Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03120 GTAACTAATTTGGTTGAAGCGAAATAGGAATAAGGAAGGAGGAGGCATATTTCCCATTCTTACGTACATCCCAAGCGGAGACCAGCACGAAGAACAAAACTAGTTCGTTTGTTTGGACTGTAGTTAAGAACAGGGATCGAAGCCAAGTCAGACGGAGAGAAGAGAGAGAGAATTATGTTAGACGGAACCGAAGATGAAGAGAAGTTTCTCGCCGCCGGAATCGCCGGCCTTCAGCAGAATTCCTTCTATATGCACCGTGCATTGGACTCGAACAATCTCAGGGACGCTTTGAAGTACTCGGCTCAGATGCTCTCCGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTACGAACTATGTCAGTTCTTCTCTCAGATCCACGATACCTTGTTATTAATTTTTTCGTTGGATCATGTAACTGTTTCTATAATTGCGATTGTTAATTTGCGTATTTCTCTCACTGAATTTTTTGTTTTAGATATGCGTGCCTTTGATCAGTTAAGGAAGCTGGAGATGTTCTTCGAGGAAGAGACTCGTCGCGGTTGCTCCATTATTGATCTTTATGAACTCGTCCAGCACGCCGGCAACATTTTGCCTCGATTGTATCTCCTCTGTACAGTAGGATCAGTATACATCAAATCCAAGGAAGCTCCAGCGAAGGATGTTCTTAAGGATCTTGTGGAGATGTGTCGTGGCATTCAGCACCCTGTCCGTGGACTTTTTCTCAGAAGTTACCTTTCTCAAGTCAGTAGGGATAAATTGCCGGATATTGGTTCAGAGTATGAAGGGTGTGTAAGCAACATTTTTGCCCTTTGCTCCTATTCTCTAAGTCTTAAGAATATCAAATCCTCCATTGTTTCCTTTTTTGTGGTTCATCTTTTGTTTTCTGCTGCCTTTCTGATTCGCTCCCTGGATGCGGATACTGTAGCAGATGCTGTAGAGTTTGTACTCCAAAATTTCACTGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGTTGCTGACCCTGAGTTGAGGCTTGCTGTCGGGCTTTCTGGTCTGCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGCGAGTTGCGTGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAGATAGAAGGTGTTGACCTGGATATGTACAAAGATGTTGTGCTTCCCAGAGTACTGGAGCAGGTTGTGAATTGCAAAGATGAGTTGGCTCAGTTCTACTTGATGGATTGCATAATTCAAGTCTTCCCTGATGAGTATCACTTGCAAACTCTTGATGTGTTGTTGGGTGCTTACCCTCAACTTCAGACATCTGTTGACATCAAGACAGTACTGTCCCAATTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGAGGTGTTGCCAGAGTTTTTGCAAGTGGAGGCATTTTCCAAATTAAGCAATGCCATTGGCAAGGTGATAGAAGCACAACCTGATATGCCCACTGTCGGGGTTGTAACTTTATATTCATCCCTTCTCACCTTCACTCTTCACGTCCACCCTGAGCGACTTGATTATGCGGATCAAGTCTTGGGAGCATGTGTGAAAAAACTCTCTGGCAAAGGGAAAATTGAGGACAACAAAGCAACTAAGCAAATTGTTGCTCTACTCAGTGCTCCACTAGAAAAATATAATGATATTATGACAGCATTGAAGCTTTCAAATTATCCTCGTGTAATGGAATACCTTGATATTCCAACTACTAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGGAACACGCATTTCTACTTCAGAAAAGGTTGAAGCATTGTTTGAACTGATAAAGGGACTTATTAAGGATTCTGATGGGATTCCTAATGATGAGCTGGATGAAGACGATTTCAAAGAGGAGCAGAATTCTGTTGCCCGACTAATCCAGATGCTTTATAATGATGATGCAGAAGAAATGTTTAAGATCATTGATACTGTGAGGAAGCACATACTGACTGGAGGACCAAAACGTCTGCCTTTCACTGTTCCACCTCTTGTTTTTTCTTCACTAAAGTTGGTCAGACAGTTGCAAGGTCAAGAAGAAAATCCTTTTGGAGATGATGCATCAACAACACCTAAGAAAATTTTCCAGCTTTTAAATCAGACCATCGAGACTTTGTCAGGGGTCCTGGCACCAGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGGCTGCAAATGATTGTGACTTGGAACCTGTTGCTTATGAATTTTTCACCCAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCAGAGCACAGATCACTGCAATCCATTTAATAATAGGGACTCTTCAAAGGATGCATGTCTTCGGTGTTGAAAACAGGGATACTTTAACTCACAAGGCCACAGGGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCCGTGTATGCATGCTCACATTTