Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02854 ATAGTGTGTGTGTGAGAGACTGAAAACAAAAGATGAAGCATTTAGCCTTGGTGTTTCTTGTGACCATTTTGGTCCCTCAGGAGTGTTTCCATTACACCGTGGAAGCTAGCGATGATTTCGTTAGAACCAGAGGTATCCATTTCATGCTGAATGGATCCCCTTACTATGCAAATGGGTTCAATGCCTACTGGTTAATGTACGCAGCTTCTGACCCATCTCAGAGGTTCAAGGTTTTAAATGCTTTCCGAGAAGCAGCAGGTCATGGTCTTACTGTTGCTAGAACTTGGGCATTCAGTGATGGTGGTTATAGGCCCCTACAATATTCCCCTGGCTTCTATAATGAGCAAATGTTCTCAGGGTTGGATTTCGTTATATCCGAGGCCAGAAAACACGGAATTAAGCTCATACTGAGCTTGGTGAACAACTATGAAAACTTTGGAGGCAAGAAGCAGTATGTGAACTGGGCTAGAAGTCACGGACAGTACCTTACTTCAGATGACGATTTCTTTAGGAGCCCTGTTGTTAAGGGTTACTACATGAACCATGTCAGGACTGTTCTGAACAGATACAACAGGTTTACTGGTATTCATTACAAAGATGACCCGACAATCATGGCCTGGGAGCTCATGAACGAACCTAGGTGCACAACGGATCCTTCAGGGAGGACTATTCAGGCGTGGATCGCGGAAATGGGTTGGTTTGTAAAGTCCATAGATAGGAAGCACTTATTGGAGGCTGGACTGGAAGGGTTTTACGGAGAATCCACACCACAAAGAAAGAGAATGAATCTGGGTTTCGACATAGGGACAGACTTCATAAGAAATAACCGTATCCGGGCCATTGATTTTGCAACAGTCCACTGTTACCCGGACCAATGGATGTCGAACTCAAACGAGCAGTATCAGCTATCATTCTTGAACAAGTGGGTGAGTGCTCACTTGATAGATGCAGAGTATGTTATAAAGAAGCCAATACTGGTGGCAGAATTTGGGAAGTCGATAAGAGGAAGGGGTTGGGGTTACTGGGAGAGGGATAAAGTGTTCAATTCAGTGTATTACAAAATATATGCATCCGCAAGAAGAGGAGGGGCAGCAGGGGGAGCATTGTTCTGGCAGCTTCTGACAGAGGGAATGGAGTCTTTCCAAGACGGTTACGGAATAATGCTTGGCCAGAGTTCCTCTACGGCCAATCTCATTGCTCGCCAGTCCCGCAAGCTCTACCTCATTCGCCACTCCACCCAACTCATCATATACTAACTTACACTTACACCTCTACACATCATATACATACATATAGTTTAGTTACTTTTATAAACAAGCCCCCACCACCACATCAATCACACTCTTTTCATTAACTTACACTAAAGTTTCTCAATGCTGTCCATCTCTCTTCACTTTCAAAACAAATGTAACTGTTAAATTAAAACTGTGTCTTAATATCAACTTA 1446 0.4371 MKHLALVFLVTILVPQECFHYTVEASDDFVRTRGIHFMLNGSPYYANGFNAYWLMYAASDPSQRFKVLNAFREAAGHGLTVARTWAFSDGGYRPLQYSPGFYNEQMFSGLDFVISEARKHGIKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNRFTGIHYKDDPTIMAWELMNEPRCTTDPSGRTIQAWIAEMGWFVKSIDRKHLLEAGLEGFYGESTPQRKRMNLGFDIGTDFIRNNRIRAIDFATVHCYPDQWMSNSNEQYQLSFLNKWVSAHLIDAEYVIKKPILVAEFGKSIRGRGWGYWERDKVFNSVYYKIYASARRGGAAGGALFWQLLTEGMESFQDGYGIMLGQSSSTANLIARQSRKLYLIRHSTQLIIY 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02854 407 SUPERFAMILY (Trans)glycosidases 29 387 IPR017853 -
Pste1g02854 407 PANTHER - 4 399 IPR045053 GO:0004553
Pste1g02854 407 Pfam Cellulase (glycosyl hydrolase family 5) 73 322 IPR001547 GO:0004553|GO:0071704
Pste1g02854 407 FunFam Mannan endo-1,4-beta-mannosidase 6 26 399 - -
Pste1g02854 407 Gene3D Glycosidases 25 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02854 Pste-Chr1 12095846 12098021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02854 1 399 Glycoside Hydrolase AT5G66460 65.337 0.0 548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02854 1 12095846 12098021 Pste1g02854 1 12095846 12098021 ECH