Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03297 CTCGCAGCGCTTTTTACCTTTCCATGGCTTCTGGAATAGCATAGACCATAGAGCATAGTCACATCACATCACAGCAAAGCAGCCGAAAGCTCGAAACCCTAGCAAGCCACCGTCCATGGCGACGAAACGATCCGCGCCGTTCCTAAAGCACTTCTTCAGCCGCCTGAACCCTTCCCGCTCCGTCACGTACATGCCACGGCCGGGCGATGGCACCCCGCGCGGCGTGACCCTCATCCCTGGCGATGGAATCGGGCCGCTGGTGACCGGCGCGGTGGAGCAGGTGATGGAGGCGATGCACGCGCCGGTGTACTTCGAGAAGTACGAGGTGCACGGCGACATGAAGGCGGTGCCGTCGGAGGTGGTTGAATCGGTGAGGAAGAACAAGGTTTGTCTGAAGGGCGGTTTGGCGACGCCGATGGGCGGTGGTGTGAGCTCTCTGAACGTGCAGCTTAGGAAGGAGCTCGATCTCTACGCTTCGCTCGTTAACTGCTTCAACCTCCCTGGCCTTCCCACTCGCCACGAGAACGTTGACATCGTCGTTATCAGGGAGAACACCGAGGGAGAGTACTCTGGCCTCGAACACGAGGTCGTCCCCGGCGTCGTCGAAAGCCTCAAGGTAATAACAAAGTTCTGTTCAGAGCGCATAGCTAAATATGCTTTCGAGTATGCTTACCTAAACAACAGAAAGAAGGTGACTGCTGTTCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAGTCTTGTCGAGAGGTTGCCACAAGGTATCCTGGAATCAAGTATAATGAAATTATTGTAGACAATTGCTGCATGCAGCTTGTTTCAAAGCCTGAGCAGTTCGATGTCATGGTAACCCCCAATCTTTATGGAAATCTTGTTGCTAATACCGCAGCTGGTATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGGGCTGATCACGCAGTGTTTGAACAAGGTGCATCAGCAGGAAATGTTGGTAATGAGAAAGTAGTAGAACAACAGAAAGCCAACCCGGTGGCACTCCTTCTTTCGTCGGCCATGATGCTTAGACATCTCCAGTTTCCTGCATTTGCTGACCGATTGGAAACTGCTGTTAAAAAAGTCATTCTAGAGGGCAAATACCGAACAAAGGACCTTGGAGGGACAAGCACAACCCAAGAGGTTGTTGATGCAGTAATAGATGCTTTAGACTGATTAATTTATTTGCTCATCTTCCCAACGAAGTTTGCCTCGTATATTTTTGGCTAACTTATTTCATCGACATTATTTTTGCACCCTTTAAGGGAAAAATTATCATTTTTTAATCCAGAATAATGTTAATTATTCAACACATAAAAGGATATGTTGAGAGTTTTATAGAGTTTCATAACTGACTGGTGTCCTTTTTAAACATTACTTTTTTGGGAAAGGTACACATCAAATTTATATATGTTCAAGTATCAGTTATTATTATTATTATTATTATTGTGATT 1488 0.4704 MATKRSAPFLKHFFSRLNPSRSVTYMPRPGDGTPRGVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKYEVHGDMKAVPSEVVESVRKNKVCLKGGLATPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATRYPGIKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASAGNVGNEKVVEQQKANPVALLLSSAMMLRHLQFPAFADRLETAVKKVILEGKYRTKDLGGTSTTQEVVDAVIDALD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03297 364 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 34 363 - -
Pste1g03297 364 SMART Iso_dh_2 36 359 IPR024084 -
Pste1g03297 364 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 36 363 - -
Pste1g03297 364 Gene3D Isopropylmalate Dehydrogenase 25 363 - -
Pste1g03297 364 FunFam Isocitrate dehydrogenase [NAD] regulatory subunit 1 24 363 - -
Pste1g03297 364 NCBIfam isocitrate dehydrogenase (NAD(+)) 33 362 IPR004434 GO:0006099
Pste1g03297 364 Pfam Isocitrate/isopropylmalate dehydrogenase 37 359 IPR024084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03297 Pste-Chr1 15115025 15119173 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03297 1 15115025 15119173 Pste1g03297 1 15115025 15119173 ECH
Pste1g03297 1 15115025 15119173 Pste7g01887 7 17256598 17260378 PCT