Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02447 CAACGAAAACAAAAATACCGTGGTACAATCTACGATTCACCATTAACGAATCATCACCTCGTCTGCACAGCGCGCAGAGCACTGACTCTGGTCAACAGGAACAGGAAGCACGAGAAGGTTGTGTTCAGTGTTCTGCTTCACTCACCATTCTATACAACAAGCCACCTAAATAGGGCAAGAACTGAAGGGATAACCTTCACCAAGGAACCGTTCATGGAGGATGCTGGGCCTCGCAAGATAAAGAACATGAAGTTCTCCATGTTATCAGAATCGGAAATAAGCAAATTGGGTGAAGTTCAAGTGTGGAAAGGTGCCTACTATGATTCCTTTAAGAAGCCTATCCATGGTGGCTTGTTGGATCCTCGCATGGGCCCTGCTAATAAGAGTCTAGTCTGTGCAACATGCCATGGGAACTTTCATGACTGTCCAGGGCACTATGGATATTTAAACCTTGCCCTTCCTGTTTTTAATGTTGGATACTTAAGTACCATTGTCGAAATACTGAAGTGCATTTGTAAGGGGTGTGCTCGTATTCTCCTTGATGAAGATACGCGCACAAAACATTTGAAGAAAATGAGAAGTTCCAAAAAGAGTGAGCTGGATAAGATTGATTTTGTGAAAGTTCGTATAATTAAAGATTGTAGCAAAGTTGTGAATTGCCCGAGATGTGGATATATCAATGGTTCAGTAAAGAAGCTTCCGGCATCATTGACAATCATTCATGATTGCTCGAAATGTAAAAATAATATTGTTGAAGAGATTGAGTCTGCACTTTCTCGTATAAAAGACTCTAGGGCGACGACCAATGTGTCTAATCGAATTCTTAACCCGTTCCAAGTTCTTTCCCTGTTTAAGAGAATGCTTGATGAGGACTGTGAATTACTTTATGTTTCTGAAAGACCAGAGAAACTCATAATAACAAACATTGTTGTGCCACCTATAGCTATTCGACCTTCAGTTGTAATGGATGCATCACTGAGCAATGAAAATGACATAACAGAGAGGCTAAAGAACATAATCCAAGCAAATGCTGTTTTGCGCCAGGAATTACAAGAATCAAGTGTTTCATCCAAATTTCTGTTGTCAAAAGCATGCAATCGTGGGGTGGCGGAGTGGAGTAGCCCTTTGCCGCTCCTAAGATGCTTCTCGCAGAGCGTCTGGCTCTCGCGGCCATCATCGCGGAAATCATGCAAAATTGCAACAATTTGTGTTCTTCGCAGCCGCTACTCCATGTGTGCCGTTGATGGTTGGGATATCCTTCAAAATGAAGTTGGTCAATTTATAAATAGTGATGTTCGGGCTGTACCATTCTATATGCAACCGACCAAGCAATTAGCTGGCTTTGTTCAGCGTTTGAAAGGGAAGCATGGACGATTCCGTGGCAACTTATCTGGTAAACGTGTTGAATATACTGGCCGAACAGTTATTTCACCAGATCCTAATCTGAAGATTTCTGAGGTTGCAATACCCATCCATATGGCTGGTATTTTGACTTATCCTGAGCGAGTTACTCACCACAACATGGAGAAGTTGAGACAATGTGTGAGAAATGGTCCTGATAAGTATCCTGGTGCTAGAATGCTTAGACGTGATGGAGGTCACTCATGGTCCTTAAAAGTTCTCTGTAGGAAGCGTGCTGCAGATGAATTGAGGATTGGTGATATTGTTGATCGCCATTTGGAAGATGGAGACATTGTTCTTTTCAATAGACAGCCAAGCTTGCATCGGATGTCTATTATGTGTCACAGGGCAAGGATTATGCCTTGGAGAACCTTAAGATTCAATGAATCTGTATGCAACCCGTATAATGCTGACTTTGATGGTGATGAGATGAACCTGCATGTCCCACAGACTGAGGAGGCTCGTACAGAGGCTATTTTATTGATGGGGGTTCAAAACAATTTGTGCACACCAAAAAATGGCGAGATTCTTGTTGCTTCTACTCAAGACTTTTTAACCTCTTCCTTTCTCATAACCAGGAAAGACACTTTTTATGATCGATCTACCTTTTCACTTATTTGCTCGTATATGGGGGATGGCATGGATTTTATTGATCTGCCAACTCCTGCAATTGTTAAGCCAGTTGAACTTTGGAGTGGTAAGCAGTTATTTAACATTATACTGCGTCCACATGCAAATATGAGAGTCTATGTGAATCTTACCGTTAAGGAGAAAACATACACAAAGCTTGATGAGAAGAAAAGAGAATTGAAAACATTGTGCCCAAATGATGGGTTTGTTTATTTTCGTAATAGCGAGTTGATCTCTGGACAAGTTGGAAAGGTTACTTTAGGAAATGGCAATAAGGATGGACTGTTTTCTGTGCTACTGAGAGATTATAAAGCACATGCCGCTGCATCTTGCATGAATCGTTTAGCTAAATTGAGTGCACGATGGATTGGTAATCACGGGTTCTCTATAGGCATTGATGATGTTCAACCTAAAGAGATACTGATTAACAAGAAAGACGAAACAATTTCAGCAGGTTATAAACAATGTGATAATCATATAGAAGATTTCAATAAAGGGAAACTGGAACTCATAGCTGGTTGTGATTCTGCTCAAACATTAGAGGCTAAGATTACTGGGGTATTAAATGGACTACGTGATACGGCAGGGAAGGTTTGCATGCAAACCCTACACTGGAGAAATAGTCCATTGATCATGTCGCAGTGTGGCTCGAAAGGATCTCCTATTAATATCAGTCAAATGGTTGCCTGTGTTGGTCAACAGTCCGTTGGTGGTCGTCGTGCTCCTAATGGTTTCATAGATCGGAGCCTTCCTCATTTTCCTAGAAAAGCAAAAACCCCTGCTGCAAAAGGTTTTGTTGCTAATTCCTTTTACAGTGGATTGTCAGCTACTGAGTTTTTCTTCCATACAATGGGAGGGCGAGAAGGGCTTGTTGATACAGCGGTTAAAACTGCAGACACTGGATATATGTCTCGTCAGTTAATGAAATCCCTAGAGGATTTGTTTTTACATTATGATTACACTGTAAGAAATGCTGGTGGTTCTATTGTTCAATTTTGTTATGGAGATGATGGCATGGATCCAGCAGGCATGGAAGGAAAAAATGGAAAACCATTAAATTTTGAGCGGTTGTTTCTTAAAAGCAAGGCCATTTGTCCCAATGATGAAGATGATGAAATTTTATCTTCCTCAGATGTGTGTAAAGTAGTTCATGAGAAGCTCTCTGAATTTGATATATCTAGGTTAGTAGAGAAAGGAGTTTTAGAGGTGGGCTTCTCTACTGACTTTGTTGACTCTCTACAAAATTTTATCAAAGATAGCACACATTTAACAGAAAAAACTTACACTGATGACAATACTCAAAACCTGAAAAAGTTTGGGCAGAGGATATCTGGGATCACTCGTAGACAGCTAGAGGTGTTTTTGAATATTTGTCTATCTCGTTACCATTCCAAAAAAATCGAGGCTGGGGCTCCTGTTGGTGCAACTGGAGCTCATAGTATTGGAGAGCCTGGGACCCAGATGACTTTGAAAACTTTTCACTTTGCTGGAGTTGCAAGCATGAATGTTACTCTCGGAGTTCCTCGTGTCAAAGAAATAATGAATGGAAACAAGAAAATCAGTACACCAATTATCACTGCAATACTTGAGAGAGATGACAATGCAAATATTGCAAGAATGGTAAAAGATCGAATAGAAAAAACAAATTTAGGCCAGGTTGCGAAGAGTATAAAAGTTGTCATGACTTCAAGATCGGCATCAGTTGTTATCAGCCTTGACATGGAAAGAATCCAGAATGCACATTTAAATATAGATGCTAATATTGTAAAAGAATCAATTTTACAAACTAAAAAGACGAAATTGAAGCCAGAGAATATCAAGATTTTAGATATTAAAAAGCTTGAAGTTTCCCCCCAAGATGCTGATAGAAGTAAAATCCATTTTCAGCTTCACTATCTTAAAAATTTGCTTCCAACAGTTGTAGTAAAGGGAATTAAAACTGTGGATCGAGTTGTTATCAGTAAAGAAGAAGATAAAGATACCAAGGCTGAAAAGTTCAAATTACTGGTGGAAGGTATGGGCTTTCGGGAGGTTATGGGAGTTGAAGGGATTGATGGACGTAGCACTGTTAGTAATCATATTCTTGAAGTGAGAGACACACTTGGAATTGAAGCTGCCAGAATGAGCATTGTTAAGGAGATAAAGTATACCATGGTTGATACACATGGAATGAATATAGACATCCGCCATATGATGCTTCTAGCAGATGTGATGACTGCTACAGGTCATATCCTCGGAATTAACAGATTTGGAATTTCAAAGATGGGTAAAAGTGTACTAATGCTTGCATCATTTGAGAGGACAGCAGATATTCTTTTCCAGGCTTCCGTGCGTGGGAGAGACGACTCAATTGGTGGAGTAAGTGAATCCATAATCATGGGTATACCAATTCAGATAGGTTCGGGAATGATCAAGGTTGAATTCTCCGGAGTTGCCTCATGGAACAAGTCCAATTCTATCTTGAATTTGAAATTACATATTCGCAGCAAGAATGTGGATCATCACGGTCGGAGTGCGTCAAATAGACACCTTTTGCTGCCTGTCACAGAGGTTTATTCAGTGTCATCTTTGATCCATCAAGCTTTCTCATGGTTCACTCCATCATCTCTTATTTATGGAGAAGAGTGA 4659 0.402 QRKQKYRGTIYDSPLTNHHLVCTARRALTLVNRNRKHEKVVFSVLLHSPFYTTSHLNRARTEGITFTKEPFMEDAGPRKIKNMKFSMLSESEISKLGEVQVWKGAYYDSFKKPIHGGLLDPRMGPANKSLVCATCHGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTRTKHLKKMRSSKKSELDKIDFVKVRIIKDCSKVVNCPRCGYINGSVKKLPASLTIIHDCSKCKNNIVEEIESALSRIKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVSERPEKLIITNIVVPPIAIRPSVVMDASLSNENDITERLKNIIQANAVLRQELQESSVSSKFLLSKACNRGVAEWSSPLPLLRCFSQSVWLSRPSSRKSCKIATICVLRSRYSMCAVDGWDILQNEVGQFINSDVRAVPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMAGILTYPERVTHHNMEKLