Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03280 GCTTGTTTTAGGTGTAACTCACAAAAGCCTCTCACTTTCCCCAGACCGAGACCGAGACCGAACGCAATGCAGCAAATGAATCTGTGCCACTGAATATTCTTCTTCTCCTTCCAACCCTCACTGCTATGCCGTTAAACTTCTGATCGGGTCACCACGTCTTAACTCCAATGGCGGCTGTTACTTCTTCTTTCTCTTTCTCCACACTAGCCCAGTCTTCGCAGCAGAGGAACCTCACCCTCTCTTCCAATTCACCAACCTTTCGCTTTCGCGTTGCTTTCTCCACTCACTATGTTGGAGTTCGAACTTCCAATTATGCTTCCAAATTGGTTGTTCGCTGCTCCTCTTCCGTCTCAGACCCTCCAACTGTTTCTGAGACAAAGTTAAATTTTCTCGAGGCATATAAGCGACCAATTCCTAGTATCTATAACACGGTGCTGCAGGAGCTCATAGTCCAGCAACATTTAATGAGATACAAGAGATCATATCGCTATGACGCTGTCTTTGCCCTTGGCTTTGTCACCGTGTATGAGCAACTCATGGAAGGGTATCCAAGTGACGAGGACCGAGACGCCATCTTCAAAGCATACATTAAGGCATTGAAGGAAGATCCTGAACAATACAGAGTAGATGCAAAGAAATTGGAAGAGTGGGCTAGGGCTCAAAATTCAACTTCACTAGTAGAGTTTTCATCCAGAGAAGGGGAAGTTGAGGGGATATTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAATAGGCCTCTTCCGTCTCCTTGAGTTAGCCAATGCAATGGAACCAACAATTTTGGAAAAGCTCTGTAAAGTTTTGAATGTCAACAAAAGAAGTGTTGATCGGGACTTGGACGTGTATCGTAATTTGCTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTAAAGGAATATGTCGACAGAGAGAAGAAGAAAAGAGAAGAAAGGGCTGAACCACAAAAGTCTAACGAGGCCATTACACAGCAGCAATTTTCTAGCCTTTAGTTATGAGGTTCCTCTGAAATGATCACCTTTGTGAAGATTTGGTATTCTTGACTTGTTCTCTCTCTCTCTCTTTACTGTTGGTCGGGCATTGTGTAATCAGAGTGGGGCACTGCATCATCATGGTTTTGCATACTGTATTTGGTGTATCTTCGCTCATGGTAATCCAGCTATTCTGCTCAACCACAATTTACCTGTCCAACAATCTTATGTAATCTTTTCTTACGTATAATTTTTTTCTTCCACACGGTCGCAGATTTATTTTGTAGTACTCAAATACATGCCCGAAAACAAATGTTCTGGTAATTGATATTGAGATTTTTCATATTTCAGCATCTCGCATTTTCTGGGGTGGATGGTTTGTTCACATCCGCGTACAAAGTATGCTTTATCAACCAGAATATGAACGGCAAAAAAAACATGCATTTTACAATTAATATGGTTTTATTTGAATTTTGATCACCAATATTTGCACAATATTAAATAGTATTCGTGACGCA 1534 0.4153 MAAVTSSFSFSTLAQSSQQRNLTLSSNSPTFRFRVAFSTHYVGVRTSNYASKLVVRCSSSVSDPPTVSETKLNFLEAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDAVFALGFVTVYEQLMEGYPSDEDRDAIFKAYIKALKEDPEQYRVDAKKLEEWARAQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCKVLNVNKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKSNEAITQQQFSSL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03280 289 Coils Coil 243 273 - -
Pste1g03280 289 Pfam Thylakoid formation protein 66 271 IPR017499 GO:0010207|GO:0015979
Pste1g03280 289 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 284 IPR017499 GO:0010207|GO:0015979
Pste1g03280 289 MobiDBLite consensus disorder prediction 264 289 - -
Pste1g03280 289 NCBIfam photosystem II biogenesis protein Psp29 63 268 IPR017499 GO:0010207|GO:0015979
Pste1g03280 289 Hamap Protein Thf1 [thf1]. 61 269 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03280 Pste-Chr1 15000880 15005563 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03280 1 15000880 15005563 Pste1g03280 1 15000880 15005563 ECH