Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02601 ATGAGACCTACACAGATTCTGTTCCTTTTGCTTTGCTTCTTCTGTGTTTATGCTCCTTCTTCCTTTTGTGCAAATGTCACCTATGACCATAGAGCATTGCTCATTGATGGCAAGCGCCGACTCTTGGTCTCTGGTTCTATTCATTACCCTCGTAGCACTCCAGAGATGTGGCCAGACCTTATTCAGAAGTCCAAAGATGGAGGACTTGATGTGATTGAGACTTACGTTTTCTGGAACTTACATGAACCAGCTCAAGGCCAGTATAACTTTGAAGGTAGGGCAGATTTAGTTAAATTTGTGAAGGCAGTAGCAGCAGCAGGTCTATATGTGCATCTCCGGATTGGTCCATATGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGTTACATTTTATTCCCGGAATTCAGTTCCGAACTGATAACAAACCATTTGAGGCAGAAATGAAGCGCTTTACTGCTAAAATTGTGGATATGATGAAGCAAGAGAACCTCTATGCCTCACAGGGAGGACCTATTATTTTGTCACAGGTTGAAAATGAGTATGGTAACATTGACGCGGCTTATGGTCCTGCTGCTAAATCCTACATCAATTGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGATGCTCCTGATCCAATTATTAACACGTGCAATGGATTTTACTGCGATCAATTTACACCAAATTCTAATACAAAACCCAAAATATGGACTGAGAATTGGAGTGGATGGTTTCTTTCATTTGGTGGTGCTGTGCCTTACAGACCAGTGGAAGATCTGGCGTTTGCTGTAGTGCGCTTTTACCAGCGAGGTGGAACTTTTCAAAATTACTATATGTACCATGGAGGGACTAATTTTGGCCGAACTACTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCACCAATTGATGAATATGGAATTATTAGACAGCCTAAGTGGGGGCACCTTAAAGATGTGCATAAGGCCATAAAGCTTTGTGAAGAGGCTCTGCTAGCAACTAATCCAACAATTACATTTCCTGGACCAAATATAGAGTACATATTTTATATGCTTTATAGAGCCTTCCTTGCCAATATAGCCACCGCCGATGCAACAGTGACCTTTAATGGAAATTCGTATCACTTACCTGCATGGTCTGTGAGCATCTTACCGGATTGCAAGAACGTAGTGCTTAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTCACAACTGAATCCTTAAAAGAAGAGGTTAGTTCTTTGGAAGGTTCTGGCTCAGGATGGAATTGGATTAGTGAACCAATTGGTATTTCAAAGGATGACTCATTCTCAAAATTTGGATTACTGGAGCAAATAAATACAACTTCTGATAGAAGTGATTACTTGTGGTACTCGTTAAGCATTGATCTTGAAAATGGTGCTGGTTCTCAAACCATCCTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGAAAGCTTGCAGGGAGTGGAACCGGCAACAGTGGCAAAGCTAAGATCAATGTAGACATCCCAGTCACACTAGTGGCAGGGAAAAACACAATTGATCTCCTGAGTTTAACTGTGGGACTTCAGAACTATGGAGCTTTTTTTGACACGTGGGGTGCAGGTATCACTGGTCCTGTGATATTGAAAGGTTTGAAAAATGGAAGCACTGTTGATCTCTCCTCCAAGCAGTGGACATATCAGGTTGGCCTTAAAAATGAAGATTTAGGTCCATCTAGTGGCAGTTCTCGTCAGTGGAATTCACAATCTACCTTACCAACAAATCAACCATTGACTTGGTACAAGACAAATTTCGATGCTCCCTCTGGCAGTAATCCAGTTGCAATTGACTTCACCGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAGAGCATTGGGCGATACTGGCCTGCATATGTTTCTCCAAATGGCGGTTGTACTGACTCATGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAACTGCGGAAAACCGTCACAGAAATTATACCACGTACCACGATCATGGTTACAGGCCGATATCAACACACTTGTATTGTTTGAGGAAAGTGGAGGCGACCCTACGCAAATTTCTTTCACTACAAAACAGATAGGAAGTGTATGTTCGCATGTATCCGAATCTCATCCTCCACCTGTAGACTTGTGGAATTCAGATAAAGAAAGAAATGTAGGGCCAGTCTTGTCATTGGAGTGCCCTTATCCTAATCAGGTGATCTCTTCCATTAAATTTGCAAGTTTTGGAACACCTTACGGGACTTGTGGGAACTTCAGACATGGACGGTGCAGAAGTGATGAAGCTCTATCCCTTGTGCAGAAGGCCTGCATTGGATCAAGCAGTTGTAGAATTGGAATATCAATTAATAAATTTGGAGATCCATGTAAAGGAGTAGTAAAGAGCTTAGCTGTTGAAGCTTCTTGTGCATAGACATGTTGCTTCAAGGCTTCCCACTTCCAAGATTGAAATCGGCTGAAGAGCACTCTGCACTCCATGTGTCTTAGACTCATTATTGAAGATGATCTCTGGCTAGCCAATGTAAAATTCTATGTAGTAAACCAGGAAAAAATGTGAAACGAAGCAGTGTAGATACACTTAAAAAAAGGGAAGGTTTCACTAGTACATAATGTGTGATAGTAATATGTTTTACTTTTAAGGAAGGTTTCTGATTCACTACAAGAAATTGCTCCC 