Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03052 GAGTTTTCTTATCATCTTAGCTAGCTCTAGTCATGGCCAACAAAAATTATTCTCTTCCTCTCAATGAAAAATATAGGTACAAGTACAGTTATAAAAGGGTAATGGATAGCTTGCTTTTAATCCTTCTCTTGTTGCTGCTAGGCTACCGCGTTATCTCTGTCAACAACTACTCCTTCCCTTGGTTTGTTGCATTTTTGTGCGAATTATGGTTCACCTTCGCTTGGTTTTTCACCCTCACCACCCAATGGAATCCAGCAGTTATCAAAACCTACCCAGACCGTCTCTGGCAAAGTGTGGAAGAGGTTCCAGCAGTGGACTTGTTTGTGACAACAGCAGATACTGTGCTGGAGCCACCAATAATCACAGTGAACACAGTGTTGTCTCTGTTGGCAGTTGATTACCCAGCTCACAAGCTAGCTTGTTATGTTTCCGATGACGCATGTTCCCCTCTTACCTTCTACGCTCTTCAACAAGCCTTTCAATTTGCAAAGTTTTGGGTACCCTTTTGTAGAAAGTACGAGCTGCAACTTAGAGCTCCACTGAGATACTTCTCTGAGGTCACCACACCCAACGCCACGCCACAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATGATCATCTGAGGAGCGAAATAGAATTGGATACTTTTAGAAAATCAAATCCATGTCATGGAGACTTTGCGGCTTTCGAAAACACTCAGAAGACAGATCACCCATCCATAATCCAGACAAGAGTCTCCGGGTTGATAACCAATGCTCCTTTTATGCTGAACGTGGATTGTGACATGATTGTAAGTAATCCAAACATTGTTCAGCATGCGTTGTGTATTTTTCTTGATCCCAAAGGAGAAAAAGAAGTTGCATTTGTTCAATTTATCCAACAATTCTACGCTACATTGAAGGACGATCCTTTTGGAAACCAGATGGCAATTTTGATTAAGTATTTGGTGGCTGGATTAACTGGACTCCAAGGACCTTTTTACGGGGGAACAAACTGCTTTCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGAAAACATTGAAAAAGGAAATGGCATATCAGAGGAGGAACTAAAACAAAAATTCGGAGCTTCAAAGGAGATTATGAAATCAGTTGCTGATGCTTTGGAAGGGAGGACATATTCACCGAATGATATTAATATTTCGAACATTGTTGACGTTGCATGCCAAGCTGCTGGTTGTGGATATGAATATGGCACTGAATGGGGCAAACAGGTCTTTAAAACAAACATCTCAGATAGATTGATTTTAGAAAGATAA 1289 0.405 MANKNYSLPLNEKYRYKYSYKRVMDSLLLILLLLLLGYRVISVNNYSFPWFVAFLCELWFTFAWFFTLTTQWNPAVIKTYPDRLWQSVEEVPAVDLFVTTADTVLEPPIITVNTVLSLLAVDYPAHKLACYVSDDACSPLTFYALQQAFQFAKFWVPFCRKYELQLRAPLRYFSEVTTPNATPQFKQEWLQMKDMYDHLRSEIELDTFRKSNPCHGDFAAFENTQKTDHPSIIQTRVSGLITNAPFMLNVDCDMIVSNPNIVQHALCIFLDPKGEKEVAFVQFIQQFYATLKDDPFGNQMAILIKYLVAGLTGLQGPFYGGTNCFHRRKVIYGLSPENIEKGNGISEEELKQKFGASKEIMKSVADALEGRTYSPNDINISNIVDVACQAAGCGYEYGTEWGKQVFKTNISDRLILER 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03052 418 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 347 IPR029044 -
Pste1g03052 418 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 234 - -
Pste1g03052 418 Pfam Cellulose synthase 236 342 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pste1g03052 418 Pfam Cellulose synthase 94 234 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03052 Pste-Chr1 13586235 13593697 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g03052 1 402 Glycosyltransferase AT4G15320 41.667 7.63e-115 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g03052 1 13586235 13593697 Pste1g03052 1 13586235 13593697 ECH