Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02957 CTGACCACTCATGTAAAAAGCATGTCATTCCATTTTGAGTACCAGCCATGCTAAGTAACTAAAAGTCTTCTTCTTTGTTTCTTGTTAAGCTGGCTGATCTTTCACGCAAGAAAGAATCCAAATAATCAGAAACTGGGAAATTACCGCAGAAACTATGGGTGTGCCTTCATTCTATAGATGGTTAGCTACCAAATATCCCAAGGTGGTGCAAGACGTGGACCCCACCATGCAAGATCCAAATGGAGTCAAATTTGATAACTTGTATCTTGACATGAATGCAATCATCCATCCATGTTTTCACCCTGATGATGATAATCCCAATATTCCACTGCCTACAACGTTTCAAGATGTTTTTAGGAATGTGTTTGACTACATTGATCGGCTTGTTGACACTGTTAGGCCTCGGAACCTCCTTTACATGGCTATTGATGGAGTTGTCCCACGTGCGAAAATGAATCAACAAAGATCAAGACGTTTTCGAGCTGCTAAGGACAAAGAAATTCAAGAAGCAGAGGAAGAACGGTTGAGGAAGAAATTCAAAATTGAAGGGAAACAAGTTCTTCCTAAGCAAGAATCTGAAGTGTCAGATTCCAACATCATAACACCTGGCACTGAGTTCATGCATGAACTTTCCAAGGCCCTCAAAAGCTATATCTCTTCAAAGATGTCCTGTGACCCGTTATGGAAGGATACTATGGTAATTCTCTCTGATGCTAATGTTCCTGGAGAAGGGGAACATAAGATTATGTCATACATAAGGAAACAGCGTAGTCTAGAAGAATATGATCCAAATACCAGCCACTGCTTATATGGCTCGGATGCTGATCTCATAATGCTTGCAATGGCAACTCATGAGCCTCATTTTTCAATATTAAGAGAGGATGTCTCTAATCAGCAGCACTACCCAAAATTTGCTGCTAAACCTTTCAAGTTTTTGCACATTTGGTTATTGAGGGAGTATCTTAAGATAGACATGAAGATAGAGGATCCTCCCAAAAATTGCAGCGTTGACTTAGAGAGAATAATTGATGATTTCATCTTCATGTGCTTTTTTGCTGGAAATGATTTTCTGCCGCACATGCCATCATTGGAAATTCACGAGGGGGCTATTGATTTGTTAATGACTGTTTACAAGAAAGAATTCAATAAACTTGGAGGATATCTTGTAGACATGAGCAGGATTGGGGAGAAAAATGCAGCTTTCATCAAGTTATCAAGAGTAGAAAAGTTGATACTTGCTGTTGGTACGTATGAAGATAAAATCTTTAAGAAAAGATGTGAACTACGAGAAAGAAAATTGCGAAGGCTTATTAAAGATAATGAGGATGCTGAGCGGGAAGAAAAGAATGCAACATGTTTCTCAGACGTTGAAGATGAAAGTACTTCTAATTGTACCCTTCTGATTAAGAATGCAGATTCAAAAAATATGCCTGTTTCGGTCAATCATCTTTTAGGTTCACATGCTGAAATTGAGCAGAATACAAAGGATTTAAAAGATGAATTGAAGAGATGTATCAGAGAAAAATGTGACTTATTTAAGAGTGGGGATTTCCTAATTGACAAGATAAAATTTGGAACACCTGGTCACAAAGAAAGATATTATAAAGTGAAGTTTTCTGTAGAGGGTCCTACTGACATTGAGTGCAAAAGGAAAGAAATAGTCCAGAAGTACACTGAAGGATTGGTGTGGGTACTTCAATACTATTTTTCATCAGTTGCTTCGTGGACATGGTTTTATCCATTCCACTATGGTCCATTTGCTTCGGACTTTAAGGGCATGGGTCAGCTAACATTAAAATTTGAAAAAGGTGTCCCATTTTCACCACTCTATCAACTTTTAAGTGTTCTTCCGCCAGCAAGTGCTCATGCCCTTCCAAAAGCCTATGCACAATTGATGCTAGATGAGCAGTCAAGAATTTCTGATTTTTATCCTCTAGGTGATTTCGAAGTTGATACTGAAGGAAAGCGTTTCGCATGGCAGGGAATCTGCAAGCTTCCGTGGATAGATGAAAGACAGCTTGTGGATGAAATTAGAGAGCTCAAGAATGAATTATCTGAAAGTGAGGCTATAAGAAATTCAGTCAAAGCTGATAGCTTGTTTGTTATAAGCATTAGCAAATTAGCGGAGAAAATTGGATCTCTATCTCAAGATAATAGCAAATTAGATGCCAGAATAAGCTGTGATGGCATTGGGGGTGTCATAAGTCTTTGCCCGGAGTTTGTTGAGAAGTGTTGCTCGAACATTTGTGACAACAAAGAAGATCGTGCCTTATGTGCCTATTACGAGCTTCCTGCTGGTAGTAATCATATTCCTCGCTTACTATCGGGTGTGAACCTTCCAGAGTTGACAATCTTTGAAGATGACATTATGGAAACAGAACTCTGGCATGAACGTCAGAATTATTATGGTCGTTTTGAGAGGGTGCAGAATCAGGATAAGTGGAAGAGCGAAAACACAAGCAATACTTCAAGGTTTTCCTCAAATTCCAGTAGGCAACATGCAAGAAACTTTTCATCAAATACACCATCCTTCAATTACAAAGCTGCTGGTGTTGGATGGGGTTCAGGTAGAGGGAAAAGTAGTGATGCAATGGCAAATGAGAGAGTGTCATTGCTGCCTCCATTTCATAAGCAACATAATGAGGCAGGATCTTATCACGACACTACTATAAGAGACACAAAATCTCAGCACTTAGTGGACAACGTTAGACAACTCAGAATATCAGAGTCAAATAATTTTGCGAGGCCTGGTGGCAGTTCTCAGTTTCGACCATATAATAATGGTCACATGAATCAGTCAAAAAATGCTCCTTATAATCAAGTTTCACAATATCAGACTGTGCCAGTTGGTCGGGGACTAGGTAGGGGTGCATCTAGTAGCAGTTCATTGCGGCCTCAATGGGGTCGTGGGCAATCTTACCAAGAGAAAGATCAAAATCGT 2941 0.3948 MGVPSFYRWLATKYPKVVQDVDPTMQDPNGVKFDNLYLDMNAIIHPCFHPDDDNPNIPLPTTFQDVFRNVFDYIDRLVDTVRPRNLLYMAIDGVVPRAKMNQQRSRRFRAAKDKEIQEAEEERLRKKFKIEGKQVLPKQESEVSDSNIITPGTEFMHELSKALKSYISSKMSCDPLWKDTMVILSDANVPGEGEHKIMSYIRKQRSLEEYDPNTSHCLYGSDADLIMLAMATHEPHFSILREDVSNQQHYPKFAAKPFKFLHIWLLREYLKIDMKIEDPPKNCSVDLERIIDDFIFMCFFAGNDFLPHMPSLEIHEGAIDLLMTVYKKEFNKLGGYLVDMSRIGEKNAAFIKLSRVEKLILAVGTYEDKIFKKRCELRERKLRRLIKDNEDAEREEKNATCFSDVEDESTSNCTLLIKNADSKNMPVSVNHLLGSHAEIEQNTKDLKDELKRCIREKCDLFKSGDFLIDKIKFGTPGHKERYYKVKFSVEGPTDIECKRKEIVQKYTEGLVWVLQYYFSSVASWTWFYPFHYGPFASDFKGMGQLTLKFEKGVPFSPLYQLLSVLPPASAHALPKAYAQLMLDEQSRISDFYPLGDFEVDTEGKRFAWQGICKLPWIDERQLVDEIRELKNELSESEAIRNSVKADSLFVISISKLAEKIGSLSQDNSKLDARISCDGIGGVISLCPEFVEKCCSNICDNKEDRALCAYYELPAGSNHIPRLLSGVNLPELTIFEDDIMETELWHERQNYYGRFERVQNQDKWKSENTSNTSRFSSNSSRQHARNFSSNTPSFNYKAAGVGWGSGRGKSSDAMANERVSLLPPFHKQHNEAGSYHDTTIRDTKSQHLVDNVRQLRISESNNFARPGGSSQFRPYNNGHMNQSKNAPYNQVSQYQTVPVGRGLGRGASSSSSLRPQWGRGQSYQEKDQNR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02957 929 MobiDBLite consensus disorder prediction 904 929 - -
Pste1g02957 929 PIRSF Exonuclease_Xrn2 1 255 IPR017151 GO:0004534|GO:0005634|GO:0006139
Pste1g02957 929 PIRSF Exonuclease_Xrn2 250 929 IPR017151 GO:0004534|GO:0005634|GO:0006139
Pste1g02957 929 Coils Coil 619 646 - -
Pste1g02957 929 Coils Coil 375 395 - -
Pste1g02957 929 CDD PIN_XRN1-2-like 36 270 - -
Pste1g02957 929 Pfam XRN 5'-3' exonuclease N-terminus 1 243 IPR004859 GO:0003676|GO:0004527
Pste1g02957 929 PANTHER 5'->3' EXORIBONUCLEASE 1 902 IPR027073 -
Pste1g02957 929 MobiDBLite consensus disorder prediction 858 929 - -
Pste1g02957 929 MobiDBLite consensus disorder prediction 763 790 - -
Pste1g02957 929 Pfam Xrn1 helical domain 285 738 IPR041412 -
Pste1g02957 929 Coils Coil 436 456 - -
Pste1g02957 929 Gene3D - 133 349 - -
Pste1g02957 929 MobiDBLite consensus disorder prediction 858 896 - -
Pste1g02957 929 MobiDBLite consensus disorder prediction 761 790 - -
Pste1g02957 929 Gene3D - 546 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02957 Pste-Chr1 12893443 12900387 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02957 1 12893443 12900387 Pste1g02957 1 12893443 12900387 ECH