Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02567 CTATCCTTATCTGAAACTGCCTTGATAATATAATTTATTCATCATCATGTTATTTTGTTTACTTAGCACCAAAAAAGAAATATATAAATTAAGGCATACCCATATCAATATCAATATCATTATCATTATATTGGAGAGTGGCAACAACAGCTAAGCTAAGCTAAGCTAAGTAGTTGTGATTTGTGAAGAGAGAAAGCAATAAGCGATCCATTTTTGTTTCTGCCACACACAATGCATAGGATCAACACTGCAAGGTCCTTTTTTTCTGCGCTTTTCAGAACCAAATCTCACCCTCGCTCTGCGCCCTTCTCCACCTCCTTGCTCTTCGACGAAACTCAGATACAGTTTAAAGAAAGTGTTGCTCAGTTTGCAACTGAAAATATTGCACCTCATGCTTCAAACATAGACCACACAAATTATTTCCCGAAGGATGTGAACTTATGGAAAAGCATGGGAGATTTTAATCTCCTTGGGATTACTGCACCAGAGGAATATGGAGGGCTTGGCCTTGGCTACTTGTATCACTGTATAGCAATGGAAGAGATCAGCCGTGCTTCAGCATCTGTTGGTCTTTCTTATGGTGCTCATTCAAACTTGTGTATCAATCAGCTGGTGAGGAATGGGAGCCCTGCTCAGAAACAGAAATATTTACCGAAGCTTATTTCTGGGGATCATGTGGGAGCTTTGGCAATGAGTGAGCCCAATTCTGGTTCTGATGTTGTTAGCATGAAATGCAAGGCTGATCATGTAGAGGGGGGCTATGTACTTAATGGGAACAAGATGTGGTGTACTAATGGGCCAGTTGCTCAAACATTAGTTGTCTATGCTAAAACAGACATAACTGCTGGGTCAAAAGGCATTACTGCATTCATCATTGAGAAGGGAATGCCTGGATTCAGTACTGCCCAGAAATTGGATAAACTTGGGATGCGAGGAAGTGATACATGCGAACTTGTCTTTGAGAATTGCTTTGTTCCAGAAGAAAATGTTCTTGGGAAAGAAGGGAAAGGAGTCTATGTCATGATGTCTGGGCTGGATCTAGAGAGACTTGTTTTGGCAGCTGGTCCTCTAGGTATTATGCAGGCAAGTGTTGATGTTGTTCTACCTTATGTTCGACAAAGAGAGCAGTTTGGTCCCATCACATTGTCAATTGATCGTTGGTTACAGGGGAAAGTTGCTGACATGTATACTTCATTACAGTCTTCAAGGTCTTATGTGTACTCCGTAGCTCGTGACTGTGACAATGGAAAAGTTGACCCAAAGGATTGTGCTGGAGCCATACTTTGTGCAGCTGAAAGAGCAACCCAGGTTGCTTTGCAGGCTATACAGTGTTTAGGTGGAAATGGCTATGTTAATGAGTATCCTACTGGTCGTTTCCTGAGGGATGCCAAACTCTACGAGATTGGGGCAGGAACTAGTGAGATCAGACGAATGATTATTGGCCGCGAGCTCTTCAAGGAGCAATAA 1467 0.4206 MHRINTARSFFSALFRTKSHPRSAPFSTSLLFDETQIQFKESVAQFATENIAPHASNIDHTNYFPKDVNLWKSMGDFNLLGITAPEEYGGLGLGYLYHCIAMEEISRASASVGLSYGAHSNLCINQLVRNGSPAQKQKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADHVEGGYVLNGNKMWCTNGPVAQTLVVYAKTDITAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQASVDVVLPYVRQREQFGPITLSIDRWLQGKVADMYTSLQSSRSYVYSVARDCDNGKVDPKDCAGAILCAAERATQVALQAIQCLGGNGYVNEYPTGRFLRDAKLYEIGAGTSEIRRMIIGRELFKEQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02567 411 Pfam Acyl-CoA dehydrogenase, N-terminal domain 34 147 IPR013786 GO:0016627|GO:0050660
Pste1g02567 411 FunFam isovaleryl-CoA dehydrogenase, mitochondrial 264 409 - -
Pste1g02567 411 Pfam Acyl-CoA dehydrogenase, middle domain 151 246 IPR006091 GO:0016627
Pste1g02567 411 Gene3D - 263 407 - -
Pste1g02567 411 PANTHER ACYL-COA DEHYDROGENASE 31 410 - -
Pste1g02567 411 Pfam Acyl-CoA dehydrogenase, C-terminal domain 258 407 IPR009075 GO:0016627
Pste1g02567 411 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 25 269 IPR009100 GO:0016627
Pste1g02567 411 CDD IVD 32 409 IPR034183 GO:0003995
Pste1g02567 411 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 26 148 - -
Pste1g02567 411 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 153 165 IPR006089 GO:0003995
Pste1g02567 411 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 366 385 IPR006089 GO:0003995
Pste1g02567 411 FunFam Isovaleryl-CoA dehydrogenase, mitochondrial 150 263 - -
Pste1g02567 411 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 256 409 IPR036250 GO:0016627
Pste1g02567 411 Gene3D - 150 262 IPR046373 GO:0016627
Pste1g02567 411 Gene3D - 25 148 IPR037069 GO:0016627|GO:0050660
Pste1g02567 411 PIRSF PIGM 158 411 - -
Pste1g02567 411 PIRSF PIGM 28 136 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02567 1 411 Acyl Lipid Metabolism Gene Families AT3G45300 81.022 0.0 658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02567 1 9648438 9656054 Pste1g02567 1 9648438 9656054 ECH