Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02881 GAGAGAGAGAGAGAGATTAACGGTCCTGTTGAGACTTGGTCAGCATTGTCAATGGTGCCTCACTGTCTCGTATCCAAAACCAACTATTTTCAGGATTGCGGATTTAGATAACTCCCCTCTCTCTCTTTCTTTCTCCTTGCTTCTCTTCCTTTTCAATAGGGCATTTGGGAGTGTCTTAATTTGTTTCCATTCTTGCTGTGTATGATATGATTGCTTGATTCGTCGCTCATACACATCAACTCCTGCAAGGCCAGAGGAAACAATCTACTCAAAAGACACAATGTCTGGAACCATGTCTCCCAAAGGCTCTTTCAAGAAGAAAGCAATCAATGCGTCAAGCATGCTCAGGAATTCTCTGACGAGAAAGGGTAGGCGAAGCAGCAAGGTCATGTCCGTTGAGATTGAGGATGTCCATGATGCTGAGGAGTTGAAAATAGTTGATGAGTTCCGTCAAGCTCTTATTTTGGAGGAGCTGCTTCCTGCAAAACACGATGATTATCACATGATGCTTAGATTCCTCAAGGCAAGGAAATTTGATATTGAGAAAACAAAGCAGATGTGGTCTGAAATGCTCAATTGGAGGAAGGAGTTTGGAGCTGACACTATTGTGGAGGACTTTGACTTCAAAGAAATTGATGAAGTCTTACAGTATTATCCCCAAGGACATCATGGAGTGGATAAAGATGGAAGACCTGTGTACATAGAGAGGCTAGGCCAAGTCGATGCGGGGAAAATGATGCAAGTCACAACCATGGACCGTTATATCAAATACCACGTAAAGGAGTTTGAGAGGACATTCGATATGAAGTTTGCAGCTTGTTCAATTGCTGCAAAGAAGCACATCGACCAAAGTACAACTATCCTGGATGTGCAGGGAGTGGGGCTAAAAAGCTTCAACAAACATGCTAGGGAACTTGTTACTCGCCTTCAGAAGATTGATGGTGACAACTACCCAGAGACCTTGAATCGTATGTTCATCATCAACGCAGGTTCTGGATTTAGAATACTGTGGAACACCGTAAAATCATTCCTTGATCCTAAGACCACGGCCAAAATCAATGTCCTTGGCAACAAATTTGAGAGCAAATTGCTAGAAATAATTGATGCAAGTGAGTTGCCTGACTTTTTAGGAGGTACTTGTACATGTGCTGATCAAGGAGGCTGTATGCGCTCGGATAAGGGCCCGTGGAAGGATCCAGAAATCATAAGCGTAGGACTAATGTCCAGTTTATTTGCCTTTTCTCCCCTTGTTTCTCTACTTGTAACTTCAATTGATAATTTATGGACGATGTATGGAACCAGATTCCTAAACTTATTGTATTATATGGAATGGCAGATGGTTCTCAACGGTGATCACAAATGTTCAAGAAAAAGTGAGTCAGGCGGCCAGGAAGAGAAAAGCCATTCTGAGGAACCCAAGCCTTCCAAAGAGGAAAATCCCATCTCCCAGCTTTCTCCAGTTCCTGAAGAGGTACCTGCTACTAAAGCTTCCCCGCCCACGGACTTGACCCCAACGGCTGATAAAGCTTCCCCGCCTAAGGAATTAGCCCCAGTGATTCAAAAACCTGCTTCCATAAAAGTTGACGAGAAAGCTTCCATGCAAGAGGACTTAGCCCCAATGGTTGATAAAACTGCTTCGAAAAAAGTTGACAAGGCTGACCCAACTGCAGCATCAACAGAGTTCGCGACTGTGATGAAGCGCATTGCTGAGTTGGAGGCGAAAATGGCTAACATCAATAATCAGCCTACTGCTATGCCACCTGAGAAGGAGAAAATGCTCAATGCAACTATAACTCGAGCTGATGACTTGGAGAAAGAACTTATGGCCACCAAGAAGGCTCTGGAGGATTCACTTGTTAAGCAAGAAGAGCTTTCGGCTTATATTGAAAAGAAGAAGAAGAAGAAGAAGAGATTTGTATTACTTCTTTTAAAGAGCAAATTCGTGGATATGCCCAGACAAGAGGTCCAGAGATTAACGGGGGATTAGCTTTTAGTTACAGCCTTTCAGGAGACTTCCCAAATGCCCTCTTACATAAATGTTCCAACATGCGAACTAGTAAAGGATACGTTCAATATATGAATTATGCTAATCAGATTTGTTTTGTCTCTATTAGGATAGGACTTACTCTCTGTGTATAGTATATATATAGGGCCGTGGACTGCACATTTATGTAAAGCCAGCCCTATTATGTCCGCACTTAATCAATCAAAATATCTAGTACAAAATTAGAGAGTATGTTTGAC 