Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02906 TTTTTTGTGCAAATCCGTGGCCTTGGTTTTGGAATCAACTATGGAAAGATAGCCAACAATTTACCTCCTCCTTCTCAAGTGGCTGTTCTTATAAAATCTATGAATGTGAGTAGGATTAAACTCTATGATGCTGATCCAAATGTTCTTGTTCCTTTCTCCCAATCCAATGTGGAAGTTGTTTTAGGACTTGGAAATGAGTACCTAGAAAGCATGACAAACCCATTTAAAGCTCAAACTTGGATTCAGCAGCATGTTCTACCTTACCTTTCACAGACCAAAATCACTTGCATCGCTGTGGGAAATGAGGTATTCAATAGCAATGATGCTCAGATGATGTTGAACCTCCTTCCAGCAATGCAAACTGTGTATGATGCCCTTGTTAATCGTGGACTAGACAAACAAGTAACTGTCATAACTGCTCATGCCTTTAACATAATATCCAATTCCTACCCTCCTTCATCTGGGACTTTTAGGGAAGATCTTGTGCACTATATCCAACCCCTTCTTGATTTTCATGCTCAAATCAACTCACCTTTCTTCGTCAATATATACCCTTTCTTTGCATACAAAGACAACCCAAATGAGGTGTCCTTAAACTATGTACTTTTTCAGCCAAATCAAGGTATGGTTGATCCAAAGACTAATTTACATTATGACAACATGTTGTATGCTCAAATTGATGCTGCATATGCTGCCATCAAAGCAATGGGGCATACTGATATTCAAGTAAGGATTTCTGAGACTGGTTGGCCTTCTAAAGGTGACCCTGAAGAGGTTGGAGCTACACCACAAAATGCAGCATTGTATAATGGTAACTTGCTTAAAAGGATAGAGCAGAAGCAAGACACTCCTGCAAATCCGTCGGTTCCAATTGACATATATGTCTTTGCTCTTTTTAATGAGAATTTGAAGCCTGGTCCAACATCAGAGAGAAACTATGGCCTCTACTATCCTAATGGTTCTCCAGTTTATAACATTGCATTGGAGGGTTATCTCCCAGATAAATCCAATAATTTGACAGTCAATTTCCTTGTCTATATAATTACAAGCTTCATCTTTGCTTGGGAGCTTTCAAGA 1077 0.39 FFVQIRGLGFGINYGKIANNLPPPSQVAVLIKSMNVSRIKLYDADPNVLVPFSQSNVEVVLGLGNEYLESMTNPFKAQTWIQQHVLPYLSQTKITCIAVGNEVFNSNDAQMMLNLLPAMQTVYDALVNRGLDKQVTVITAHAFNIISNSYPPSSGTFREDLVHYIQPLLDFHAQINSPFFVNIYPFFAYKDNPNEVSLNYVLFQPNQGMVDPKTNLHYDNMLYAQIDAAYAAIKAMGHTDIQVRISETGWPSKGDPEEVGATPQNAALYNGNLLKRIEQKQDTPANPSVPIDIYVFALFNENLKPGPTSERNYGLYYPNGSPVYNIALEGYLPDKSNNLTVNFLVYIITSFIFAWELSR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02906 359 Gene3D Glycosidases 9 332 - -
Pste1g02906 359 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 328 IPR044965 GO:0004553|GO:0005975
Pste1g02906 359 SUPERFAMILY (Trans)glycosidases 10 326 IPR017853 -
Pste1g02906 359 Pfam Glycosyl hydrolases family 17 11 326 IPR000490 GO:0004553|GO:0005975
Pste1g02906 359 FunFam Glucan endo-1,3-beta-glucosidase 14 8 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02906 Pste-Chr1 12482468 12483681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02906 60 355 Glycoside Hydrolase AT2G27500 64.238 3.32e-151 427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03028 3 23066747 23071386 Pste1g02906 1 12482468 12483681 PCT