2766 0.4172 MRPTQILFLLLCFFCVYAPSSFCANVTYDHRALLIDGKRRLLVSGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPAQGQYNFEGRADLVKFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNKPFEAEMKRFTAKIVDMMKQENLYASQGGPIILSQVENEYGNIDAAYGPAAKSYINWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNTKPKIWTENWSGWFLSFGGAVPYRPVEDLAFAVVRFYQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDVHKAIKLCEEALLATNPTITFPGPNIEYIFYMLYRAFLANIATADATVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASMISSFTTESLKEEVSSLEGSGSGWNWISEPIGISKDDSFSKFGLLEQINTTSDRSDYLWYSLSIDLENGAGSQTILHIESLGHALHAFINGKLAGSGTGNSGKAKINVDIPVTLVAGKNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSTVDLSSKQWTYQVGLKNEDLGPSSGSSRQWNSQSTLPTNQPLTWYKTNFDAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPAYVSPNGGCTDSCNYRGAYSSSKCLKNCGKPSQKLYHVPRSWLQADINTLVLFEESGGDPTQISFTTKQIGSVCSHVSESHPPPVDLWNSDKERNVGPVLSLECPYPNQVISSIKFASFGTPYGTCGNFRHGRCRSDEALSLVQKACIGSSSCRIGISINKFGDPCKGVVKSLAVEASCA 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02601 834 FunFam Beta-galactosidase 21 341 - -
Pste1g02601 834 Gene3D - 419 564 - -
Pste1g02601 834 ProSiteProfiles SUEL-type lectin domain profile. 748 834 IPR000922 GO:0030246
Pste1g02601 834 Gene3D Glycosidases 21 341 - -
Pste1g02601 834 FunFam Beta-galactosidase 588 728 - -
Pste1g02601 834 SUPERFAMILY Galactose-binding domain-like 395 568 IPR008979 -
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 612 626 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 639 655 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 FunFam Beta-galactosidase 413 567 - -
Pste1g02601 834 Gene3D - 565 728 - -
Pste1g02601 834 SUPERFAMILY Galactose-binding domain-like 580 746 IPR008979 -
Pste1g02601 834 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Pste1g02601 834 CDD Gal_Rha_Lectin_BGal 747 833 - -
Pste1g02601 834 PANTHER BETA-GALACTOSIDASE RELATED 18 751 IPR001944 GO:0004553|GO:0005975
Pste1g02601 834 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Pste1g02601 834 Pfam Beta-sandwich domain in beta galactosidase 369 411 IPR041392 -
Pste1g02601 834 Pfam Galactose binding lectin domain 756 833 IPR000922 GO:0030246
Pste1g02601 834 Gene3D - 744 834 IPR043159 -
Pste1g02601 834 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Pste1g02601 834 FunFam Beta-galactosidase 290 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02601 Pste-Chr1 9919246 9926440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02601 23 689 Glycoside Hydrolase AT2G28470 74.298 0.0 1056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02601 1 9919246 9926440 Pste1g02601 1 9919246 9926440 ECH