2244 0.4251 MSGTMSPKGSFKKKAINASSMLRNSLTRKGRRSSKVMSVEIEDVHDAEELKIVDEFRQALILEELLPAKHDDYHMMLRFLKARKFDIEKTKQMWSEMLNWRKEFGADTIVEDFDFKEIDEVLQYYPQGHHGVDKDGRPVYIERLGQVDAGKMMQVTTMDRYIKYHVKEFERTFDMKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKFESKLLEIIDASELPDFLGGTCTCADQGGCMRSDKGPWKDPEIISVGLMSSLFAFSPLVSLLVTSIDNLWTMYGTRFLNLLYYMEWQMVLNGDHKCSRKSESGGQEEKSHSEEPKPSKEENPISQLSPVPEEVPATKASPPTDLTPTADKASPPKELAPVIQKPASIKVDEKASMQEDLAPMVDKTASKKVDKADPTAASTEFATVMKRIAELEAKMANINNQPTAMPPEKEKMLNATITRADDLEKELMATKKALEDSLVKQEELSAYIEKKKKKKKRFVLLLLKSKFVDMPRQEVQRLTGD 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02881 568 Pfam CRAL/TRIO, N-terminal domain 62 95 IPR011074 -
Pste1g02881 568 Gene3D - 105 313 IPR036865 -
Pste1g02881 568 FunFam SEC14 cytosolic factor 105 316 - -
Pste1g02881 568 SMART CRAL_TRIO_N_2 72 97 IPR011074 -
Pste1g02881 568 MobiDBLite consensus disorder prediction 360 384 - -
Pste1g02881 568 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 9 539 - -
Pste1g02881 568 CDD SEC14 118 286 IPR001251 -
Pste1g02881 568 Coils Coil 500 531 - -
Pste1g02881 568 Pfam CRAL/TRIO domain 123 285 IPR001251 -
Pste1g02881 568 SUPERFAMILY CRAL/TRIO domain 117 308 IPR036865 -
Pste1g02881 568 Gene3D - 14 104 - -
Pste1g02881 568 PRINTS Cellular retinaldehyde-binding protein signature 244 263 - -
Pste1g02881 568 PRINTS Cellular retinaldehyde-binding protein signature 277 286 - -
Pste1g02881 568 PRINTS Cellular retinaldehyde-binding protein signature 75 97 - -
Pste1g02881 568 Coils Coil 468 488 - -
Pste1g02881 568 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 117 291 IPR001251 -
Pste1g02881 568 SMART sec14_4 117 288 IPR001251 -
Pste1g02881 568 MobiDBLite consensus disorder prediction 360 439 - -
Pste1g02881 568 SUPERFAMILY CRAL/TRIO N-terminal domain 46 113 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02881 Pste-Chr1 12350374 12355772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02881 53 282 Acyl Lipid Metabolism Gene Families AT5G47730 28.033 5.47e-18 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02881 1 12350374 12355772 Pste1g02881 1 12350374 12355772 ECH