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGTCCTTTGCTTATAGCATTGTTCAGCGTTTTTGCGTTTACTGTTTGGTTGAACAGGGTCTTATTATGTCTCAAACGGGCTTTAAGAATTGCAAATGCTGCCCAGCAAATGGCGAATGCAGCTCGAGGTAGCACCGGATCAGTAATGCTCTTCATTGAGATATTGAACAAGTATCTTTACTTCTTTGAGAAGGGAAACCTACAAGTCACCGTTGCTGCTATCCAGGGCTTAATTGAGTTAATTATGAATGAAATGCAGGGTGACACCACAACTCCAGATCCAGCTGCTGATGCTTTCTTAGCCAGTACCATGCGATATATAGAGTTCCAGAAACAAAAAGGCGGCGCAGTAGGCGAGAAGTATGAAGCCATCAAGGTTTCACATGCTGGATGACTGATACCACCGATTCAGTCTTAGATTTTGAGGCAACCTGTTCTTGGGATGATCCAGCAATTGTTTTCAGGCTTAAATAAGTTTCGATATTGGTAAATTTTGTGTTGGGTTTTCAATAATTTTTTTTTCTGATTGGGTCTCTAATAATTTTTTTTTTTGTTTTGGGTCCTTAAAATACTCTAGAGAGTGCTTAAAATTGTTTTGAAATACTTTAGAAAAACAGTTTAGATAGCACTTGAAGGACTCAACAAAATAAAAAATTTATTAGGAATTCAACACAAATCAAGTATTTATTGGAGATTCAATGCAAAATTTACAAATATATTAGGATTCGAAACATATTTAAGCTTTGTTTTTAATCCTCTTTAGATTTCTCAACTGAAGAACCCCAAGTTTGTGTTCCTAGTATGTGCTGACAGCAAAATTACTTGGTAATTCAGTTAGGACTCCGACTCACTCTGTAACTGAGACTGAACACTGTTAACCATTGCTAGATCTTTTTTTTCCCCCAATTTTACATCAGTTAAGAAAATTTATTTGTAGCACGGTTGCTACATTTCAATTCTTAAAAGTGTGCACAAAGGTTTAGACGGACTTGTGGATTTCTTGTATTTTGGTATAGATTATAATTTATTGTTA 3540 0.4037 MLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELCQFFSQIHDTLLLIFSLDHVTVSIIAIVNLRISLTEFFVLDMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGCVSNIFALCSYSLSLKNIKSSIVSFFVVHLLFSAAFLIRSLDADTVADAVEFVLQNFTEMNKLWVRMQHQVADPELRLAVGLSGLQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQTSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHPERLDYADQVLGACVKKLSGKGKIEDNKATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEYLDIPTTKVMATVIIQSIMKNGTRISTSEKVEALFELIKGLIKDSDGIPNDELDEDDFKEEQNSVARLIQMLYNDDAEEMFKIIDTVRKHILTGGPKRLPFTVPPLVFSSLKLVRQLQGQEENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQITAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGESPLLIALFSVFAFTVWLNRVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNLQVTVAAIQGLIELIMNEMQGDTTTPDPAADAFLASTMRYIEFQKQKGGAVGEKYEAIKVSHAG 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03120 908 Gene3D - 562 889 IPR042491 -
Pste1g03120 908 FunFam Vacuolar protein sorting-associated protein 35 562 788 - -
Pste1g03120 908 Pfam Vacuolar protein sorting-associated protein 35 12 62 IPR005378 GO:0015031|GO:0030906|GO:0042147
Pste1g03120 908 Pfam Vacuolar protein sorting-associated protein 35 81 861 IPR005378 GO:0015031|GO:0030906|GO:0042147
Pste1g03120 908 PIRSF Retromer_Vps35 1 907 IPR005378 GO:0015031|GO:0030906|GO:0042147
Pste1g03120 908 SUPERFAMILY ARM repeat 310 862 IPR016024 -
Pste1g03120 908 PANTHER VACUOLAR SORTING PROTEIN 35 5 62 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03120 Pste-Chr1 14075739 14092836 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03120 1 14075739 14092836 Pste1g03120 1 14075739 14092836 ECH