Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02623 GAAACATGTGATATGCTGTGCATCAGCAAAAATATGTCCATATAATGATTATGGAGGCTGTTTGGGAGCGAAAGGAAAAATAGTTAAAAAGGTTACTACTCAGATTTGCAGAGCGTGAAGCTGAGCTACCAACTCTGTTTATCATCCCTTCCTCTCCGCACTTTCTTTTTCAATCAGGACTATGATCAAACTCTTTAAAGTAAAGGAAAAGCAGAGAGAACTTGCAGAAAATGCAAGTGGTGGACCACCCATCAAGAAACAAAGTGCCGGTGAATTGCGTCTTCACAAAGATGCAAATGCATCCATGAGCAGAACAGAAGCTATAACTGCAGTGCGGCGTAATTTGATTGCTCTGGCTATTGTTTCTGTGATTGTGACCATGAAAATCATCGTTTCAGCCAGAAATGGAATTTTGAATGGCAAATTGCTTCATACTACTGAATATCACACATCTGATTGTATGTCAAATATAAGTGAGCTGAATCTTCCAAAATCATGCAACATACAATTCCCTAATGGTAAAGATGATCTGATGAACTTTGAAGTTTCAATTCGACCTGATGATGGATATTACTTAGGTGGCACATTCTTGTTTTCCTTTCAAGTGTCTCCCATTTATCCACACGAAGCACCAAAGGTTAAGTGCAAGACAAAGGTCTATCATCCAAATATTGACTTGGAAGGAAATGTTTGTCTCAACATCTTACGAGAAGATTGGAAACCTGTCCTTAATATTAACACTGTCATCTATGGCTTGTATCATCTCTTCACGGAACCAAATTACGAGGATCCACTGAATCATGATGCTGCTGCTGTGTTGAGAGAGAACCCAAAGATGTTTGAATCTAATGTGAGGAGGGCAATGGCCGGTGGGTATGTGGGGCAAACCTTTTTCCCGCGCTGTATTTAGACCTTTGCTCGCTACCTTCAAGTCCTTGTCAAAATATGTTATCAACGATTGAAGGTTCTTGGTTTGTAAAATGGATTTTACTTTCATCAGTTGTTATTTTTCTTGGTCCAGCAACAGGCCGCGTTCCTTAGACCACCTTGCGCGTCTAAAAGCCAAACAAGTGGAATGCTTATTGTATAACCTGTGGTTTAATTGAATGTTGACAAATTATTCTAAAATGGACCAAACAAAATCTGAAAATGAGTTTAGCAGTCAACGTTAGTATTTTGTTTTCCTTGTTATTTTTGGGCGGCTCCAATGTCTTGTATGCATATCTACGGCTGCTTTTCCTTTCCCTGAGAAGCCAAGAAACATACAAAATAGCCGGGCCCTGTTATTGGAATTTGTTTCTACATACGTAAGCATGTAAAAGGTAGCTTATTTGAGTACTCTAG 1344 0.3929 MIKLFKVKEKQRELAENASGGPPIKKQSAGELRLHKDANASMSRTEAITAVRRNLIALAIVSVIVTMKIIVSARNGILNGKLLHTTEYHTSDCMSNISELNLPKSCNIQFPNGKDDLMNFEVSIRPDDGYYLGGTFLFSFQVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNYEDPLNHDAAAVLRENPKMFESNVRRAMAGGYVGQTFFPRCI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02623 242 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 85 233 IPR000608 -
Pste1g02623 242 FunFam NEDD8-conjugating enzyme Ubc12 84 242 - -
Pste1g02623 242 SMART ubc_7 91 233 - -
Pste1g02623 242 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 160 175 IPR023313 -
Pste1g02623 242 Gene3D Ubiquitin Conjugating Enzyme 86 242 IPR016135 -
Pste1g02623 242 Pfam Ubiquitin-conjugating enzyme 105 227 IPR000608 -
Pste1g02623 242 SUPERFAMILY UBC-like 98 240 IPR016135 -
Pste1g02623 242 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 116 220 - -
Pste1g02623 242 CDD UBCc 114 226 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02623 Pste-Chr1 10089860 10094694 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02623 1 10089860 10094694 Pste7g01424 7 13038000 13050234 PCT