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDFIDLPTPAIVKPVELWSGKQLFNIILRPHANMRVYVNLTVKEKTYTKLDEKKRELKTLCPNDGFVYFRNSELISGQVGKVTLGNGNKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISAGYKQCDNHIEDFNKGKLELIAGCDSAQTLEAKITGVLNGLRDTAGKVCMQTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVCKVVHEKLSEFDISRLVEKGVLEVGFSTDFVDSLQNFIKDSTHLTEKTYTDDNTQNLKKFGQRISGITRRQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANIARMVKDRIEKTNLGQVAKSIKVVMTSRSASVVISLDMERIQNAHLNIDANIVKESILQTKKTKLKPENIKILDIKKLEVSPQDADRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKEEDKDTKAEKFKLLVEGMGFREVMGVEGIDGRSTVSNHILEVRDTLGIEAARMSIVKEIKYTMVDTHGMNIDIRHMMLLADVMTATGHILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPIQIGSGMIKVEFSGVASWNKSNSILNLKLHIRSKNVDHHGRSASNRHLLLPVTEVYSVSSLIHQAFSWFTPSSLIYGEE 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02447 1552 PANTHER DNA-DIRECTED RNA POLYMERASE 84 1483 IPR045867 GO:0003899|GO:0006351
Pste1g02447 1552 FunFam DNA-directed RNA polymerase subunit 639 811 - -
Pste1g02447 1552 Gene3D - 930 988 - -
Pste1g02447 1552 FunFam DNA-directed RNA polymerase subunit 811 929 - -
Pste1g02447 1552 FunFam DNA-directed RNA polymerase II subunit RPB1 543 638 - -
Pste1g02447 1552 Gene3D RNA polymerase ii 498 558 - -
Pste1g02447 1552 FunFam DNA-directed RNA polymerase subunit 71 193 - -
Pste1g02447 1552 Gene3D - 989 1040 - -
Pste1g02447 1552 Gene3D RNA polymerase II, clamp domain 70 194 IPR044893 -
Pste1g02447 1552 Gene3D RNA polymerase Rpb1, domain 3 639 811 IPR042102 -
Pste1g02447 1552 Pfam RNA polymerase Rpb1, domain 1 78 353 IPR007080 GO:0003677|GO:0003899|GO:0006351
Pste1g02447 1552 Gene3D - 457 638 - -
Pste1g02447 1552 Gene3D - 1436 1481 - -
Pste1g02447 1552 Pfam RNA polymerase Rpb1, domain 4 837 943 IPR007083 GO:0003677|GO:0003899|GO:0006351
Pste1g02447 1552 Pfam RNA polymerase Rpb1, domain 5 950 1435 IPR007081 GO:0003677|GO:0003899|GO:0006351
Pste1g02447 1552 CDD RNAP_III_Rpc1_C 1138 1481 IPR035698 -
Pste1g02447 1552 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 72 1483 - -
Pste1g02447 1552 Pfam RNA polymerase Rpb1, domain 2 465 631 IPR000722 GO:0003677|GO:0003899|GO:0006351
Pste1g02447 1552 FunFam DNA-directed RNA polymerase subunit 498 558 - -
Pste1g02447 1552 SMART rpolaneu7 302 659 IPR006592 GO:0003677|GO:0003899|GO:0006351
Pste1g02447 1552 CDD RNAP_III_RPC1_N 88 1000 IPR035697 -
Pste1g02447 1552 Gene3D - 812 929 IPR038120 -
Pste1g02447 1552 Pfam RNA polymerase Rpb1, domain 3 634 812 IPR007066 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02447 Pste-Chr1 8896127 8924686 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02447 1 8896127 8924686 Pste1g02447 1 8896127 8924686 ECH