Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02607 ATGGCGGAATCTCTCTCAAACGCCCAACTCTCTCCCTCTAAAACCCTAGACCGAAGCAACGGTCATGATTCCACGTCGGAATCGCATCCAACAGCTCAAGTCAATCCAGAAAATGACGACGTCGTTTCGTCGGGGAAACGGAAGAGAGAAGACGAGGAAGATCGTTCGCTCCATCCACTGTGGAAAACCAGCCTCTGTTCCTTCTTCCGGAGCCATAACGGATCGTGCAACCACGGCAGCACGTGCCGCTATGCGCACGGCGAGGAGGAGCTCCGCCCTCGCCCCGACAACACGTGGGACCCGACCTCCGAGCGCGCGAAGAAGGCGTTCAAGACGGAGGCCGACGAGAAGCTTGCCGTCTTGGAGGACGTCATGATGACGGAGGCCGTCATCGACGGCGGCGATGACGACTGTTGTGGCTCCAATCACGCCCTTAGTAAATGCTTGGCTATACCTTTTAAGCATGCTAAGAAAAAGAAAGGCATGGGGATTGGTTTTGTTACTTTTGAAGATGAAGAACAGTTGAAGAGTTCCGCAAAGAATTTAGAAGGAAAATCAATTGGCAACAAAACGATTAAGGTTGCTGATGTCATTCCTCGATCATTTGAAAAGAAAAGTAAAGCCAATGTTGTATCCCGGCAAGAATTAGATGAGGAGAATACCGGTGTTGATGATCCTTCCAGTGGGAATTTGGATGCTGAAACACATACTGATAACTTCGCAAAGACAAGAAGCGTGCGTGATGCAGTGACTCCTCTAGCTCACAAAGCTTATGCTGATCAGTTGGAGCAAAAGAAAACCTCTCTAATGCAGATTCTCAAAAAACTGACTAGAAATGCTCGTAAAGCTTGTCCGAATGGGGTTCCTCTTCCTGAGTGGATTCTCAAGTCTAGGGAAATAGGTGGTCTTCCATGCAAACTAGAGGGTATTATTGCTTCTCCAATTGTAAATGGATACCGTAACAAGTGTGAATTTTCTGTTGGATATTCTCTCGAAGGCAAAGTAACAGTAGGCTTCATGCTTGGAAACTTCAGGGAAGGTGTAACAGCAGTTGAGGAAGCAGTGGACTGCCCGAACGTTTCAACAATTGCTTGCAAATATGCTACAATCTTTCAGGATTTTTTGCAGGACAGTGATTTACCTGTTTGGAATAGATTTAAAAATACTGGATTTTGGCGTCAATTGACGGTCCGAGAAGGGAGAACAAAAGAGAATGTTTTTGATGCTGAAACTTTTGGTGGTATAGCAGAGGTCATGCTTATTGTGCAGGTTTCTACTGCTAGCTTTGATGATGCAAAAGTCGCAGCTGAATTCAAGAGGCTTGCTCAGGCATTTATTTCCGGAGCTACTTCGCATTGTCCAACATTACCCCTTACAGGTCTGGTAGTTCAGGATCACCAAGGAATATCCAATGTGGCGCCAGCTGACGCACCACTGCATCCGCTTCCCATTCCAAAAGTAGTTGGTGATACTGAGATGTGTGACAGTGAGAATAATAATGCCGTGGATGTAAGAATCCATGATTATATCAACAATCTCCAGTTCTCTATATCTCCAACAGCATTTTTTCAGGTTAACACTCTTGCTGCAGAGAAGTTGTACTCACTTGCTGGAGATTGGGCATGCTTAGGTCCTGATACACTGCTGTTTGATATATGCTGTGGGACAGGAACAATTGGCCTGACATTAGCACATCGAGTTGGTATGGTAATTGGCATTGAAATGAATGCCTCTGCTGTATCTGATGCTCATAGGAATGCTGAGATTAATGACATAAAAAATGTTAGATTTATATGTTCAAAGGCAGAGGATGTGATGGGATCTCTATTAAGGGAATACCTAGGTGTTAAGCAACAAGTTAATAATCCTAATATCTCTGGAAGTGACAACAACCATCCTGAGGACAGTGCCTGCTCACAGCCTGAAAATGGTGAAGTGGCAACTCATTGTCCAGAAAATAATGATGCAGCAGTTGGAAGTGAGGTTAAAAAAGGTAGCACTTTTGAACAAGTTGATGGGATCTCTGAACATGCAGAGGACAGAATGGGATCTTTGTTAAGAGTGGATGTAAATGTGCCTAAGGAACAAAGTGATGATCCTCCAAATATCTATGGAAGTGTTGATGACATTCCAGACTATAAAAGCTGCCCAGAGCCTGAAAATGGTGAAACAGTGTCTCATTCAAAAAATAACAATACAGAAGTTGGAGGTGAGGTTCTGAAGTGCAGCACTTCTGAAAATGGGAATACTTCCTTGCAACAGTTCAAAAATGTGGTTGCTATTGTTGATCCTCCACGGGCTGGACTTCATCCAACTGTGATAAAAGCTTTGAGAACTCATCCGCGCTTGCGGAGGCTTGTTTACATCTCCTGTAATCCTGAAACTTTGGTGGCAAATGCTATTGAGCTTTGTACGCCATCCCCCATAAAAATTGAGAAAGGAAATAAAGACAACAGAGGATGGAGAAACATGAGCAGTGCTGGTCTAGCACGGCACAGGGCCAAATCTATGCCCATCTCAGAGGCCTTCCATCCCGTAAAGGCTATGGCTGTTGATCTTTTTCCACATACCCCACACTGTGAATTGGTTATGCTTCTTGAAAGGTAGTTAATAGGTGTGGACCAGACACCAAAGTCATGGTTAAGTTTATTTTATATGCTAGCCTCCCAAATTTTACTTGTCCAACATTTTTTTGGCGGCACTGCGAGTGGCGGGGGATGTTAGTGTTTATTATATTCTGATCTGCGCACTGAATTTTATTTTAGTATTTTTTTTATAGGCAAATTTTGTTTTAGTATGACCTTCCATATTCAGCTGTAACATGATTGCCTTTTGCTGCATGTATCCTGATTCATGAAGCATTATCTGCGTCTTGTCTTTTTCCAATGGCCATTTTAATTTCATTATCGTACCAGGTGGTCAGAAATTATTCTGTGCTCTTCGAGCATCATGAATAAAATACTCCAAGATCAACATTTCTCTATCATTCGTTTTGGACACACTCAAAGTTGGGGTACGTGGGTATTATTAGAAGCAATTATTTCTTGTAAGAAATACGCAAAATCTTTTTTAGGGTGTGGTTTTTTAAGGAAACTCGTACCTTTTTCTTTTTGACTTTTTTAATAAAAGTGCCTTTTCC 