Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03087 CCCAAACTGAATCGCATCGAAGAAGAAAATGATCAACGCTCATAAGATGCGCGTGGCATTCACCGTCGCCACATTAGCCGCCGCGGCTGCTATCATCTCCGTCTTCTTTGCCGCGCGAAGGCGCAAGCAGCACAAGTCTTCTCCGTGCTATTTACACTCCGAACAGAAACCACAGAGTTCATTTAAGCGCGTCTTAGCAGATAACTCCTACACTCTGTTCAAGCATCTCAGCAACGACGAGAATGCTTCAAATTCGCATCCATTTGAAGCGGAGATTACGGCATTGTTGAAAAATCCTCAGCCTGAAATTGAATTTGGATCTGAGATCGTGGAGTTGGAAATGAAGGATTCACATATTTGGGTTCATACCGAGACGCAGTTAAAGGAACTAGTTGATGTGTTGAGCGAAGAGAGGTTCTTTGCTGTGGACACGGAACAACATAGCTTAAGATCGTTTCTAGGCTTCACAGCATTAGTTCAGATTTCTACGTGGGAGAAAGATTATTTGGTTGACACAATTGCCCTGCATGATTTTATGGGCATTCTTCGCCCAGTTTTTGCCAACCCTTCAATTTGTAAAGTTTTCCATGGAGCTGACAATGATATAATCTGGCTACAGAGGGACTTTCACATGTATGTTGTTAATCTATTTGATACTTCAAAGGCATGCGAGGTTCTGTCAAAACCACAAAAATCACTTGCTTATTTGCTTGAAACTTACTGTGGTGTGACAACAAATAAATCATTACAGCGGGAAGACTGGAGACAGCGCCCTCTATCACCAGAAATGGTACATTATGCCCGAACAGATGCACACTATCTGTTGTATATTGCAAATTGTCTGATCATTGAGCTCAAACAACTTGACAATGAAAACTCTTGTTCCTATGACAAATTGCATTTTGTTCATGAGGCTAGTCGCCGATCAAACATGATTTGTTTGCAACTTTTCACAAAGGAGATTGAAGCTTATCCTGGAGAATCTTCCGCATTATCTTTATTTTCTCGTCAAGCAAGCAGTCATGGTTGTCCATCTATTTCAAATGAAACCCAGAATATTGTGAGGCAACTGTGCGCATGGAGAGATCTAATGGCTCGTATTCATGACGAGAGCTTAAAATATGTACTGACAGACCAGGCAATTGTTGCTTTGGCAAGTCAGTCTTCAGCAAGTCACTCTGAAATATGCAACACCATAGCCCAGGCTGATATCAATTTGGAAATGGGTGTCAACTCTTTCATCCCTTCCCCATCTCCTGTTGTTTACAGTCACTTGAGTGATATCTATCATCTGCTGGCAAATAATTTGGTTAATGATGATGATATTTATTCAGTGATTCTTCACAAGTGTCTAGGTCAAAATGGGAGTTGTCCACTTTCTATGTTTAATTATGCTTTGTTGATAAACAGTAACCTAAGACCTACTTTAGCCTATAAACAACCTGGCCCAAAAAATCCTAAACAATATTCTCGGAAGGCTTCTCGAGATTTGTTTGTTAAAAAATTCTCCTGTAAATCTCCTGTTTATCACAATTGCCGGATATATGCTAATGATGGGAGGCTGCTTTGTTATTGTGATGAGAAGAAGCTTAGATGGTACCTTAGTCGTGATCTTGCAAAACTTATTGATGAGGAACCTCCAGCTATAATGCTTCTTTTTGAACCCAAAGGCCGCCCAGAGGATGAAGACAATGATTTTTACATCCAGAGTAAGAAAAATATATGTGTTGGGTGTGGTGAAGGAAATCACTACTTACGGTATCGAATAATCCCATCATGTTACAGAATACATTTTCCTGAGCATTTGAAAAGCCATCGTTCTCATGACATTGTCCTACTTTGTGTTGATTGCCATGAAGTTGCTCATGCTGCCGCAGAAAAGTATAAGAGAAAAATAGCTGTTGAATTTGGGATTCCTCTCTACCTAAGGAGTGTAGTTCATCCAAGTCAAAAGACTGAAAAACAGATCAAAGAGGGAGGTGTGTCTCCATTACAGTTGCGAACAGCAGCTATGGCTCTTCTACGCCATGGACCAAGAATGCCTCTCAATCGCCATGAAGAACTAACTGAGATTATAAGGAGATATTATGGAGGAAGGGATATATCTGACGAAGATCTAGAAAAAGCTTTGCAAGTTGGCATGACTCCTCATGAGAGAAGACGATTTGAGAGGAAGAGAGGATTTTCTTTTAGGCATTCCTTGGGCAGTATAGCTACAGTGCCAGAACAGGATAATCATGCTGATTGTACACCCATAATGAGTAATGTGGACACCATGAAAGGTGATGCTCATGTTGGCTCATATCCAAATGACGAAACAAGTGAAGTAGATGGAGAACTTTTGATGAGAAAAGTTGATTTTGGAAACTCCACTTTAGCTTCTGATATTACAGTTAATGGAACTTCTGCATCTTTGAATAAAAATGCTAGCACAGTGGAAACTACAGATTACAGTGAAAGCAGTGACTTTACTGTAAATGTTGATAATAGCTGTCTGAGCAGAAGGCAAGAAAATGAACCTAGTCAACATAATTCAAAACTATCACTCTTGGGACATGGGCCACATGGGAAACAAGTTGTAGAACATTTACTGAAGGAGTATGGGGAAGATGGCATTCGAGAGTTTTGTCAAAGATGGAGACAAGTGTTTGTAGACGCTGTAAATCCACGTTTTCTTCCTGGTGGTTGGGATGTAAAACACAGTGGAAGAAGGTACTTCGGCGAGTTCAGTGTATACAATCCTGACAAGACAGTAGCTGCTGATACCTGCTAGTCGGCAGGAATTACAAGTAACTTGAGTGCCGTCTAAATATGTTAGATTAACAACTTGTTCTCACGGCATAGAAACTACATAAACAAGTTGATTTCATTTTGTTATTTTTACTACTTGAGAATTTTCGAGTATTTTGGTTGTTTGTAACAATCCTGTTTATTCTAACTATTAATGTTTTCAAAGCACAATCCACTTCATTTAATCGCCTTCAGGGTGACCACTTAAACCAGAGGACAAATTGTAGGGGAAAGAAGCACCTTACCCACCCATCCAAGCCCTACCATACAGCTAAAG 3067 0.404 MINAHKMRVAFTVATLAAAAAIISVFFAARRRKQHKSSPCYLHSEQKPQSSFKRVLADNSYTLFKHLSNDENASNSHPFEAEITALLKNPQPEIEFGSEIVELEMKDSHIWVHTETQLKELVDVLSEERFFAVDTEQHSLRSFLGFTALVQISTWEKDYLVDTIALHDFMGILRPVFANPSICKVFHGADNDIIWLQRDFHMYVVNLFDTSKACEVLSKPQKSLAYLLETYCGVTTNKSLQREDWRQRPLSPEMVHYARTDAHYLLYIANCLIIELKQLDNENSCSYDKLHFVHEASRRSNMICLQLFTKEIEAYPGESSALSLFSRQASSHGCPSISNETQNIVRQLCAWRDLMARIHDESLKYVLTDQAIVALASQSSASHSEICNTIAQADINLEMGVNSFIPSPSPVVYSHLSDIYHLLANNLVNDDDIYSVILHKCLGQNGSCPLSMFNYALLINSNLRPTLAYKQPGPKNPKQYSRKASRDLFVKKFSCKSPVYHNCRIYANDGRLLCYCDEKKLRWYLSRDLAKLIDEEPPAIMLLFEPKGRPEDEDNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKYKRKIAVEFGIPLYLRSVVHPSQKTEKQIKEGGVSPLQLRTAAMALLRHGPRMPLNRHEELTEIIRRYYGGRDISDEDLEKALQVGMTPHERRRFERKRGFSFRHSLGSIATVPEQDNHADCTPIMSNVDTMKGDAHVGSYPNDETSEVDGELLMRKVDFGNSTLASDITVNGTSASLNKNASTVETTDYSESSDFTVNVDNSCLSRRQENEPSQHNSKLSLLGHGPHGKQVVEHLLKEYGEDGIREFCQRWRQVFVDAVNPRFLPGGWDVKHSGRRYFGEFSVYNPDKTVAADTC 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03087 914 SMART 35exoneu6 109 277 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pste1g03087 914 ProSiteProfiles HRDC domain profile. 338 418 IPR002121 GO:0003676
Pste1g03087 914 Gene3D HRDC domain 330 432 IPR044876 -
Pste1g03087 914 SUPERFAMILY HRDC-like 337 390 IPR010997 GO:0000166|GO:0044237
Pste1g03087 914 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 38 907 IPR045092 GO:0000175|GO:0000467
Pste1g03087 914 FunFam Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain 46 314 - -
Pste1g03087 914 Pfam HRDC domain 343 382 IPR002121 GO:0003676
Pste1g03087 914 Pfam 3'-5' exonuclease 111 272 IPR002562 GO:0003676|GO:0006139|GO:0008408
Pste1g03087 914 Gene3D - 33 314 IPR036397 GO:0003676
Pste1g03087 914 SUPERFAMILY Ribonuclease H-like 47 304 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03087 Pste-Chr1 13852846 13860200 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03087 1 13852846 13860200 Pste1g03087 1 13852846 13860200 ECH