Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02797 GTTAAACCCTAGCAAAGGGTTTAAGCTCGTCGTAACGTAGACAACGTACCCTTCTTCATGATCTATTCGGAAGGGGCATTCTAAGCCATGGCTGCTGCAAGGTTAACCTCATGCGTGGCCGTAACTTCCGCTGCGGTGGCTTCCATGTCCACCTTCTCCGATCGTGCCTCCGCCGACTCTTACTTTCGATTCCCTTTCTTCTCTTCTTCACCTTCCAATGCGCCGGCATCGCCCAACCACCCTTCCGACTCCGAGGCCGAGCCCCTGGCACCCGACGAACCTAAAAAATCGGGTTTCGACCCGGAATCATTGGAAAGAGGAGCCAAAGCTCTCCGTGAAATCAATAGTTCTCCCTACTCCAAACAGCTGTTTGATTTAATGCGAAAACAGGAGGAAACTCGTCTCGCTGAATTAGATGCTGAGAAAGTTAATTACGAACTTATTCAGTCTCAAGGAGATATTGAAAGGCAGCGGAAAATGGCAGAGGAACAACGTAATCTAATACAAGAGCAAGCCCAGAGACAGGCCCAGGTGCTGAGATATGAAGATGAATTGGCAAGGAAAAGGATGCAGACAGATCATGAAACCCAAAGGCAACATAATGTTGAATTCGTCAAGATGCAAGAGGAATCTTCTGTAAGGCAGGAACGGGCTAGACAGGCTACAGAAGAACAGATTCAATCTCAGCAGCGTCAGACTGAGAGAGAGAGAGGTGAAATAGAAAGAGAAACTATTAGAGTTAAGGCAATGGCGGAGGCCGAAGGCCGAGCCCATGAAGCTAAACTGACTGAGGATCATAACAGGAGAATGCTTATAGAACGAATGCAAGGTGAAAGAGATAAATGGCTTGCTGCAATTAACACAACGTTTAGTCATATTGAAGGTGGTCTAAGGGCCTTATTGACTGATAGGGACAAACTGCTTATGACTGTTGGAGGAGCTACTGCACTAGCAGCAGGAGTATATACAACTAGGGAAGGTGCTAAAGTCACTTGGGGCTATATTAATCGGATTTTGGGACAGCCATCACTGATCAGGGAATCATCCATGGAAAAATTTCCAGGATCAAAGATCATTTCTCAAATCAAAAGTAAAGTTCTAAATAATAGTACTTTGGCTGGGGCAGAAAAGCCAATTGGCAGTAAAAGTGGTCTTGGAAATGTAATCCTCCATCCATCGTTGCAGAGAAGAATTGAGCATCTTGCCCGTGCAACATCAAATACCAAAGCCCATCAGGCTCCATTTCGTAACATGCTTTTTTATGGGCCTCCTGGCACTGGTAAAACAATGGTTGCAAGGGAAATAGCCAGAAGATCGGGTTTGGATTATGCCATGATGACTGGAGGAGATGTTGCACCTCTGGGCGCACAGGCTGTTACAAAAATTCATGATATATTTGATTGGGCCAAGAAATCTAGAAAAGGCCTATTGCTTTTCATTGATGAGGCAGATGCTTTCCTTTGCGAGCGTAACAGCTCACACATGAGTGAAGCCCAACGAAGTGCTCTAAACGCATTGCTCTTCAGAACTGGTGATCAGTCGAGAGACATAGTACTTGTCCTTGCGACAAACAGACCAGGGGATCTTGATAGTGCAGTTACTGATCGCATTGATGAAGTGATTGAATTCCCACTTCCAGGAGAGGAGGAACGTCTAAAGTTATTGAAGCTGTATTTAAACAAGTATCTATGTGATGACAATAATGGCTCCAAGGGAGGCTTCTTGCTGAAGAAACTGCCCCAGAAGATTACCATAAAAGATTTATCCGAAGATGTTTTCAGAGAGGCTGCCAAGAAAACAGAGGGATTTTCTGGCCGTGAGATTGCCAAACTCATGGCCAGCGTCCAAGCTGCTGTCTATGGGCGCCCAGACTGCATCTTGGATTCCCAGTTGTTTAAAGAAATTGTAGATTACAAGGTTGTGGAACATCATCAACGATTAAAACTAGCAGCAGAAGGTGGTCAGTATGATTTGTTTGAGCATTAATTTGCATCCCCATTTTGACCTGCTATGTGAGTTTTTTGTTCTTCATCATGTTATTTGTGCCATTATTCGTAGAAAGCTTCACCTAGATGCATTTTGTTAGCCAAATTTGTAGGATACTTCGGCTTCATTAACGATTTACTTTCATGGGAAGGCGGTTTTAGCCTTTAATGACTTGATGCGGTATTCAAGCAGTACCTTCCACTGAGCAAGAAACTAGGTTTTGAAAGCATAGAAGTCAAATTACCTTGATTAATAAATTTATAGAATATGCTC 