Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g03032 CTCACGAGCCAGGTAGCAGTTGGGGTAACTGGGCCCCATATTCTCACTTCCAATCAAAACAGGCCACGTAAGCCATCGATTTTCACAAAGCAAGCAACCGACACCCCTTGATTTAACCACACCCATTAGCACCAAATAACAACCCAACAACATGAAACACACAATAAATCCCACCATTTTACCCGAGAACAAAAACCTGGTCTGCCACACTAACTCACAAACACACCGAAACAACACAACATAACATAATATAACATCGTAGGCAGCGTCTGTGTATGTTTCTCACTCTCTCTCTTTCTCTATCTGTACTGTCTGAAACACCAAAAGCCGCCATGGATTGCCGCATCTATGGCGTGACCTTCCTCCTCTGCCTCCTCCCAACCCTCACATTCTCCCTCTCACAGGGCCAAATCAACTCTAACTCAATCCTGGTGGCTCTGCTGGATTCGCATTACACGGAGGTAGCAGAACTGGTGGAAAAAGCCATGCTTTTACAAACTCTGGAAAACACGGTAATGAGCCACAACATCACAATCTTCGCACCCAGAAACGAAGCACTAGAGCGCGATCTCGACCCCGATTTCAAGCGCTTCCTTCTCGAACCCCGCAACCTTCAATCCCTCCAGACACTCCTCATGTCCCACATCGTCCCCAAAAGAATTCCCAAACCCGAATACAATACCGGGTCTAGCAAACCGGGTAACCCCACCCGATTCAAAACCCTCGCCCCAAGCCACCATCTCACACTCCAAACCATTAATTTAACTCACTGGAATGTCGACTCTTCCCGGGTTACCCACCCAGATTCGCTGACCCGTCCCGACGGAGTAATCCACGGCATCAACACTCTCCTTATTCCTCGCTCCGTCCAAGACGACTTCAACCGTCGCCGCAATCTCATCTCCATCGCCGCCGTCAAACCCGAAGCCGCCCCGGAGGTCGACCCACGCACCCACCGCTTAAAAAAGCCGGCGCCTCCGTCCCCCGCAGGCTCCCCACCGGTGCTCCCGATCTACGACGCGATGGCACCGGGACCATCCCTGGCTCCGGCGCCGGCGCCGGGACCAGGTGGACCCCACCACCACTTCAACGGCGAGAGACAAGTAAAAGACTTTATCCAAACCCTCCTCCACTACGGCGGTTACAACGAAATGGCGGATATTCTCGTAAACCTAACGTCGCTGGCAACGGAGATGGGGCGGTTAGTGTCGGAGGGTTACGTTTTAACGGTGTTAGCTCCCAACGACGAGGCCATGGCGAAGTTAACGACGGACCAGTTAAGCGAACCGGGTTCGCCCGAACAGATAATGTACTATCACTTGATACCCGAGTATCAGACCGAGGAGAGTATGTACAATGCCGTTAGAAGGTTCGGCAAGGTCCGTTACGACACGTTACGGTTGCCGCATAAGGTGACGGCGCAGGAGGCTGACGGCTCCGTTAAGTTCGGGCACGGTGAGGGGTCAGCGTATTTGTTCGACCCGGATATTTACAAGGATGGACGCATCTCCGTTCAGGGAATTGACGGCGTTCTGTTTCCGCCTCAGGAGGAAGAGGCTCGGCCCGTCACCCGAGCCCAGCCCACTAAGGTTGTCGTTAAGCAGAGAAGAGTCAAGACGGTGAAAAGACTTCTTCTGGTTTTGATCAAGGAAAATTGTTGGAAACAGCATGTTGGATGCTTGAAAGCTTTGGACAGAATTCTAGATTCATCTCTTGTCAATAAAGAGCTCTTATCTGGATGCTAGCAAGACTCGTCAAGAACAAAATACTGCACAGGAAATTCCGAAGATGTGAAAAGTCAACGGAATGTGAAGGCCAGGTTACTTGAAATGGTTAATATCAGCTGCTGCAATGAGTTTGGTTTTCCCACGTTTTTGTGATGCTCTTTTTCTTTCTCGTGGATTTGGGTTTTGGACTAGGGAACAAAAGATTCTCCAGTCTAGTAAAACAATATATAATATAGTGCCTATATTATATATGCAATTTAGATTCAATTAGTAGTGCTGCTTCAAATCGTTAGGAGGTTATGCTGGTGGGATGAGAAGGTTTTTATGTAATAAGATGGCAGGGAAATCTGTGCCCGATTCAGTAAGTAACTTTACGCAAAAAATGCAAATGGAAATACAGTAATAATCAATAAAATGATTCTTTTCTGTAAATTTCCTCTTCATCCCTCTGTATTACTTGTGATTACCACTGTGTAGAAAAATTACAATTTAGTTAGAATCAAAAGAAAAAATATTTTGCTTTAGTTTATAGTTGTGTTTTTATCAAGAAGGACTGTTGTATGTTGCAAATCATAATTTGTTTTTTCTT 2316 0.4771 MFLTLSLSLSVLSETPKAAMDCRIYGVTFLLCLLPTLTFSLSQGQINSNSILVALLDSHYTEVAELVEKAMLLQTLENTVMSHNITIFAPRNEALERDLDPDFKRFLLEPRNLQSLQTLLMSHIVPKRIPKPEYNTGSSKPGNPTRFKTLAPSHHLTLQTINLTHWNVDSSRVTHPDSLTRPDGVIHGINTLLIPRSVQDDFNRRRNLISIAAVKPEAAPEVDPRTHRLKKPAPPSPAGSPPVLPIYDAMAPGPSLAPAPAPGPGGPHHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVTAQEADGSVKFGHGEGSAYLFDPDIYKDGRISVQGIDGVLFPPQEEEARPVTRAQPTKVVVKQRRVKTVKRLLLVLIKENCWKQHVGCLKALDRILDSSLVNKELLSGC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g03032 489 ProSiteProfiles FAS1/BIgH3 domain profile. 47 193 IPR000782 -
Pste1g03032 489 Gene3D FAS1 domain 54 198 IPR036378 -
Pste1g03032 489 Gene3D FAS1 domain 270 423 IPR036378 -
Pste1g03032 489 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 38 450 IPR044654 -
Pste1g03032 489 SMART fasc_3 318 423 IPR000782 -
Pste1g03032 489 SMART fasc_3 86 196 IPR000782 -
Pste1g03032 489 FunFam Fasciclin-like arabinogalactan protein 16 272 423 - -
Pste1g03032 489 MobiDBLite consensus disorder prediction 217 270 - -
Pste1g03032 489 SUPERFAMILY FAS1 domain 50 196 IPR036378 -
Pste1g03032 489 ProSiteProfiles FAS1/BIgH3 domain profile. 277 405 IPR000782 -
Pste1g03032 489 Pfam Fasciclin domain 302 421 IPR000782 -
Pste1g03032 489 Pfam Fasciclin domain 59 195 IPR000782 -
Pste1g03032 489 SUPERFAMILY FAS1 domain 256 423 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g03032 Pste-Chr1 13506812 13510983 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02953 3 22269274 22276609 Pste1g03032 1 13506812 13510983 PCT