Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g03099 | TTAAGTGTGTATTCAAATTATCTTCCGAATCCGCTTTGGGTAGGCCCAATAAGTTGCGTCCACTCTGTATTACACTTCTGCAGATGATTGGTTTCAGAGAATTAAGCACTTGTTTACAGAAGATAGTTCTTTCACCCTTTAGCTTCTGAATCTTCGACAATGGTGCTTGAGGCGACGATGATCTGTATCGACAATTCTGAATGGATGCGTAATGGGGATTATGCTCCTTCTCGATTTCAAGCTCAAGCAGACGCTGTCAATCTCATTTGCGGTGCTAAAACCCAGTCTAATCCGGAAAATACAGTGGGAGTTCTCACAATGGCAGGGAAAGGCGTTCGTGTTTTGGTCACTCCTACCAGTGATCTGGGCAAGATCTTAGCCTGCATGCATGGACTTGATATAGGTGGTGAGATGAACCTAGCTGCGGGCATTCAGGTGGCACAATTGGCTCTTAAGCATCGGCAAAATAAAAAGCAACAACAAAGGATTATTGTCTTTGCTGGAAGTCCTGTCGAGCATGAAAAGAAGATGTTGGAGCTGATAGGGAGAAAGTTGAAAAAGAATAGTGTTGCACTTGATATTGTTAATTTTGGTGAAGAAGATGAAGGGAAGACAGAGAAGCTGGAAGCACTCCTCGCAGCTGTTAATAATAATGATACCAGCCACATTGTTCATGTTCCATCTGGTCCAAATGCTCTTTCTGATGTACTTATAAGTACACCTATTTTTACTGGTGATGGGGAAGGTGGAAGTGGTTTTGCTGCTGCTGCTGCTGCCGCTGCTGCTGGTGGTGTATCCGGATTTGAGTTTGGTGTGGATCCAAACTTGGATCCAGAATTGGCTCTTGCTCTACGAGTTTCAATGGAAGAGGAGAGAGCCAGGCAGGAAGCAGCTGCGAAAAAGGCTGCAGAGGATGCTTCCAAACAAGAGAAGGGAGGTGAGCAGCAAGCCAGCTCACAAGATGCAACAATGACTGAGCGTGCCAGTGCAGCAACATCCAAAGCTGAGAATAAGACAAGTGATCTGATGGACGATGAGAATGCCCTACTACAGCAGGCACTTGCAATGTCAATGGATGATCCGACCATCAGCGATGATGTAAAAGATACAGATATGTCAGAAGCATCTGCAAGTGATCCCGATTTGGCTCTAGCGCTCCAATTGTCAATATCAGATAGTGCGAAGGATCAAGCTAGCCAGTCAGACATGAGTAAACTGTTGGCTGATCAATCTTTTGTATCTTCTATCCTTGCATCGCTTCCTGGGGTTGACCCAAATGACCCATCTGTCAAGGATTTGCTGGCGTCCATGCAAAGTCAGTCTGAGCCTGAACAGAAGAAAGACGACAAGCCATTAAGCGAGGAGGAGAAGAAGTAATTCTAAGTGCCGCTTTCCCTGTATGGTTTAATTTGGTGGTAGCATTTTTCGGGGTTCTTACTAATGGAGGAACTATTTTTGCATGTTCCTATAAACTATTGGAACTGAATGCAAGTCTCGCAATTGAAAATTGGATGATTTTTAACCAAAAATGTTCTTGATTGTCATGCCTTATTTTTAACTAAAAATGGCTTTTAAAGGGCAGTTTTAACACCGAAGAAAGTTCCAACTATCAAAATTTAATTCGTAATTCA | 1631 | 0.4341 | MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLDIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVEHEKKMLELIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLAAVNNNDTSHIVHVPSGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDASKQEKGGEQQASSQDATMTERASAATSKAENKTSDLMDDENALLQQALAMSMDDPTISDDVKDTDMSEASASDPDLALALQLSISDSAKDQASQSDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSEPEQKKDDKPLSEEEKK | 405 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g03099 | 405 | Pfam | Ubiquitin interaction motif | 224 | 237 | IPR003903 | - | |
| Pste1g03099 | 405 | Pfam | Ubiquitin interaction motif | 326 | 339 | IPR003903 | - | |
| Pste1g03099 | 405 | Pfam | Ubiquitin interaction motif | 292 | 307 | IPR003903 | - | |
| Pste1g03099 | 405 | Gene3D | - | 220 | 306 | - | - | |
| Pste1g03099 | 405 | MobiDBLite | consensus disorder prediction | 242 | 258 | - | - | |
| Pste1g03099 | 405 | MobiDBLite | consensus disorder prediction | 242 | 290 | - | - | |
| Pste1g03099 | 405 | Gene3D | von Willebrand factor, type A domain | 3 | 186 | IPR036465 | - | |
| Pste1g03099 | 405 | ProSiteProfiles | VWFA domain profile. | 5 | 189 | IPR002035 | - | |
| Pste1g03099 | 405 | SMART | VWA_4 | 2 | 175 | IPR002035 | - | |
| Pste1g03099 | 405 | SUPERFAMILY | vWA-like | 4 | 175 | IPR036465 | - | |
| Pste1g03099 | 405 | MobiDBLite | consensus disorder prediction | 259 | 284 | - | - | |
| Pste1g03099 | 405 | PANTHER | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 | 1 | 397 | IPR027040 | GO:0006511|GO:0008540 | |
| Pste1g03099 | 405 | Pfam | von Willebrand factor type A domain | 6 | 115 | IPR002035 | - | |
| Pste1g03099 | 405 | CDD | PSMD4_RAZUL | 345 | 391 | - | - | |
| Pste1g03099 | 405 | MobiDBLite | consensus disorder prediction | 389 | 405 | - | - | |
| Pste1g03099 | 405 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 222 | 241 | IPR003903 | - | |
| Pste1g03099 | 405 | Coils | Coil | 232 | 252 | - | - | |
| Pste1g03099 | 405 | CDD | VWA_26S_proteasome_subunit | 1 | 188 | - | - | |
| Pste1g03099 | 405 | MobiDBLite | consensus disorder prediction | 365 | 405 | - | - | |
| Pste1g03099 | 405 | FunFam | 26S proteasome non-ATPase regulatory subunit 4 | 3 | 186 | - | - | |
| Pste1g03099 | 405 | FunFam | 26S proteasome non-ATPase regulatory subunit 4 homolog | 220 | 306 | - | - | |
| Pste1g03099 | 405 | SMART | uim | 292 | 311 | IPR003903 | - | |
| Pste1g03099 | 405 | SMART | uim | 222 | 241 | IPR003903 | - | |
| Pste1g03099 | 405 | SMART | uim | 324 | 343 | IPR003903 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g03099 | Pste-Chr1 | 13912318 | 13926378 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste1g03099 | 1 | 13912318 | 13926378 | Pste1g03099 | 1 | 13912318 | 13926378 | ECH | |
| Pste1g03099 | 1 | 13912318 | 13926378 | Pste7g01724 | 7 | 16055965 | 16061395 | PCT |