Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03204 AGTGGTGAGAATAGAAACTAAAGAGAGAGGGATGGAGGGAATTGGATTTGAAGACTTGTTACCAATGATGGCGAACAGGCTTGGTGGGGAGGGGCTCATAAAGGAGCTATGCAATGGATTTGAGCTTTTGGTGGACAAAGAGAAAGGGGTCATCACTTTGGAGAGCTTGAGGCAAAACGCTGCGCTTTTGGGTCTGCAGGACTTGAAGGAGGATGAGCTTGTGAGCATGATGAGGGAGGGTGATCTTGATGGTGATGGTGCTCTCTCTCAGATGGACTTTTGTGTTTTGATGTTCAGGTTGAGTCCTCAGTTGATGGAACACTCTTGGTTTTGGCTTCAGGAGGCTCTCCACCCTCCTCAATTCAACAACACCAACTCTCCTATCTATAATGTCTTCCTTGACACATCACGTATCTGCAAAGACCCGTTGGAAGAACATGTCAATTTGCACACAACCTCTGGTTCTTTAACTTGGAAGTTCAAAACCCCACCCTCAAACCCAATTTCACATTTTTATTGTCTTTTGTATCTCGTGCCAACCAGATCGCTACAAATATATTTAACATTCAAAGTGGTCGGCAATGATGAAACAATTTCAAACAAGAAAAATGTTTGCCCACTTCATCTGTTAATG 634 0.4369 MEGIGFEDLLPMMANRLGGEGLIKELCNGFELLVDKEKGVITLESLRQNAALLGLQDLKEDELVSMMREGDLDGDGALSQMDFCVLMFRLSPQLMEHSWFWLQEALHPPQFNNTNSPIYNVFLDTSRICKDPLEEHVNLHTTSGSLTWKFKTPPSNPISHFYCLLYLVPTRSLQIYLTFKVVGNDETISNKKNVCPLHLLM 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03204 201 ProSiteProfiles EF-hand calcium-binding domain profile. 58 93 IPR002048 GO:0005509
Pste1g03204 201 PANTHER CALCIUM-BINDING PROTEIN KIC 5 107 IPR044205 GO:0005509
Pste1g03204 201 Gene3D - 4 117 - -
Pste1g03204 201 Pfam EF-hand domain pair 37 89 IPR002048 GO:0005509
Pste1g03204 201 ProSitePatterns EF-hand calcium-binding domain. 71 83 IPR018247 -
Pste1g03204 201 SUPERFAMILY EF-hand 4 103 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03204 Pste-Chr1 14560223 14561943 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03204 6 107 EF-hand Containing Proteins AT4G27280 65.049 1.14e-40 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03204 1 14560223 14561943 Pste1g03204 1 14560223 14561943 ECH