Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03216 ATGTTTAGGTTTTCTTGTTTCCATGCTAATGTCCAAGCCAACAAGGCAAAGAAAACAGTTCAACCTTCTACTGAAGCAATGGTGAAGACTTTGCAAGATATTGCCCAAGATCATGGCTGTAAAGATTCATCTAATTCTCCTGGTGCATATTCATCCCCATTGAAAGCAATAAATCTCACAGAGAGTCGTAACAACTGGGATTCAGTTGAGCGCAATTGTAGGTCTGAGGATCTGAATAGGAAGTTTTCCTTTGAAAGTGACAGCCAAGTTCACCAAACTAGGTGTCTTAAGAAGAGCCAGTCTCTTCAAAGTGGGCTTGACCAATGCATAAGAGAAGGTGATGAAGATCTGGAGTTGTCTTGTGATGGTGCCAAAAGCCACAATGAGTCAACAACTTCTATTAATGGAGATTATCGTGATGCAAACCCCGTTGATCAGCATGGAAATAATCAAAATGCTGAGTTTCAAGTCAGTTCAAGTCTTGCAAATGATGCCTCACTTTTTTCAATTGGAGACCCAACACCTTCAGATAAAGATGCCCATGAAATTTCTGACACTCCATTATCTGGTGAATTTGCTGGGGACATTCCTGACCAGACTTCTGTTTCTGGTTCCCCATCTCTAAGGAAGTCACGTTCTGTACCCAATATCAGAGCTTCTATACTTTCTTTTGAAAAGGATAGTTTTAAACGTGCATTATCACTGTCCAGATCTTCTGATGATCTTCATTCTTTAAACATGAGGCAGAAAGAGGAATTTGTCAATGACTTCGATGATCAAATAAGGGGAGATCAAGGAAGAGAGAATGACATGGGAAAAGCTGAAGATGGTCATATGGACAGTTTCTTTGATGATGGTTTTGATTCTTATGTGCTTTCTGGTTCGGCAAAAGACTGGGTAATGCCAATTACAGATGATACAAGTGATGTGAAAACCCATCAAGGAGAGTCCTCAGTTGACTGTGTGGGTGATTTTCCTAAGAAGGATTTTAAGATTAAGCGCATTGAGGATTGGGTAATTGATCTGCAGCATTGTGGACTACCTTTAGAGGAAACACATGAAGAATTGCCTGAAGATTTTGAACCACTAGTTAATGTTAATGCAGTAAATGGTGTGACTGCTGCCAGTGTGGATCATAAGGTCACTCCAGGAATGGAAGCAGCTAAAAGATATATATCTTCTCTGGGTGCTAATGCTAGTGCCGCTCAGCTGGCAAATCATGGGTTGGTTGTTATCCCCTTTTTGAGTGCATTTGTGAGTTTGAAAGTGCTCAATTTGTCTGGAAATGCTATCGTGAGAATAACTGCTGGTGCTCTTCCTCGTGGACTTCATGCACTGAATTTGTCTAGAAACAAGATCGCTAATATAGAAGGATTACGAGAACTTACACGGCTTCGTGTCCTAGACCTAAGCTACAACCGTATATTAAGAATTGGACATGGCCTTGCATCCTGCTCATCTCTGAAGGAGCTGTACCTTGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTGCACCGCCTCTTGAAACTAAGCATCCTGGATCTCCGTTTTAACAAGATTTCAACAGCCAAATGTCTGGGCCAACTTGCAGCCAACTATAACTCTTTGCAAGCTATCAACTTGGATGGGAACCCGGCCCAGAAAAATGTTGGAGATGAGCAGATGAAGAAATATCTGCAAGGCCTTCTTCCCCATCTTGTCTACTACAATCGGCACCCTATCAAAGTAAGCACTTTGAAGGATGGAGCAGAGCGTTCGGTTCGGTTAGGAATGAATTCCCATCAATTTGATCGGAGCCTTAGAGCGGATCGCAAGATCACAAGGAAGGGAAACCAAGGTGTTGTAGCAACTCGTCGATCATTGGCTGTCACTTCTTCTCATGCTCATGCTCGCAGAACTGCGGAAAAACTGTCAAAGGGTAAGCAAGCTCTCCTGCCACCATCTAGAATCAAAGTATCAACCCAAAGTCGCCATCAGTTTGATAATCCCAGCAAAGTATTGAACTCAACTTCAGTGTTCTCCATGCGCAAGAGTCGCAGCGAGGGAAATTTTGGAGTTCTATGATAGGCTGTTCACCACCTTTGTTTCAGTATGCATCTATTTACTTTGTTATTTCGTATTTGTGTCTCATGTTTTCTGTTAGAACAGCTTATCCCCTCTCTTTCATTAAATTTGGTGCTCTAGCTTTTGATAATTTCATTTGTCGGTTGTAATGCCCAATAAGTATTTCTATTCCATTATAGCTTGTGTTCAGTTTATTCAAAACATCATTTCAATTTGTCTGGAGAGCAAGTTTGATGCAATTACAATAATTTTCCTCCTTCCAAGGATAGTTTGTCACTTCCATAATTTTATTATGTGGGATTTGTCGTGCTGACCCTGTTGAAATTGGATTAAACAACTCTATCCAAAGTGGACCAGCGTAATTCAG 