Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02660 ATGATGGAGCCTCGCAAATCTTCACCATTATCGTGGGTCTTCTTGACCTTCTTCCTTACCATTTCCTTGTGTGGAGTGAATGCATTAAGTGAAGATCACCATGCCAAGCCTCACGTGGGACCTGTGGTGGAAAAGAATCAAAGGAGGACATTGCTTGTCACTGAATTTGGAGAAGTCACTGCTATTGACATCAAGGAAGGACAAAAGGAATTACCCTATCATCTTCAGTTCATCACACTGGACCCTAACTCGCTATTTCTTCCTGTGCTTCTCCATGCAGATATGGCACATGATGATGGCACTACCACTATCCCTTTACGCGAAGGAGATGTATGCAGTCTCAGTGAAGGATCTGTTTTCTATATACAGAGCAACTTAGAGGCTGAGAGAAGGAAACTTAGGATTTATGCAATATTCACCAATACAGACGATAATACTTTCGATCCATCAATCGGTGCTTACTCAAGGATCAACGAACTGGTCAAAGGCTTTGATAAGGCAATCATGCAAGCAGCTTTAAAGGTGCCGGATGATTTGATTAAAGTAATCACTAACAAGAGAAACACCCCAGCTATAGTGCATGCGGTTTCAGAGAAGAGGAATATTGTCCAGGGGCTAGAGGCTATTATTTTAGAAAGCTTTTCAGGCGTTGTGGCATCCAACTCAAAGAAAGTCAAAACATACAACATCTTTAGTCACGATCCTGACTTCAGAAATCGTTATGGTTGGAGCATAGAAGTGACCAAAAAGCAACTAAAATCATTGAAGCGGACAAACATAGGATTTTTTATGGTGAATTTGACCAGGGGATCAATACTGGGGCCTCATTGGAACCCAAAGGCAACAGAGTTGACAATGGGATCAGAAGGGAGAGGTATGGTCAGAGTAGTATGTGGAAGCGGCAATGAAGAAGAGACAGAATGCCAAAACATGAGGTTTAAGGTCAAGGAGGGTGACGCTTTTGTGGTATCTAGGTTTCAACCCATGGCTCAGATGTCATTCAACGATGGACCGTTTGTTTTTGTTGGCTTCAGCACTTCAGCAAAGAGAAATCATCCTCAGTTTTTGGCCGGAAAGGGATCATTGCTTGATATTCTAGACAAGCAGATACTGGCTACCTCTTTCGGTGTGAGTAACAGAACCATTAAGCGGCTTTTGCGTTCTCCTGCTGATTCCATCATTTTCGGGTGCAGTTCCTGCGCGGAGGAAGAGGAGAAGATAGTGAAGGAGGAAGATGAGAGAAAGAGAAGAGAGGAAGAGGAGAGAAAAAGAGAGGAGGAGGAGGAGGAAGCCAGGAAAAGAGAGAGGGAAAGGAAACGTGAGGAGGAGGAAGCTAGGAGAGAAAGGGAAAGAGAAGAAGAAAAGGAGAGGGAAGAAGAAGAAGCTAGAAGGCAACAGGAGGACAGAGAAAGGAAGCGGGCTGAGGAGGAAGCTAGGAGAGAACGGGAAAGACAAAGAGAAGAGGAAGCAGAAGCTGCAGCTGCTGCTGCAGCTGCCAAGAGAGAGCAAGAGAAGAGGGAAAGGAGGAGACAAGAGGAGGCAGAAAGGGAGCAAGAACAAGCTAGAAAAGAAGCAGAAGAAGCAGCAAAGAGGGAACAGGAACAAGCTAGAAGAGAAGCAGAAGCAGCAGCTAAGAAAGAACAAGAACAAGCTAGAAGAGAAGCAGCAGCAGCAGCAAAGAGGGAACAGGAACAAGCTAGGAAAAAAGCAGAAGGAGCAGCAAAGAGAGAACAAGAACGTGCTAAAAGAGAGCAAGAAAAGAGGCGACAAGAGGAGGAACAAAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGGGTGGACAAGGAGAGAGAAGGGGAAAACTCCAGAAGGAGTAGAATGGGAGCAAGAAGAAGCCATGAGGCCGCAAATCCACCGGAGCAGTTTTCATGGAAGGAGAGTTTTGAAAACAAGGAAACTATAA 1944 0.4511 MMEPRKSSPLSWVFLTFFLTISLCGVNALSEDHHAKPHVGPVVEKNQRRTLLVTEFGEVTAIDIKEGQKELPYHLQFITLDPNSLFLPVLLHADMAHDDGTTTIPLREGDVCSLSEGSVFYIQSNLEAERRKLRIYAIFTNTDDNTFDPSIGAYSRINELVKGFDKAIMQAALKVPDDLIKVITNKRNTPAIVHAVSEKRNIVQGLEAIILESFSGVVASNSKKVKTYNIFSHDPDFRNRYGWSIEVTKKQLKSLKRTNIGFFMVNLTRGSILGPHWNPKATELTMGSEGRGMVRVVCGSGNEEETECQNMRFKVKEGDAFVVSRFQPMAQMSFNDGPFVFVGFSTSAKRNHPQFLAGKGSLLDILDKQILATSFGVSNRTIKRLLRSPADSIIFGCSSCAEEEEKIVKEEDERKRREEEERKREEEEEEARKRERERKREEEEARREREREEEKEREEEEARRQQEDRERKRAEEEARRERERQREEEAEAAAAAAAAKREQEKRERRRQEEAEREQEQARKEAEEAAKREQEQARREAEAAAKKEQEQARREAAAAAKREQEQARKKAEGAAKREQERAKREQEKRRQEEEQREEEEEEEEEGGWTRREKGKTPEGVEWEQEEAMRPQIHRSSFHGRRVLKTRKL 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02660 647 Pfam Cupin 228 382 IPR006045 -
Pste1g02660 647 PANTHER OS03G0336100 PROTEIN-RELATED 13 400 - -
Pste1g02660 647 Gene3D Jelly Rolls 35 207 IPR014710 -
Pste1g02660 647 MobiDBLite consensus disorder prediction 605 632 - -
Pste1g02660 647 MobiDBLite consensus disorder prediction 408 594 - -
Pste1g02660 647 CDD cupin_7S_vicilin-like_N 51 199 - -
Pste1g02660 647 SMART Cupin_1_3 228 383 IPR006045 -
Pste1g02660 647 SUPERFAMILY RmlC-like cupins 222 396 IPR011051 -
Pste1g02660 647 SUPERFAMILY RmlC-like cupins 54 194 IPR011051 -
Pste1g02660 647 Coils Coil 400 604 - -
Pste1g02660 647 CDD cupin_7S_vicilin-like_C 235 392 - -
Pste1g02660 647 MobiDBLite consensus disorder prediction 408 647 - -
Pste1g02660 647 Gene3D Jelly Rolls 219 398 IPR014710 -
Pste1g02660 647 MobiDBLite consensus disorder prediction 633 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02660 Pste-Chr1 10411297 10413882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02660 9 404 Miscellaneous Gene Families AT2G18540 43.578 2.28e-103 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02660 1 10411297 10413882 Pste1g02660 1 10411297 10413882 ECH