Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03075 TCCATAATCAGATTGGCCAATTCAAAGTCACCCATTTCAGGACCCTGGTTTAGGCTGAAAACCCACTTCCCAAAACCACTTTTCCCCCCTTCTTATGCCTGCCACAGCGTGAACTTCACTTGCAAGAAGCAATTTTTGCATGGAAACAGCAGGAACAGGTTGGATTTTAGGACTTGGTCCATTGCTGGGTTTGATTATGGGAACTTTGAGGGGCCTCAGTCTGTGCTTGAGGCTGCTGCAGTGTTGACAGCCATCATTGTTGTGCATGAGAGTGGTCACTTCCTTGCTGCTTCTCTCCAAGGCATCCATGTGAGTAAGTTTGCTGTAGGGTTCGGTCCAATTTTAGCAAAGTTTAATGCCAAAAATGTGGAATATTCCATCAGGGCTTTCCCACTTGGTGGCTTTGTGGGGTTCCCTGATAATGATCCAGAGAGTGATATTCCTGTTGATGATGAAAACTTGCTTAAGAACAGACCAATACTGGATAGGGTGATTGTGGTTTCAGCTGGTGTTATTGCTAACATAATTTTTGCATTTGTTATTATCTTTGCTCAAGTCCTGTCTGTTGGTTTGCCTGAGCAAGAGGTATTTCCTGGGGTGGTTGTGCCTGATGTTAGACCCTTTTCAGCTGCTTCCAGAGATGGGTTGCTTGCCGGGGATGTGATCCTTGAAGTCAATGGAAGAGAGTTTGCTAAACCTGGTCCTAATGCTGTTTCTACCGTTGTTGATGTCATCAAGAGGAACCCCAAAAGATATGTTTTGCTCAAGATTAAAAGGGGGGAGCAGAATTTTGATATAAGGGTCACCCCAGATGAGAATTTTGATGGAACTGGGAAAATTGGAGTTCAGTTAGCCCCTAATGTGAGGATAGCTAAGGTTAGACCAAAAAATCTGGTGGAAGCTTTGAACTTTACTGGAAAAGAGTTTTGGGGTTTAGCATCTAATGTTTTAGATGGGTTAAAGCAGACTTTTTTGAACTTCTCCCAGTCAGCTAGTAAGGTTTCTGGTCCTGTAGCCATTATTGCTGTTGGTGCAGAAGTGGCACGGTCAAATATTGATGGCCTCTTCCAATTTGCCGCGATACTCAATATCAACCTTGCAGTTATAAACCTTCTTCCTTTGCCTGCTTTAGATGGAGGTACATTGGCATTGATCCTCATTGAGGCAGCCAGGGGTGGGAGAAAGCTTCCTTTGGAAGTGGAGCAAACGATCATGTCTTCTGGAGTTATGCTTGTTATAATTCTGGGTTTATTCCTTATTGTTCGTGATACCCTAAACCTTGATTTTATCAAAGACTTGTTTGGGCTTCAAAAAGTATATCATGATTCTCATCTTCATTTGCAATGCGGTTGCACCAGTATCTTAGCTAGTGGTATATCTGTAGAGGAGGCAAGATCATTTCAAATGATTGAGGTAAGTTTCTTCCTCCAAGGAGTTATGTCAGAGGCATCCCTTTGTTACCAATTCATTGATCTAATACGGATTGGATTTGTGATCCTAGAATATAACTTACAAGTTACAACTACTAGTTTTCGTTATGATTTT 1545 0.4227 SIIRLANSKSPISGPWFRLKTHFPKPLFPPSYACHSVNFTCKKQFLHGNSRNRLDFRTWSIAGFDYGNFEGPQSVLEAAAVLTAIIVVHESGHFLAASLQGIHVSKFAVGFGPILAKFNAKNVEYSIRAFPLGGFVGFPDNDPESDIPVDDENLLKNRPILDRVIVVSAGVIANIIFAFVIIFAQVLSVGLPEQEVFPGVVVPDVRPFSAASRDGLLAGDVILEVNGREFAKPGPNAVSTVVDVIKRNPKRYVLLKIKRGEQNFDIRVTPDENFDGTGKIGVQLAPNVRIAKVRPKNLVEALNFTGKEFWGLASNVLDGLKQTFLNFSQSASKVSGPVAIIAVGAEVARSNIDGLFQFAAILNINLAVINLLPLPALDGGTLALILIEAARGGRKLPLEVEQTIMSSGVMLVIILGLFLIVRDTLNLDFIKDLFGLQKVYHDSHLHLQCGCTSILASGISVEEARSFQMIEVSFFLQGVMSEASLCYQFIDLIRIGFVILEYNLQVTTTSFRYDF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03075 515 Pfam Peptidase family M50 79 415 IPR008915 GO:0006508
Pste1g03075 515 CDD S2P-M50_PDZ_RseP-like 75 426 - -
Pste1g03075 515 SMART pdz_new 187 261 IPR001478 GO:0005515
Pste1g03075 515 Gene3D - 191 285 IPR036034 GO:0005515
Pste1g03075 515 ProSiteProfiles PDZ domain profile. 199 260 IPR001478 GO:0005515
Pste1g03075 515 PANTHER REGULATOR OF SIGMA-E PROTEASE RSEP 70 430 IPR004387 GO:0004222|GO:0006508|GO:0016020
Pste1g03075 515 CDD PDZ_metalloprotease 187 270 - -
Pste1g03075 515 NCBIfam RIP metalloprotease RseP 200 427 IPR004387 GO:0004222|GO:0006508|GO:0016020
Pste1g03075 515 SUPERFAMILY PDZ domain-like 194 272 IPR036034 GO:0005515
Pste1g03075 515 Pfam PDZ domain 201 259 IPR041489 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03075 1 13781317 13782888 Pste1g03075 1 13781317 13782888 ECH