2431 0.413 MFRFSCFHANVQANKAKKTVQPSTEAMVKTLQDIAQDHGCKDSSNSPGAYSSPLKAINLTESRNNWDSVERNCRSEDLNRKFSFESDSQVHQTRCLKKSQSLQSGLDQCIREGDEDLELSCDGAKSHNESTTSINGDYRDANPVDQHGNNQNAEFQVSSSLANDASLFSIGDPTPSDKDAHEISDTPLSGEFAGDIPDQTSVSGSPSLRKSRSVPNIRASILSFEKDSFKRALSLSRSSDDLHSLNMRQKEEFVNDFDDQIRGDQGRENDMGKAEDGHMDSFFDDGFDSYVLSGSAKDWVMPITDDTSDVKTHQGESSVDCVGDFPKKDFKIKRIEDWVIDLQHCGLPLEETHEELPEDFEPLVNVNAVNGVTAASVDHKVTPGMEAAKRYISSLGANASAAQLANHGLVVIPFLSAFVSLKVLNLSGNAIVRITAGALPRGLHALNLSRNKIANIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKISEVEGLHRLLKLSILDLRFNKISTAKCLGQLAANYNSLQAINLDGNPAQKNVGDEQMKKYLQGLLPHLVYYNRHPIKVSTLKDGAERSVRLGMNSHQFDRSLRADRKITRKGNQGVVATRRSLAVTSSHAHARRTAEKLSKGKQALLPPSRIKVSTQSRHQFDNPSKVLNSTSVFSMRKSRSEGNFGVL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03216 687 Pfam Leucine-rich repeat 423 521 - -
Pste1g03216 687 PANTHER NISCHARIN RELATED 212 658 - -
Pste1g03216 687 MobiDBLite consensus disorder prediction 120 150 - -
Pste1g03216 687 ProSiteProfiles Leucine-rich repeat profile. 442 463 IPR001611 GO:0005515
Pste1g03216 687 MobiDBLite consensus disorder prediction 166 212 - -
Pste1g03216 687 SMART LRR_typ_2 418 441 IPR003591 -
Pste1g03216 687 SMART LRR_typ_2 507 529 IPR003591 -
Pste1g03216 687 SMART LRR_typ_2 462 485 IPR003591 -
Pste1g03216 687 ProSiteProfiles Leucine-rich repeat profile. 464 486 IPR001611 GO:0005515
Pste1g03216 687 FunFam Protein phosphatase 1 regulatory subunit pprA 379 560 - -
Pste1g03216 687 SUPERFAMILY Outer arm dynein light chain 1 412 574 - -
Pste1g03216 687 SMART LRR_sd22_2 440 461 - -
Pste1g03216 687 SMART LRR_sd22_2 485 506 - -
Pste1g03216 687 SMART LRR_sd22_2 507 531 - -
Pste1g03216 687 SMART LRR_sd22_2 462 484 - -
Pste1g03216 687 MobiDBLite consensus disorder prediction 196 212 - -
Pste1g03216 687 MobiDBLite consensus disorder prediction 124 150 - -
Pste1g03216 687 ProSiteProfiles Leucine-rich repeat profile. 487 508 IPR001611 GO:0005515
Pste1g03216 687 Gene3D Ribonuclease Inhibitor 368 558 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03216 Pste-Chr1 14630292 14633035 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03216 1 14630292 14633035 Pste1g03216 1 14630292 14633035 ECH