Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02933 CAAATCTAAAGAACGAGTGTACCGGGCTCCAAACTCAGTAGTGATTTCAGCGAGGGTAGCCTCATCTTCCCCTTCTCAAATCAGCGTCACTTGGTCTTGCATCATTTTGATCCCAGCCTAGGTTCTGCTAAAACTAAAATGAAAAATAAATAATATAATATTGATTGATAGAAACAAACAGACATATTTAACCTTATATCGGCGTCGTGGTGTTCTATCCACTTGCCAATCGCAAGTTAGGAAACCCTAACAGATCTGATCTCACCTCGCTCCATCCATGGCTATGGCGTCAAGGAAACCTCGCGAGCGTGAAATGCTGTTCGACTCAGTCATCGCGCTCGTCTTCATCCTCGTAGCCTGCGTCGACCTCTGCGACGGCGCCACCGTGGTCGACGTCTACCGCCTCATCCAGTACGACATGTCCGGCGTTCCCTTCGGATCTCGTCTCGCCAGCCTCAATCACCACGCCGCTTCCCTCCACTTCTCTCCACACGCCGATCTCTCTCGCACCGTGCTCCTCATACCTCTTCGTGAACTCAACATGTCCTTTGTCAAAGAATATATTGCTGAAAGCAAGCCTCTTGGGGGTTTAATATTTTTGCTTCCCCGGATGTTCAGTTTCGAAAACAAAGATGGTTTGGGAAGTAATAATCAAGATGAGAGTAAAGAACTATTGAAGAATGTATTGGCTGAACTTGAACAAATACTTATACACGCCAACATACCTTACCCTGTTTATTTTGCATTTGAGAATGATAACATTGATGCTGTGTTAACTGATATCAAGAAGAATGATGTCACTGGTCAGCCTGCTACTGCAACAACTGGCGGATACAAATTTGTTGTTTCAGCTCCAGAACCAAAGAAAATTGTATCTCCTGCCATTACAAATATTCAGGGATGGTTGGCAGGACTAAAGGCAAATAATGATGCTCATCAATTACCCACCATTGCAATAGTGGCATCATATGACACCTTTGGCACTGCTCCTGCGTTGTCAGTGGGAAGTGATAGTAATGGAAGTGGCATTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCTCTCTTGTATTCCAATCCAAAGACAAGAGGACAATACAATCTGCTGTTTGGGCTAACATCTGGTGGACCTTACAACTACAATGGAACCCGGAAGTGGCTTCGGAGCTTTGATCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCATGGGAGAATGAATTGTGGATTCACGTGTCTAAGCCTCCAGAAAATGCCTTTATTAAGAAAATTCTGGAAGATTTTTCAAGTGTGGCTGATGAATTAGGCTTTAAAGTGAATCTGAAGCATAAGAAAATAAACATTTCCAATCCTCGAGTAGCTTGGGAGCATGAACAATTTTCAAGGCTGAGAGTTACTGCTGCAACTCTTTCTGAACTTTCTACGGCGCCCGAGTTGCTAGAAAATACTGGTGGTTTGGTTGATGGCAGGCATTTTGTTAATGAAGTGGCTATTGTCAGAAGTGTGAAATTAATTGCTGAGAGTCTTGCGAGGCATATTTATGGACATCAAGGAAAGAACATCCAGATCTTTGCAGACAACAGTAACTTGGCTGTCAATCCTTCTTATGTTCGATCATGGTTAAATATTTTGTCCCGAACACCTCGAGTAGCTCCATTTTTCTCAAAAGATGATCCTTTTGTCATGGCACTGAAAAAGGAATTAGAAGATCATACTGATGAAGTAAATCTGCATAGAGATGTGCTAGATGGGATGTTCACTTTCTATGATTCAACTAGGGCAAAGTTGAACATCTATCAGGTTGCGAGTGTAACATTTGACTTGCTGTTGCTTCTAGTATTGGGATCGTATTTAATTGTGCTCTTCAGTTTCTTGGTCATCACCACAAGGGGTCTTGATGATTTGATCAGTCTATTCCGGCGGCCTCCCTCTCGAAAAGTGAAAACTGCATAGTGGTTGTTAGGACTTTGCCTACGTAGTTCTGATGTTTTAAATAGTATCTTTAGGGTGGAAGTTTCTAATGAAAAACTGTAGTGGATTTTTTCCATCTTAGCCTGAAGTTGGTTGCTTTATTGGTTAAAAACAGCAAGCAGGATGTTTATTTTTGGCTGCGCGAAATTGACGATGCCAAAATTTTGATATTTTTTTTGTCCGTTTCCTTTGGCGCATTTTTTGTAGTGGAAAAAATTTGCTTAAATTCATGCCTTTTAACACAAGGCTGACTCGGGTTGTTGCTATAGGCTACGCTTTGATCATGTGTTAATTTCGGTTCAATAAAGCATTCATTTCGTG 2311 0.4193 MAMASRKPREREMLFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVKEYIAESKPLGGLIFLLPRMFSFENKDGLGSNNQDESKELLKNVLAELEQILIHANIPYPVYFAFENDNIDAVLTDIKKNDVTGQPATATTGGYKFVVSAPEPKKIVSPAITNIQGWLAGLKANNDAHQLPTIAIVASYDTFGTAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAFIKKILEDFSSVADELGFKVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTAPELLENTGGLVDGRHFVNEVAIVRSVKLIAESLARHIYGHQGKNIQIFADNSNLAVNPSYVRSWLNILSRTPRVAPFFSKDDPFVMALKKELEDHTDEVNLHRDVLDGMFTFYDSTRAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02933 564 PANTHER NICALIN 13 564 IPR016574 GO:0009966|GO:0016020
Pste1g02933 564 Coils Coil 475 495 - -
Pste1g02933 564 CDD M28_nicalin_like 137 430 - -
Pste1g02933 564 Gene3D Zn peptidases 126 425 - -
Pste1g02933 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Pste1g02933 564 Pfam Nicastrin 225 362 - -
Pste1g02933 564 SUPERFAMILY Zn-dependent exopeptidases 189 387 - -
Pste1g02933 564 PIRSF Nicalin 3 559 IPR016574 GO:0009966|GO:0016020
Pste1g02933 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02933 7 562 EF-hand Containing Proteins AT3G44330 72.809 0.0 842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02933 1 12669585 12678736 Pste1g02933 1 12669585 12678736 ECH