Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02736 GTGAGTGGCGGTGGCTGTGTGGCTGGATGTACTATAAGATGGAGAAAAGAGGATTATATATTTTGCTTCCGCCACCAACCAACCACTAATTCACACACATTCTCTGTTGCATTATCACAAACACCTTCACCACGATGCACCTAGCAATGGCCGCCAACGCTGTCGTTTCCCCGTCGCCCTTCCAACCTCATCCTCTTCTCCGTTCATCCTTCTCCGGCGTCTCCGTTAAGCTCACTCCCCAACTCTTAACCCTTTCTCGCTCGAAGCCCCTCACTGTCCTCGCCGCCACCAAGAAGGCCGTCGCCGTCCTCAAGGGTACCTCCGCCGTTGAAGGCGTCGCTACGCTCCTCCAAGAAGACAATGGTCCGACAACAGTTACTGTTCGTATTACTGGCCTTACACCAGGACTTCATGGTTTTCACCTTCATGAGTATGGTGATACCACAAATGGGTGTATTTCAACAGGAGCACATTTTAATCCTAATAACTTGACACATGGTGCTCCTGAAGATGAAGTCCGTCATGCGGGTGACCTGGGAAACATAGTAGCTAATGCAGATGGGATTGCAGAGGCTACAATTGTGGATAGTCAGATACCACTCTCTGGACCTAATTCAGTAGTTGGAAGAGCCTTGGTGGTTCACGAGCTTCAGGATGACCTTGGAAAGGGTGGGCATGAACTTAGTTTGACAACTGGAAATGCTGGTGGAAGATTAGCATGTGGTGTGGTTGGTTTGACTCCAGCATAATTAGTGCAGCGAATGTTTTTGAAGCCGTGGTGTTATTTTATCTGTAGTTATGTTCCCTATGTAGCATGGTGACTCACTGTTATTTGTTTTCTTCAGTTACCAATGTAAACTTTAAGCATAATGTCGTAAAGATGAGCGTGCAAATGAATCGTGAACGCATGTTAGTCCTTTACTGGAGAATGATTCACCATACAACCCGGTGTGTACTCCCCAATAAAATTCATCATGCTCTCAGGTTTTTATTCCCCAGTGAAATTGATTTCTGTAGGCCTTGTTGCTAGCTAGAGGATGAACCTACGTTGATATTCTATAGTATTGGTGCAAGTGCAGCGACCGGTTACTTGTGTCTAGATGTTCCTTTTCTTTTTGGCAATGCTGGTAATAAATCCAGCCTAGCTCTTCACTGAAGCCATGTTGCTAGTGACTCTATATGTTCGTATATTCATTTTAGGTTTGGA 1207 0.4573 MHLAMAANAVVSPSPFQPHPLLRSSFSGVSVKLTPQLLTLSRSKPLTVLAATKKAVAVLKGTSAVEGVATLLQEDNGPTTVTVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNNLTHGAPEDEVRHAGDLGNIVANADGIAEATIVDSQIPLSGPNSVVGRALVVHELQDDLGKGGHELSLTTGNAGGRLACGVVGLTPA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02736 204 FunFam Superoxide dismutase [Cu-Zn], chloroplastic 50 203 - -
Pste1g02736 204 PRINTS Cu-Zn-superoxide dismutase family signature 149 171 IPR001424 GO:0006801|GO:0046872
Pste1g02736 204 PRINTS Cu-Zn-superoxide dismutase family signature 94 116 IPR001424 GO:0006801|GO:0046872
Pste1g02736 204 PRINTS Cu-Zn-superoxide dismutase family signature 174 200 IPR001424 GO:0006801|GO:0046872
Pste1g02736 204 PRINTS Cu-Zn-superoxide dismutase family signature 130 139 IPR001424 GO:0006801|GO:0046872
Pste1g02736 204 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 94 104 IPR018152 -
Pste1g02736 204 Gene3D Superoxide dismutase, copper/zinc binding domain 49 203 IPR036423 GO:0006801|GO:0046872
Pste1g02736 204 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 30 201 IPR024134 GO:0005507
Pste1g02736 204 Pfam Copper/zinc superoxide dismutase (SODC) 65 199 IPR001424 GO:0006801|GO:0046872
Pste1g02736 204 CDD Cu-Zn_Superoxide_Dismutase 53 196 IPR001424 GO:0006801|GO:0046872
Pste1g02736 204 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 188 199 IPR018152 -
Pste1g02736 204 SUPERFAMILY Cu,Zn superoxide dismutase-like 55 201 IPR036423 GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02736 Pste-Chr1 11158907 11164026 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02736 1 11158907 11164026 Pste1g02736 1 11158907 11164026 ECH