Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02477 ACTGCTTCCACCTTATTCCTTAACGAGAAACGGGCAAGGAAGCGAAACTGAGAGAAGAAAGAAGAGAAGTTTAATATTCATATTTTGGTATTTCCACTTGTGTCCCCGGCTGAGGTATTCCTTCAGGCTGAGACTGAGTCTGAGTCATAGAGTGAGTCACCCGCTTCAACCCCATTTGGAGAAAAAGGTTTATTAACTCCATCCCTTATGGTGTCCGAATCCGAACTCATCGGCCGTCTCCGTGAGTTCCTCCGGAGCTCCGACCTCAACACCACCACCACCGCCACCGTCCGCCGCCAGTTGGAAGCCGATTTCGGAATCGATTTATCCGACCGTAAGGCATTCATCAGGGAACAGGTGGACCTGTTCCTCCAAACCGAGCACAACCAAAACGACCAAGTAGAGGAACAACATCAAAACGACGACGTAGAGGATGCGCCTGATAATCCCGACCAAAGCCACCCCTCCGATTCCAACGAAGAAGACGACGAAGAGGAAGAGGATAAACCCAAGCACTCCAAAAATGCCAAGAAGAATAAAGCTCGATCTAGCAAGTTAGGTGATGAGGTAGTAAAGAAAAGAGGCAGTGGTTTTTGCAAATTATGTAGCTTGTCTCCGCAACTTCAGGAATTCATGGGAGCTCCAGAAATGGCCAGGACTGAGGTTGTTAAGAACTTATGGGCCTATATTAGGGAGAAAAATTTGCAAGATGCGAACAATAGACGAAATATAATTTGTGATGAACGATTGCGTACCCTTTTCAATGTCAATTCCATCAACATGTTCCAAATGAATAAAGCATTGTCCAAGCACATCTGGCCATTGGATTCAGATGATGTTGTCCAGGTGAAGTCCACACCAAAGGAAAAGCAGAAGAAGCAAGAGAGAGATGATGATTCAGATGAGCCAAAAAGAAAGGAAAAACGACAGAAAGGAGGAGGGAAATCAGGTTTTCTTGCTCCTCTTCAGCTATCTGATGCTCTTGTAAACTTCCTTGGTACCGGAGAAAGCGAGTTATCAAGAACTGATGTCATAAAAAGAATGTGGGATTACATTAAAGGAAACAACCTGCAGGATCCTTCTGACAAGAGGAAAATAATATGTGACGAGAAGCTGAAAGAACTCTTTGATGTCGACTCCTTCAATGGTTTCACCGTTACAAAACTGCTGGCTCCTCATTTTATAAAGACAGAGCAGTGAGTTATTTGTACATTGTTACTCGGTCGAGCATGGGAAGGTTGGGGAATTTTGTGTATTAAGTTAGCTTTTTAAGGTTTTCTGTGTCCTGTTGGGATACCATGCTAACAGGAGGAATACAAAATAGTGAAATGACAGATTTTCAGTAAATTTTTCTTGAAGATTTTAATGTTCTGATTAGTCAAGAAAAAAAAGATTTTAATGTTATGTGACCTTTATCTTGTTTTATATATTATCCTGTTTTGTCACTTGGTAGTTGAAATGTATATTTGGTTCCTGAAGCTGCAAGG 1487 0.423 MVSESELIGRLREFLRSSDLNTTTTATVRRQLEADFGIDLSDRKAFIREQVDLFLQTEHNQNDQVEEQHQNDDVEDAPDNPDQSHPSDSNEEDDEEEEDKPKHSKNAKKNKARSSKLGDEVVKKRGSGFCKLCSLSPQLQEFMGAPEMARTEVVKNLWAYIREKNLQDANNRRNIICDERLRTLFNVNSINMFQMNKALSKHIWPLDSDDVVQVKSTPKEKQKKQERDDDSDEPKRKEKRQKGGGKSGFLAPLQLSDALVNFLGTGESELSRTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFNGFTVTKLLAPHFIKTEQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02477 330 CDD SWIB-MDM2_like 253 325 - -
Pste1g02477 330 Gene3D SWIB/MDM2 domain 123 211 IPR036885 -
Pste1g02477 330 CDD SWIB-MDM2_like 133 203 - -
Pste1g02477 330 Gene3D SWIB/MDM2 domain 243 330 IPR036885 -
Pste1g02477 330 Pfam DEK C terminal domain 2 55 IPR014876 -
Pste1g02477 330 MobiDBLite consensus disorder prediction 214 250 - -
Pste1g02477 330 FunFam Upstream activation factor subunit 123 211 - -
Pste1g02477 330 ProSiteProfiles SWIB/MDM2 domain profile. 128 205 IPR003121 -
Pste1g02477 330 ProSiteProfiles SWIB/MDM2 domain profile. 248 327 IPR003121 -
Pste1g02477 330 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 1 56 IPR014876 -
Pste1g02477 330 Gene3D - 1 59 - -
Pste1g02477 330 SUPERFAMILY SWIB/MDM2 domain 125 207 IPR036885 -
Pste1g02477 330 MobiDBLite consensus disorder prediction 214 244 - -
Pste1g02477 330 FunFam Upstream activation factor subunit 239 330 - -
Pste1g02477 330 SUPERFAMILY SWIB/MDM2 domain 246 329 IPR036885 -
Pste1g02477 330 Pfam SWIB/MDM2 domain 132 203 IPR003121 -
Pste1g02477 330 Pfam SWIB/MDM2 domain 252 325 IPR003121 -
Pste1g02477 330 SMART swib_2 249 330 IPR019835 -
Pste1g02477 330 SMART swib_2 129 208 IPR019835 -
Pste1g02477 330 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 6 208 - -
Pste1g02477 330 MobiDBLite consensus disorder prediction 59 119 - -
Pste1g02477 330 SUPERFAMILY DEK C-terminal domain 3 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02477 Pste-Chr1 9080024 9084952 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Pste1g02477 SWIB 2.8e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02477 1 9080024 9084952 Pste1g02477 1 9080024 9084952 ECH