3139 0.4298 MAESLSNAQLSPSKTLDRSNGHDSTSESHPTAQVNPENDDVVSSGKRKREDEEDRSLHPLWKTSLCSFFRSHNGSCNHGSTCRYAHGEEELRPRPDNTWDPTSERAKKAFKTEADEKLAVLEDVMMTEAVIDGGDDDCCGSNHALSKCLAIPFKHAKKKKGMGIGFVTFEDEEQLKSSAKNLEGKSIGNKTIKVADVIPRSFEKKSKANVVSRQELDEENTGVDDPSSGNLDAETHTDNFAKTRSVRDAVTPLAHKAYADQLEQKKTSLMQILKKLTRNARKACPNGVPLPEWILKSREIGGLPCKLEGIIASPIVNGYRNKCEFSVGYSLEGKVTVGFMLGNFREGVTAVEEAVDCPNVSTIACKYATIFQDFLQDSDLPVWNRFKNTGFWRQLTVREGRTKENVFDAETFGGIAEVMLIVQVSTASFDDAKVAAEFKRLAQAFISGATSHCPTLPLTGLVVQDHQGISNVAPADAPLHPLPIPKVVGDTEMCDSENNNAVDVRIHDYINNLQFSISPTAFFQVNTLAAEKLYSLAGDWACLGPDTLLFDICCGTGTIGLTLAHRVGMVIGIEMNASAVSDAHRNAEINDIKNVRFICSKAEDVMGSLLREYLGVKQQVNNPNISGSDNNHPEDSACSQPENGEVATHCPENNDAAVGSEVKKGSTFEQVDGISEHAEDRMGSLLRVDVNVPKEQSDDPPNIYGSVDDIPDYKSCPEPENGETVSHSKNNNTEVGGEVLKCSTSENGNTSLQQFKNVVAIVDPPRAGLHPTVIKALRTHPRLRRLVYISCNPETLVANAIELCTPSPIKIEKGNKDNRGWRNMSSAGLARHRAKSMPISEAFHPVKAMAVDLFPHTPHCELVMLLER 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02607 868 MobiDBLite consensus disorder prediction 621 645 - -
Pste1g02607 868 CDD RRM_SF 153 194 - -
Pste1g02607 868 Gene3D Vaccinia Virus protein VP39 489 867 IPR029063 -
Pste1g02607 868 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 249 868 IPR010280 GO:0006396|GO:0008173
Pste1g02607 868 Gene3D - 54 94 - -
Pste1g02607 868 CDD AdoMet_MTases 551 605 - -
Pste1g02607 868 SUPERFAMILY RNA-binding domain, RBD 157 201 IPR035979 GO:0003676
Pste1g02607 868 Gene3D - 148 221 IPR012677 -
Pste1g02607 868 MobiDBLite consensus disorder prediction 210 235 - -
Pste1g02607 868 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 251 868 IPR029063 -
Pste1g02607 868 Gene3D Vaccinia Virus protein VP39 253 319 IPR029063 -
Pste1g02607 868 Gene3D - 320 406 - -
Pste1g02607 868 Pfam tRNA (Uracil-5-)-methyltransferase 751 804 IPR010280 GO:0006396|GO:0008173
Pste1g02607 868 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 157 193 IPR000504 GO:0003723
Pste1g02607 868 ProSiteProfiles Zinc finger C3H1-type profile. 60 89 IPR000571 GO:0046872
Pste1g02607 868 ProSitePatterns RNA methyltransferase trmA family signature 1. 763 795 IPR030390 -
Pste1g02607 868 Coils Coil 259 279 - -
Pste1g02607 868 PANTHER TRNA (URACIL-5-)-METHYLTRANSFERASE 78 868 IPR045850 -
Pste1g02607 868 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 61 88 IPR000571 GO:0046872
Pste1g02607 868 MobiDBLite consensus disorder prediction 1 56 - -
Pste1g02607 868 MobiDBLite consensus disorder prediction 41 56 - -
Pste1g02607 868 SUPERFAMILY CCCH zinc finger 58 93 IPR036855 GO:0046872
Pste1g02607 868 Pfam Methyltransferase domain 549 607 IPR025714 -
Pste1g02607 868 SMART c3hfinal6 60 88 IPR000571 GO:0046872
Pste1g02607 868 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02607 Pste-Chr1 9976849 9982509 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02607 1 9976849 9982509 Pste1g02607 1 9976849 9982509 ECH