2259 0.44 MAAARLTSCVAVTSAAVASMSTFSDRASADSYFRFPFFSSSPSNAPASPNHPSDSEAEPLAPDEPKKSGFDPESLERGAKALREINSSPYSKQLFDLMRKQEETRLAELDAEKVNYELIQSQGDIERQRKMAEEQRNLIQEQAQRQAQVLRYEDELARKRMQTDHETQRQHNVEFVKMQEESSVRQERARQATEEQIQSQQRQTERERGEIERETIRVKAMAEAEGRAHEAKLTEDHNRRMLIERMQGERDKWLAAINTTFSHIEGGLRALLTDRDKLLMTVGGATALAAGVYTTREGAKVTWGYINRILGQPSLIRESSMEKFPGSKIISQIKSKVLNNSTLAGAEKPIGSKSGLGNVILHPSLQRRIEHLARATSNTKAHQAPFRNMLFYGPPGTGKTMVAREIARRSGLDYAMMTGGDVAPLGAQAVTKIHDIFDWAKKSRKGLLLFIDEADAFLCERNSSHMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEEERLKLLKLYLNKYLCDDNNGSKGGFLLKKLPQKITIKDLSEDVFREAAKKTEGFSGREIAKLMASVQAAVYGRPDCILDSQLFKEIVDYKVVEHHQRLKLAAEGGQYDLFEH 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02797 632 Coils Coil 125 145 - -
Pste1g02797 632 ProSitePatterns AAA-protein family signature. 488 507 IPR003960 GO:0005524|GO:0016887
Pste1g02797 632 SMART AAA_5 385 518 IPR003593 GO:0016887
Pste1g02797 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 372 612 IPR027417 -
Pste1g02797 632 PANTHER PUTATIVE ATP-ASE 20 624 - -
Pste1g02797 632 MobiDBLite consensus disorder prediction 161 192 - -
Pste1g02797 632 MobiDBLite consensus disorder prediction 41 74 - -
Pste1g02797 632 MobiDBLite consensus disorder prediction 161 210 - -
Pste1g02797 632 Coils Coil 99 119 - -
Pste1g02797 632 FunFam ATPase family AAA domain-containing protein 3 343 533 - -
Pste1g02797 632 Pfam ATPase family AAA domain-containing protein 3, N-terminal 63 317 IPR021911 -
Pste1g02797 632 Coils Coil 183 214 - -
Pste1g02797 632 Gene3D - 335 536 IPR027417 -
Pste1g02797 632 Pfam ATPase family associated with various cellular activities (AAA) 389 516 IPR003959 GO:0005524|GO:0016887
Pste1g02797 632 MobiDBLite consensus disorder prediction 57 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02797 Pste-Chr1 11651871 11657987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02797 365 592 Miscellaneous Gene Families AT5G53170 29.289 8.95e-15 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02797 1 11651871 11657987 Pste1g02797 1 11651871 11657987 ECH