Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03074 GAAAAATGATTGTACCCTCTTTTTCTTTTCATACTTGAGTGTACACACATCATCACTTCATTGTTCATCCTCTGTCTTTCTCTTTCTCTAGTTTTTACAACATGGCAGCTGCGGTAACTGCTGCAGTCTCCTTTCCAGTCTCCAAGTCCACCTCTCTTCCAAGCAGAACCTCTATCGTTGCCACAGATAGAATAGCCTTCAACAAGAGATGTTTCAATCAGTGGAAGGTAGTTTCCATCAGAGCCCAAGTGACCACAGAGGCACCTGCAAAGGTTCAAAAGGAATCCAAGAAACAGGATGAAGGTGTGATTGTGAACAAATTCAAACCCAAGGACCCATATATTGGTAGGTGTCTTCTCAACACAAAGATCACTGGGGATGATGCACCTGGAGAAACTTGGCACATGGTCTTCAGCACTGAGGGAGAAGTTCCTTACAGAGAGGGACAATCAATCGGGGTGATTCCTGACGGAGTTGACAAGAATGGCAAGCCTCACAAACTGAGATTGTATTCCATTGCTAGCAGTGCCATTGGTGATTTTGGAGATTCCAAAACTGTTTCTTTATGCGTGAAACGTCTGGTCTACACAAATGAAAACGGAGAACTTGTCAAGGGAGTTTGCTCAAATTTCTTGTGCGACTTGAAGCCTGGAGCTGAAGTAAAAATTACTGGACCTGTTGGTAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACTGTCATCATGTTGGCAACTGGAACTGGAATTGCCCCATTCCGCTCATTTTTATGGAAAATGTTCTTCGAGAAGCATGATGATTACAAGTTCAACGGTTTGGCATGGCTCTTCTTGGGTGTCCCCACAAGTAGCTCGCTACTGTATAAGGAGGAATTTGAAAAGATGAAAGAGAAAGCACTGGACAACTTCCGGCTTGACTTTGCTGTGAGCAGAGAACAAACAAACGAAAAAGGAGAAAAAATGTACATCCAAACACGAATGGCTCAATATGCGGAAGAGTTATGGGAATTACTTAAGAAAGATAACACTTTTGTCTACATGTGCGGGCTGAAAGGGATGGAAAAGGGAATTGATGAAATAATGGTGTCATTGGCCGCAAAAGATGGTATCGATTGGACTGAGTACAAGAGGCAATTGAAGAAGGCAGAACAATGGAATGTGGAAGTCTACTAATTTAATTTGTGTTCGCTTCCACTTTGCACAGATATCAAGTCAAGTCCTTCTTTCTGCAGCAGCAAATCTATTTTACTGTCCTGCGTTATGTAGATAAGTTTACGGCCCTGTAATTTTTCTACCATGGGGATTTTTACTTTGCTTATGAACAAGTTGCATTGCGACAAACTTGCATGAAATAATTTTGAGAATCATGCAATATAGATGAGCCAACTTGGTTTTAAAAATTAAGAAAATTTTCTTTTGTGAAGATTTAGTAGCGTCTAGTTTTGAATGAAGTAAAATATTTGAATGAAGTCATGGTTCTAGTGTTGAATCTGCAAGCTTATTGGCCTCCCTTAATATGTTGATAAAAGTGAATGAGTGGAATATGCTGTGCAGTTGGAGTATTTGAGTGACCAATTACGCATACAAGCAGCCTAGTATATAATCATGGAGAAGCTGCACAGACCCAAAGGAATCTGTTTGAACAGCAAGTTTAGCTTGG 1659 0.4069 MAAAVTAAVSFPVSKSTSLPSRTSIVATDRIAFNKRCFNQWKVVSIRAQVTTEAPAKVQKESKKQDEGVIVNKFKPKDPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPDGVDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKALDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDEIMVSLAAKDGIDWTEYKRQLKKAEQWNVEVY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 112 122 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 250 261 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 135 142 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 310 318 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 286 302 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 172 181 IPR001709 GO:0016491
Pste1g03074 356 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 238 247 IPR001709 GO:0016491
Pste1g03074 356 PIRSF FNR-PetH 3 356 IPR035442 GO:0016491
Pste1g03074 356 PIRSF Frd-NADP+_RD 1 356 IPR015701 GO:0016491
Pste1g03074 356 Gene3D - 194 356 IPR039261 -
Pste1g03074 356 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 197 356 IPR039261 -
Pste1g03074 356 Pfam Oxidoreductase NAD-binding domain 209 323 IPR001433 GO:0016491
Pste1g03074 356 Gene3D Translation factors 47 193 - -
Pste1g03074 356 FunFam Ferredoxin--NADP reductase, chloroplastic 61 193 - -
Pste1g03074 356 SUPERFAMILY Riboflavin synthase domain-like 55 200 IPR017938 -
Pste1g03074 356 FunFam Ferredoxin--NADP reductase, chloroplastic 194 356 - -
Pste1g03074 356 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 77 199 IPR017927 GO:0016491
Pste1g03074 356 PANTHER - 3 356 IPR015701 GO:0016491
Pste1g03074 356 CDD CYPOR_like_FNR 72 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03074 Pste-Chr1 13779418 13788116 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03074 1 13779418 13788116 Pste1g03074 1 13779418 13788116 ECH
Pste7g01710 7 15881180 15884606 Pste1g03074 1 13779418 13788116 ECH
Pste1g03074 1 13779418 13788116 Pste7g01710 7 15881180 15884606 PCT