Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02827 ATGAGAGACATAGTTTCTTGCTTCAGCGAGAACGCAGTGAACGTGTCTCACTCCTCAATCTCGTGTTCCAGTTACGCAAACAAGGGCTGCATCTCTTCTTCCATTGCACCCTCCACCCCAAACTCAATCTCCAGCATCTACAAACTTATCCTCTCCACGCTCAAGCAAGTTCTCATCACAGTTACATGGTGTAGGACCCATTCCAACCAAGGACTCACCATAACCTTCAACAACGAGGACCCTCCACCCTTCAGACTCAACACCAATTCACGCTTCTTCAGAAAGAAAAAAGGCACCAAAATCCTGGAACCCTCTTCCCCTGACTCTGAGTCATCCAAGATTGAAATCATATGGGATCTCTCAAGCGCAAAGTACGAATCAGGACCCGAACCTGTTCAAGGCTTTCACGTTGTCATCATCATTGACTCCGAAATAGGCTTGGTTCTGGGTGACACTAGTGCTGAAGAAACACTTTCCAAGAGGCTCAATTTCAAAAGCAACAGCACCCCTTTGGCTAAGGTGTCACTGCTATCACGGAGGGAACATTGTACGGGGAACACAGTCTACAGCACCAAGGCTCAGTTCTGCAACACCGGCACGTGGCACGATGTCATGATCAGATGCAGCGTGGAGAAGGAGAATGAAGGGTTGTTCAGGTCACCGGTTCTGTGCGTGTGCATTGATAACAAGACTGTGATTCGTGTGAAGAGGCTGCACTGGAATTTTAGGGGGAACCAGACCATTTTTGTTGATGGGTTACTCGTGGATTTGCTTTGGGATGTTCATGACTGGTTCTTCAACCCTTCTTCTGGCTATGCGGTTTTCATGTTCAGGACTAGGACTGGCATGGATAGCAGGTTGTGGTTGGAGGAAAAATCTCCACACAAAGATAAAGACAGGGTTCCCTTCTCCTTGTTCATCTATGCCTGTAACAATTCATAA 942 0.4735 MRDIVSCFSENAVNVSHSSISCSSYANKGCISSSIAPSTPNSISSIYKLILSTLKQVLITVTWCRTHSNQGLTITFNNEDPPPFRLNTNSRFFRKKKGTKILEPSSPDSESSKIEIIWDLSSAKYESGPEPVQGFHVVIIIDSEIGLVLGDTSAEETLSKRLNFKSNSTPLAKVSLLSRREHCTGNTVYSTKAQFCNTGTWHDVMIRCSVEKENEGLFRSPVLCVCIDNKTVIRVKRLHWNFRGNQTIFVDGLLVDLLWDVHDWFFNPSSGYAVFMFRTRTGMDSRLWLEEKSPHKDKDRVPFSLFIYACNNS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02827 313 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Pste1g02827 313 PANTHER EXPRESSED PROTEIN 4 310 IPR008586 -
Pste1g02827 313 Pfam Plant protein of unknown function (DUF868) 39 310 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02827 Pste-Chr1 11889151 11890092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02827 1 309 EF-hand Containing Proteins AT5G28150 36.190 1.98e-54 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03076 3 23583601 23584518 Pste1g02827 1 11889151 11890092 PCT