PIRSF Rab_ger_ger_transf_A_euk 1 107 IPR001738 GO:0005968|GO:0006886|GO:0018344
Pste1g03358 583 PIRSF Rab_ger_ger_transf_A_euk 534 582 IPR001738 GO:0005968|GO:0006886|GO:0018344
Pste1g03358 583 FunFam Rab proteins geranylgeranyltransferase component 167 279 - -
Pste1g03358 583 SUPERFAMILY FAD-linked reductases, C-terminal domain 372 489 - -
Pste1g03358 583 SUPERFAMILY FAD/NAD(P)-binding domain 15 348 IPR036188 -
Pste1g03358 583 FunFam Rab proteins geranylgeranyltransferase component A 14 92 - -
Pste1g03358 583 PRINTS Rab GDI/REP protein family signature 37 54 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 PRINTS Rab GDI/REP protein family signature 134 150 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 PRINTS Rab GDI/REP protein family signature 286 307 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 PRINTS Rab GDI/REP protein family signature 19 37 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 PRINTS Rab GDI/REP protein family signature 184 199 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 MobiDBLite consensus disorder prediction 569 583 - -
Pste1g03358 583 Pfam GDP dissociation inhibitor 114 452 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 Pfam GDP dissociation inhibitor 17 101 IPR018203 GO:0005092|GO:0007264
Pste1g03358 583 MobiDBLite consensus disorder prediction 560 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03358 Pste-Chr1 15456207 15460764 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03358 1 15456207 15460764 Pste1g03358 1 15456207 15460764 ECH